RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 ZBTB7BO15156 539 aaPredicted RBP4.7□□□□□ -1.66
USH2A-204ENST00000481786 C21orf2O43822 256 aa4.7□□□□□ -1.66
USH2A-204ENST00000481786 RAD21O60216 631 aa4.7□□□□□ -1.66
USH2A-204ENST00000481786 SKIP12755 728 aa4.7□□□□□ -1.66
USH2A-204ENST00000481786 PSMA6P60900 246 aaKnown RBP4.7□□□□□ -1.66
USH2A-204ENST00000481786 NCOA4Q13772 614 aa4.7□□□□□ -1.66
USH2A-204ENST00000481786 EML3Q32P44 896 aa4.7□□□□□ -1.66
USH2A-204ENST00000481786 ALDH16A1Q8IZ83 802 aa4.7□□□□□ -1.66
USH2A-204ENST00000481786 ABI1Q8IZP0 508 aa4.7□□□□□ -1.66
USH2A-204ENST00000481786 NGLY1Q96IV0 654 aa4.7□□□□□ -1.66
USH2A-204ENST00000481786 MRPL18Q9H0U6 180 aaKnown RBP4.7□□□□□ -1.66
USH2A-204ENST00000481786 FRRS1LQ9P0K9 344 aa4.7□□□□□ -1.66
USH2A-204ENST00000481786 HMX2A2RU54 273 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 WISP1O95388 367 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 WNT11O96014 354 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 HOXA10P31260 410 aaPredicted RBP4.69□□□□□ -1.66
USH2A-204ENST00000481786 SOX11P35716 441 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 HIRAP54198 1017 aaPredicted RBP4.69□□□□□ -1.66
USH2A-204ENST00000481786 NFIAQ12857 509 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 SEMA3FQ13275 785 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 SETDB1Q15047 1291 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 GDF6Q6KF10 455 aaPredicted RBP4.69□□□□□ -1.66
USH2A-204ENST00000481786 DHX32Q7L7V1 743 aaKnown RBP4.69□□□□□ -1.66
USH2A-204ENST00000481786 TRIM42Q8IWZ5 723 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 TPCN2Q8NHX9 752 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 GAS2L2Q8NHY3 880 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 TRPM4Q8TD43 1214 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 IFT43Q96FT9 208 aa4.69□□□□□ -1.66
USH2A-204ENST00000481786 DMGDHQ9UI17 866 aaKnown RBP4.69□□□□□ -1.66
USH2A-204ENST00000481786 KRTAP9-7A8MTY7 169 aa4.68□□□□□ -1.66
USH2A-204ENST00000481786 J3QW42 95 aa4.68□□□□□ -1.66
USH2A-204ENST00000481786 TTC9Q92623 222 aa4.68□□□□□ -1.66
USH2A-204ENST00000481786 COL26A1Q96A83 441 aa4.68□□□□□ -1.66
USH2A-204ENST00000481786 CLUAP1Q96AJ1 413 aa4.68□□□□□ -1.66
USH2A-204ENST00000481786 ALG2Q9H553 416 aa4.68□□□□□ -1.66
USH2A-204ENST00000481786 C7orf69Q9H7B7 122 aa4.68□□□□□ -1.66
USH2A-204ENST00000481786 GSC2O15499 205 aa4.67□□□□□ -1.66
USH2A-204ENST00000481786 PPP1R12BO60237 982 aaPredicted RBP4.67□□□□□ -1.66
USH2A-204ENST00000481786 SASH3O75995 380 aa4.67□□□□□ -1.66
USH2A-204ENST00000481786 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.67□□□□□ -1.66
USH2A-204ENST00000481786 WWC1Q8IX03 1113 aa4.67□□□□□ -1.66
USH2A-204ENST00000481786 FNBP4Q8N3X1 1017 aaPredicted RBP4.67□□□□□ -1.66
USH2A-204ENST00000481786 IL22RA1Q8N6P7 574 aa4.67□□□□□ -1.66
USH2A-204ENST00000481786 TSEN2Q8NCE0 465 aaKnown RBP4.67□□□□□ -1.66
USH2A-204ENST00000481786 GALNT11Q8NCW6 608 aa4.67□□□□□ -1.66
USH2A-204ENST00000481786 EFCC1Q9HA90 598 aa4.67□□□□□ -1.66
USH2A-204ENST00000481786 CCDC180Q9P1Z9 1646 aa4.66□□□□□ -1.66
USH2A-204ENST00000481786 POM121CA8CG34 1229 aa4.66□□□□□ -1.66
USH2A-204ENST00000481786 MAP3K6O95382 1288 aa4.66□□□□□ -1.66
USH2A-204ENST00000481786 EIF2AK2P19525 551 aaKnown RBP4.66□□□□□ -1.66
USH2A-204ENST00000481786 INTS5Q6P9B9 1019 aaKnown RBP4.66□□□□□ -1.66
USH2A-204ENST00000481786 ADAMTS19Q8TE59 1207 aa4.66□□□□□ -1.66
USH2A-204ENST00000481786 KCNK4Q9NYG8 393 aa4.66□□□□□ -1.66
USH2A-204ENST00000481786 USP20Q9Y2K6 914 aa4.66□□□□□ -1.66
USH2A-204ENST00000481786 A6NJR5 290 aa4.65□□□□□ -1.67
USH2A-204ENST00000481786 DHX15O43143 795 aaKnown RBP4.65□□□□□ -1.67
USH2A-204ENST00000481786 GRIK1P39086 918 aa4.65□□□□□ -1.67
USH2A-204ENST00000481786 CLDN10P78369 228 aa4.65□□□□□ -1.67
USH2A-204ENST00000481786 GPLD1P80108 840 aa4.65□□□□□ -1.67
USH2A-204ENST00000481786 COL19A1Q14993 1142 aa4.65□□□□□ -1.67
USH2A-204ENST00000481786 CCDC102BQ68D86 513 aa4.65□□□□□ -1.67
USH2A-204ENST00000481786 RNF43Q68DV7 783 aa4.65□□□□□ -1.67
USH2A-204ENST00000481786 NFXL1Q6ZNB6 911 aa4.65□□□□□ -1.67
USH2A-204ENST00000481786 PROSER2Q86WR7 435 aaPredicted RBP4.65□□□□□ -1.67
USH2A-204ENST00000481786 SHKBP1Q8TBC3 707 aa4.65□□□□□ -1.67
USH2A-204ENST00000481786 CHMP7Q8WUX9 453 aaPredicted RBP4.65□□□□□ -1.67
USH2A-204ENST00000481786 RB1CC1Q8TDY2 1594 aa4.65□□□□□ -1.67
USH2A-204ENST00000481786 LGR5O75473 907 aa4.64□□□□□ -1.67
USH2A-204ENST00000481786 RARAP10276 462 aa4.64□□□□□ -1.67
USH2A-204ENST00000481786 INPP5BP32019 993 aa4.64□□□□□ -1.67
USH2A-204ENST00000481786 POU5F2Q8N7G0 328 aa4.64□□□□□ -1.67
USH2A-204ENST00000481786 PLD4Q96BZ4 506 aa4.64□□□□□ -1.67
USH2A-204ENST00000481786 DBNDD2Q9BQY9 259 aa4.64□□□□□ -1.67
USH2A-204ENST00000481786 C2orf49Q9BVC5 232 aaPredicted RBP4.64□□□□□ -1.67
USH2A-204ENST00000481786 TRIM33Q9UPN9 1127 aa4.64□□□□□ -1.67
USH2A-204ENST00000481786 CHMP3Q9Y3E7 222 aa4.64□□□□□ -1.67
USH2A-204ENST00000481786 USP17L5A8MUK1 530 aa4.63□□□□□ -1.67
USH2A-204ENST00000481786 TGFBR3LH3BV60 316 aa4.63□□□□□ -1.67
USH2A-204ENST00000481786 IDH3AP50213 366 aa4.63□□□□□ -1.67
USH2A-204ENST00000481786 ZNF124Q15973 351 aa4.63□□□□□ -1.67
USH2A-204ENST00000481786 PCSK7Q16549 785 aa4.63□□□□□ -1.67
USH2A-204ENST00000481786 HDGFL1Q5TGJ6 251 aa4.63□□□□□ -1.67
USH2A-204ENST00000481786 TXNDC11Q6PKC3 985 aa4.63□□□□□ -1.67
USH2A-204ENST00000481786 NFATC2IPQ8NCF5 419 aa4.63□□□□□ -1.67
USH2A-204ENST00000481786 CCER1Q8TC90 406 aaPredicted RBP4.63□□□□□ -1.67
USH2A-204ENST00000481786 UTP4Q969X6 686 aaKnown RBP4.63□□□□□ -1.67
USH2A-204ENST00000481786 KLK14Q9P0G3 267 aa4.63□□□□□ -1.67
USH2A-204ENST00000481786 ATAD2Q6PL18 1390 aa4.63□□□□□ -1.67
USH2A-204ENST00000481786 TM4SF5O14894 197 aa4.62□□□□□ -1.67
USH2A-204ENST00000481786 ZNF648Q5T619 568 aaPredicted RBP4.62□□□□□ -1.67
USH2A-204ENST00000481786 IER5Q5VY09 327 aa4.62□□□□□ -1.67
USH2A-204ENST00000481786 ADAMTSL4Q6UY14 1074 aa4.62□□□□□ -1.67
USH2A-204ENST00000481786 SPOCD1Q6ZMY3 1216 aa4.62□□□□□ -1.67
USH2A-204ENST00000481786 ACAD11Q709F0 780 aa4.62□□□□□ -1.67
USH2A-204ENST00000481786 CBLL1Q75N03 491 aa4.62□□□□□ -1.67
USH2A-204ENST00000481786 SHISA5Q8N114 240 aa4.62□□□□□ -1.67
USH2A-204ENST00000481786 SCG3Q8WXD2 468 aaKnown RBP4.62□□□□□ -1.67
USH2A-204ENST00000481786 FAM46AQ96IP4 442 aaKnown RBP4.62□□□□□ -1.67
USH2A-204ENST00000481786 NSUN5Q96P11 429 aaKnown RBP4.62□□□□□ -1.67
USH2A-204ENST00000481786 UCN2Q96RP3 112 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms