RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 ADAM23O75077 832 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 IGHA2P01877 340 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 RPLP1P05386 114 aaKnown RBP6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 SMCPP49901 116 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 FAM98CQ17RN3 349 aaKnown RBP6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 FOXD4L6Q3SYB3 417 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 TNNI3KQ59H18 835 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 FOXD4L3Q6VB84 417 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 CAPN12Q6ZSI9 719 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 C16orf86Q6ZW13 317 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 KIAA0907Q7Z7F0 614 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 SH3TC2Q8TF17 1288 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 SCG3Q8WXD2 468 aaKnown RBP6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 IRF7Q92985 503 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 CCDC85AQ96PX6 553 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 APBA2Q99767 749 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 SRCIN1Q9C0H9 1055 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 MAP10Q9P2G4 905 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 TTF2Q9UNY4 1162 aaKnown RBP6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 EID1Q9Y6B2 187 aa6.63□□□□□ -1.35
R3HDM1-216ENST00000483065 MYL1P05976 194 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 CTSHP09668 335 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 JUNDP17535 347 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 EPHB1P54762 984 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 MORN1Q5T089 497 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 CLEC4GQ6UXB4 293 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 KRBA2Q6ZNG9 492 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 KRT26Q7Z3Y9 468 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 KIAA0825Q8IV33 1275 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 SEPT12Q8IYM1 358 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 GJD3Q8N144 294 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 CPLX3Q8WVH0 158 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 PPM1EQ8WY54 764 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 IER2Q9BTL4 223 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 SPON2Q9BUD6 331 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 CCDC113Q9H0I3 377 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 RNF19AQ9NV58 838 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 ANAPC4Q9UJX5 808 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 PNMA2Q9UL42 364 aa6.62□□□□□ -1.35
R3HDM1-216ENST00000483065 PMLP29590 882 aa6.61□□□□□ -1.35
R3HDM1-216ENST00000483065 MASP1P48740 699 aa6.61□□□□□ -1.35
R3HDM1-216ENST00000483065 POU5F1BQ06416 359 aa6.61□□□□□ -1.35
R3HDM1-216ENST00000483065 C11orf96Q7Z7L8 435 aa6.61□□□□□ -1.35
R3HDM1-216ENST00000483065 TRIM47Q96LD4 638 aa6.61□□□□□ -1.35
R3HDM1-216ENST00000483065 C12orf49Q9H741 205 aa6.61□□□□□ -1.35
R3HDM1-216ENST00000483065 FAM8A1Q9UBU6 413 aa6.61□□□□□ -1.35
R3HDM1-216ENST00000483065 PLAAQ9Y263 795 aa6.61□□□□□ -1.35
R3HDM1-216ENST00000483065 ATAD2Q6PL18 1390 aa6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 CCNYL3P0C7X3 344 aa6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 CNGA1P29973 690 aa6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 TCEA2Q15560 299 aa6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 TSGA10IPQ3SY00 556 aa6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 PPP4R4Q6NUP7 873 aa6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 WDR75Q8IWA0 830 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 Q8N3U1 123 aa6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 STAG2Q8N3U4 1231 aa6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 FAM13BQ9NYF5 915 aa6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 CDV3Q9UKY7 258 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 SLC27A5Q9Y2P5 690 aa6.6□□□□□ -1.35
R3HDM1-216ENST00000483065 RNF223E7ERA6 249 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 C3orf80F5H4A9 247 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 KLF4O43474 513 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 LGR5O75473 907 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 MAN1A1P33908 653 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 GNALP38405 381 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 NASPP49321 788 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 DHX8Q14562 1220 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 RASA3Q14644 834 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 AMOTL1Q8IY63 956 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 PAF1Q8N7H5 531 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 PURBQ96QR8 312 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 KRTAP17-1Q9BYP8 105 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 ZNF700Q9H0M5 742 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 EVA1BQ9NVM1 165 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 ZNF358Q9NW07 568 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 TMEM260Q9NX78 707 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 PRKAG3Q9UGI9 489 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 MCM8Q9UJA3 840 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 PCDHB11Q9Y5F2 797 aa6.59□□□□□ -1.35
R3HDM1-216ENST00000483065 CCDC189A1A4V9 331 aa6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 IFRD1O00458 451 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 CPNE3O75131 537 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 RLBP1P12271 317 aa6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 HCLS1P14317 486 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 ERMP1Q7Z2K6 904 aa6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 RELL1Q8IUW5 271 aa6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 CHMP7Q8WUX9 453 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 EVI5LQ96CN4 794 aa6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 SETDB2Q96T68 719 aa6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 QTRT2Q9H974 415 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 NXF1Q9UBU9 619 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 POLIQ9UNA4 740 aa6.58□□□□□ -1.36
R3HDM1-216ENST00000483065 EIF1AYO14602 144 aaKnown RBP6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 NPHP1O15259 732 aa6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 PPP1R12BO60237 982 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 LDHAP00338 332 aaKnown RBP6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 FOSP01100 380 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 MAP9Q49MG5 647 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms