RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 NBPF6Q5VWK0 638 aa12.03□□□□□ -0.48
COL8A1-207ENST00000483969 RIC3Q7Z5B4 369 aa12.03□□□□□ -0.48
COL8A1-207ENST00000483969 FAM174AQ8TBP5 190 aa12.03□□□□□ -0.48
COL8A1-207ENST00000483969 NBPF4Q96M43 638 aa12.03□□□□□ -0.48
COL8A1-207ENST00000483969 USP54Q70EL1 1684 aa12.03□□□□□ -0.48
COL8A1-207ENST00000483969 F12P00748 615 aaPredicted RBP12.02□□□□□ -0.49
COL8A1-207ENST00000483969 DDX10Q13206 875 aaKnown RBP12.02□□□□□ -0.49
COL8A1-207ENST00000483969 STK17AQ9UEE5 414 aa12.02□□□□□ -0.49
COL8A1-207ENST00000483969 NRAPQ86VF7 1730 aa12.01□□□□□ -0.49
COL8A1-207ENST00000483969 MTHFSP49914 203 aa12.01□□□□□ -0.49
COL8A1-207ENST00000483969 RAPGEF4Q8WZA2 1011 aa12.01□□□□□ -0.49
COL8A1-207ENST00000483969 COL18A1P39060 1754 aa12□□□□□ -0.49
COL8A1-207ENST00000483969 ADH1CP00326 375 aa12□□□□□ -0.49
COL8A1-207ENST00000483969 TATP17735 454 aaPredicted RBP12□□□□□ -0.49
COL8A1-207ENST00000483969 FAM182BQ5T319 152 aa12□□□□□ -0.49
COL8A1-207ENST00000483969 SLC16A10Q8TF71 515 aa12□□□□□ -0.49
COL8A1-207ENST00000483969 MAP10Q9P2G4 905 aa12□□□□□ -0.49
COL8A1-207ENST00000483969 EIF4A2Q14240 407 aaKnown RBP11.99□□□□□ -0.49
COL8A1-207ENST00000483969 TUSC1Q2TAM9 212 aa11.99□□□□□ -0.49
COL8A1-207ENST00000483969 NPAS3Q8IXF0 933 aa11.99□□□□□ -0.49
COL8A1-207ENST00000483969 NXF1Q9UBU9 619 aaKnown RBP11.99□□□□□ -0.49
COL8A1-207ENST00000483969 PDE4DQ08499 809 aa11.98□□□□□ -0.49
COL8A1-207ENST00000483969 USHBP1Q8N6Y0 703 aa11.98□□□□□ -0.49
COL8A1-207ENST00000483969 MARCH10Q8NA82 808 aaPredicted RBP11.98□□□□□ -0.49
COL8A1-207ENST00000483969 ZCRB1Q8TBF4 217 aaKnown RBP11.98□□□□□ -0.49
COL8A1-207ENST00000483969 CFAP53Q96M91 514 aa11.98□□□□□ -0.49
COL8A1-207ENST00000483969 DISP2A7MBM2 1401 aa11.97□□□□□ -0.49
COL8A1-207ENST00000483969 DIAPH1O60610 1272 aaKnown RBP11.97□□□□□ -0.49
COL8A1-207ENST00000483969 CSPP1Q1MSJ5 1256 aa11.97□□□□□ -0.49
COL8A1-207ENST00000483969 LCE2CQ5TA81 110 aa11.97□□□□□ -0.49
COL8A1-207ENST00000483969 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
COL8A1-207ENST00000483969 DDX54Q8TDD1 881 aaKnown RBP11.97□□□□□ -0.49
COL8A1-207ENST00000483969 TRIM37O94972 964 aa11.96□□□□□ -0.49
COL8A1-207ENST00000483969 IL13P35225 146 aa11.96□□□□□ -0.49
COL8A1-207ENST00000483969 BAG6P46379 1132 aa11.96□□□□□ -0.49
COL8A1-207ENST00000483969 CDK15Q96Q40 435 aa11.96□□□□□ -0.49
COL8A1-207ENST00000483969 SPG7Q9UQ90 795 aa11.96□□□□□ -0.49
COL8A1-207ENST00000483969 TIMP2P16035 220 aa11.95□□□□□ -0.5
COL8A1-207ENST00000483969 PPP2R1AP30153 589 aa11.95□□□□□ -0.5
COL8A1-207ENST00000483969 WDR4P57081 412 aaKnown RBP11.95□□□□□ -0.5
COL8A1-207ENST00000483969 RALBP1Q15311 655 aa11.95□□□□□ -0.5
COL8A1-207ENST00000483969 MRPL14Q6P1L8 145 aaKnown RBP11.95□□□□□ -0.5
COL8A1-207ENST00000483969 ARMC2Q8NEN0 867 aa11.95□□□□□ -0.5
COL8A1-207ENST00000483969 FOXJ1Q92949 421 aa11.95□□□□□ -0.5
COL8A1-207ENST00000483969 APBA3O96018 575 aa11.94□□□□□ -0.5
COL8A1-207ENST00000483969 SCARF1Q14162 830 aa11.94□□□□□ -0.5
COL8A1-207ENST00000483969 BPHLQ86WA6 291 aaPredicted RBP11.94□□□□□ -0.5
COL8A1-207ENST00000483969 ZFP42Q96MM3 310 aa11.94□□□□□ -0.5
COL8A1-207ENST00000483969 LIMD1Q9UGP4 676 aa11.94□□□□□ -0.5
COL8A1-207ENST00000483969 NUDCQ9Y266 331 aa11.94□□□□□ -0.5
COL8A1-207ENST00000483969 KIF20BQ96Q89 1820 aa11.94□□□□□ -0.5
COL8A1-207ENST00000483969 OVOS2A0A0G2JMS6 1433 aa11.94□□□□□ -0.5
COL8A1-207ENST00000483969 IGSF1Q8N6C5 1336 aa11.93□□□□□ -0.5
COL8A1-207ENST00000483969 AGERQ15109 404 aa11.93□□□□□ -0.5
COL8A1-207ENST00000483969 PLEKHO1Q53GL0 409 aaPredicted RBP11.93□□□□□ -0.5
COL8A1-207ENST00000483969 SULT6B1Q6IMI4 303 aa11.93□□□□□ -0.5
COL8A1-207ENST00000483969 HELBQ8NG08 1087 aaPredicted RBP11.93□□□□□ -0.5
COL8A1-207ENST00000483969 TSC1Q92574 1164 aa11.93□□□□□ -0.5
COL8A1-207ENST00000483969 THSD7AQ9UPZ6 1657 aa11.93□□□□□ -0.5
COL8A1-207ENST00000483969 LILRB3O75022 631 aa11.92□□□□□ -0.5
COL8A1-207ENST00000483969 QPCTQ16769 361 aa11.92□□□□□ -0.5
COL8A1-207ENST00000483969 AMOTQ4VCS5 1084 aa11.92□□□□□ -0.5
COL8A1-207ENST00000483969 NBPF14Q5TI25 921 aa11.92□□□□□ -0.5
COL8A1-207ENST00000483969 IRF7Q92985 503 aa11.92□□□□□ -0.5
COL8A1-207ENST00000483969 BCL9O00512 1426 aa11.92□□□□□ -0.5
COL8A1-207ENST00000483969 TNS2Q63HR2 1409 aa11.92□□□□□ -0.5
COL8A1-207ENST00000483969 U2SURPO15042 1029 aaKnown RBP11.91□□□□□ -0.5
COL8A1-207ENST00000483969 NR5A1Q13285 461 aa11.91□□□□□ -0.5
COL8A1-207ENST00000483969 DEFB132Q7Z7B7 95 aa11.91□□□□□ -0.5
COL8A1-207ENST00000483969 PCDH11XQ9BZA7 1347 aa11.9□□□□□ -0.5
COL8A1-207ENST00000483969 PCDH11YQ9BZA8 1340 aa11.9□□□□□ -0.5
COL8A1-207ENST00000483969 LTN1O94822 1766 aa11.9□□□□□ -0.5
COL8A1-207ENST00000483969 ARID5BQ14865 1188 aa11.9□□□□□ -0.5
COL8A1-207ENST00000483969 IFNL2Q8IZJ0 200 aa11.9□□□□□ -0.5
COL8A1-207ENST00000483969 ACSBG1Q96GR2 724 aa11.9□□□□□ -0.5
COL8A1-207ENST00000483969 KLF16Q9BXK1 252 aaPredicted RBP11.9□□□□□ -0.5
COL8A1-207ENST00000483969 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
COL8A1-207ENST00000483969 H3BM21 787 aa11.89□□□□□ -0.51
COL8A1-207ENST00000483969 PLSCR1O15162 318 aa11.89□□□□□ -0.51
COL8A1-207ENST00000483969 CLK2P49760 499 aaKnown RBP11.89□□□□□ -0.51
COL8A1-207ENST00000483969 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
COL8A1-207ENST00000483969 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
COL8A1-207ENST00000483969 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
COL8A1-207ENST00000483969 MEGF6O75095 1541 aa11.88□□□□□ -0.51
COL8A1-207ENST00000483969 CYP27B1O15528 508 aa11.88□□□□□ -0.51
COL8A1-207ENST00000483969 KCNQ2O43526 872 aa11.88□□□□□ -0.51
COL8A1-207ENST00000483969 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
COL8A1-207ENST00000483969 HMOX1P09601 288 aa11.88□□□□□ -0.51
COL8A1-207ENST00000483969 C4orf48Q5BLP8 95 aa11.88□□□□□ -0.51
COL8A1-207ENST00000483969 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
COL8A1-207ENST00000483969 SYTL4Q96C24 671 aaPredicted RBP11.88□□□□□ -0.51
COL8A1-207ENST00000483969 PURBQ96QR8 312 aaKnown RBP11.88□□□□□ -0.51
COL8A1-207ENST00000483969 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
COL8A1-207ENST00000483969 SLC24A3Q9HC58 644 aa11.88□□□□□ -0.51
COL8A1-207ENST00000483969 ANKRD26Q9UPS8 1709 aa11.87□□□□□ -0.51
COL8A1-207ENST00000483969 ZIC2O95409 532 aaPredicted RBP11.87□□□□□ -0.51
COL8A1-207ENST00000483969 PHKG2P15735 406 aa11.87□□□□□ -0.51
COL8A1-207ENST00000483969 EZH2Q15910 746 aaKnown RBP11.87□□□□□ -0.51
COL8A1-207ENST00000483969 C1orf141Q5JVX7 400 aa11.87□□□□□ -0.51
COL8A1-207ENST00000483969 CAMKK2Q96RR4 588 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms