RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 NAA16Q6N069 864 aaPredicted RBP12.12□□□□□ -0.47
SRGAP3-207ENST00000485983 SREK1Q8WXA9 508 aaKnown RBP12.12□□□□□ -0.47
SRGAP3-207ENST00000485983 EFCAB5A4FU69 1503 aa12.12□□□□□ -0.47
SRGAP3-207ENST00000485983 PI4KAP2A4QPH2 592 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 BMP15O95972 392 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 PI4KAP1Q8N8J0 262 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 ZNF608Q9ULD9 1512 aaPredicted RBP12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 CCDC141Q6ZP82 1450 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 URI1O94763 535 aaPredicted RBP12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 PLCG2P16885 1265 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 MCM5P33992 734 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 RMND1Q9NWS8 449 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 HMG20BQ9P0W2 317 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 BCCIPQ9P287 314 aaKnown RBP eCLIP12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 TNNI2P48788 182 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 IFIT1BQ5T764 474 aaKnown RBP12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 NEK1Q96PY6 1258 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 MMRN2Q9H8L6 949 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 CNNM2Q9H8M5 875 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 SYCE3A1L190 88 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 KIF18AQ8NI77 898 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 BACH2Q9BYV9 841 aa12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 DDX19AQ9NUU7 478 aaKnown RBP12.11□□□□□ -0.47
SRGAP3-207ENST00000485983 ATP2B3Q16720 1220 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 CCDC102BQ68D86 513 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 PPP1R14CQ8TAE6 165 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 HECW1Q76N89 1606 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 MCM4P33991 863 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 ARL1P40616 181 aaPredicted RBP12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 PANK2Q9BZ23 570 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 SLC4A4Q9Y6R1 1079 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 SPAG5Q96R06 1193 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 PRXQ9BXM0 1461 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 CDK13Q14004 1512 aaKnown RBP12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 TRIM47Q96LD4 638 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 ADGRL1O94910 1474 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 CAMSAP2Q08AD1 1489 aa12.1□□□□□ -0.47
SRGAP3-207ENST00000485983 CCDC184Q52MB2 194 aa12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 RARSP54136 660 aaKnown RBP12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 ACEP12821 1306 aa12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 SPDYE3A6NKU9 549 aa12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 CCDC175P0C221 793 aa12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 RBM10P98175 930 aaKnown RBP12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 KIAA0753Q2KHM9 967 aa12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 HEATR3Q7Z4Q2 680 aa12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 APBB1IPQ7Z5R6 666 aaPredicted RBP12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 PDCL2Q8N4E4 241 aa12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 OTUD6BQ8N6M0 293 aa12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 RAB3IL1Q8TBN0 382 aa12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 TTC12Q9H892 705 aaPredicted RBP12.09□□□□□ -0.47
SRGAP3-207ENST00000485983 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
SRGAP3-207ENST00000485983 NSFL1CQ9UNZ2 370 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-207ENST00000485983 ZBTB43O43298 467 aa12.08□□□□□ -0.48
SRGAP3-207ENST00000485983 IQSEC3Q9UPP2 1182 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-207ENST00000485983 RFX1P22670 979 aa12.08□□□□□ -0.48
SRGAP3-207ENST00000485983 RBM25P49756 843 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-207ENST00000485983 NAPAP54920 295 aa12.08□□□□□ -0.48
SRGAP3-207ENST00000485983 NOD1Q9Y239 953 aa12.08□□□□□ -0.48
SRGAP3-207ENST00000485983 URB2Q14146 1524 aaKnown RBP12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 AKR1B10O60218 316 aa12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 BRDTQ58F21 947 aaPredicted RBP12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 STK32BQ9NY57 414 aa12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 NDC80O14777 642 aa12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 BIN1O00499 593 aa12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 GSDMDP57764 484 aa12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 RTN1Q16799 776 aa12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 JARID2Q92833 1246 aaPredicted RBP12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 NEMFO60524 1076 aa12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 CALM1P0DP23 149 aa12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 CALM2P0DP24 149 aa12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 CALM3P0DP25 149 aa12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
SRGAP3-207ENST00000485983 STAT6P42226 847 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 STX1AQ16623 288 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 MSANTD4Q8NCY6 345 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 XAGE3Q8WTP9 111 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 KLF18A0A0U1RQI7 1052 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 N4BP3O15049 544 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 DDX23Q9BUQ8 820 aaKnown RBP12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 SH2D4AQ9H788 454 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 RAB11FIP4Q86YS3 637 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 ANKRD2Q9GZV1 360 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 TFIP11Q9UBB9 837 aaKnown RBP12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 DENND4BO75064 1496 aaPredicted RBP12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 GJB2P29033 226 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 IL15P40933 162 aaPredicted RBP12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 EHBP1Q8NDI1 1231 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 FAM212AQ96EL1 285 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 MRVI1Q9Y6F6 885 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 UQCRHLA0A096LP55 91 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 GOLGA6L9A6NEM1 432 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 SLU7O95391 586 aaKnown RBP12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 UQCRHP07919 91 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 IL2RBP14784 551 aa12.06□□□□□ -0.48
SRGAP3-207ENST00000485983 PRPHP41219 470 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms