RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 SF3B3Q15393 1217 aaKnown RBP28.79■■■□□ 2.2
SHISA4-203ENST00000481699 RABL6Q3YEC7 729 aaPredicted RBP28.79■■■□□ 2.2
SHISA4-203ENST00000481699 C2CD5Q86YS7 1000 aa28.79■■■□□ 2.2
SHISA4-203ENST00000481699 DDX60Q8IY21 1712 aaKnown RBP28.78■■■□□ 2.2
SHISA4-203ENST00000481699 CSF1RP07333 972 aa28.78■■■□□ 2.2
SHISA4-203ENST00000481699 CCDC57Q2TAC2 916 aa28.78■■■□□ 2.2
SHISA4-203ENST00000481699 C3orf67Q6ZVT6 689 aa28.78■■■□□ 2.2
SHISA4-203ENST00000481699 DDX46Q7L014 1031 aaKnown RBP28.78■■■□□ 2.2
SHISA4-203ENST00000481699 RPAP2Q8IXW5 612 aaPredicted RBP28.78■■■□□ 2.2
SHISA4-203ENST00000481699 SRGAP3O43295 1099 aa28.77■■■□□ 2.2
SHISA4-203ENST00000481699 HMMRO75330 724 aa28.77■■■□□ 2.2
SHISA4-203ENST00000481699 IFIT5Q13325 482 aaKnown RBP28.77■■■□□ 2.2
SHISA4-203ENST00000481699 TAF7LQ5H9L4 462 aa28.77■■■□□ 2.2
SHISA4-203ENST00000481699 CEP85Q6P2H3 762 aa28.77■■■□□ 2.2
SHISA4-203ENST00000481699 RBM17Q96I25 401 aaKnown RBP28.77■■■□□ 2.2
SHISA4-203ENST00000481699 CD2APQ9Y5K6 639 aa28.77■■■□□ 2.2
SHISA4-203ENST00000481699 ANKRD18BA2A2Z9 1011 aa28.76■■■□□ 2.19
SHISA4-203ENST00000481699 ATP8B2P98198 1209 aa28.76■■■□□ 2.19
SHISA4-203ENST00000481699 FAM161AQ3B820 660 aa28.76■■■□□ 2.19
SHISA4-203ENST00000481699 GREM2Q9H772 168 aa28.76■■■□□ 2.19
SHISA4-203ENST00000481699 KLRG2A4D1S0 409 aaPredicted RBP28.75■■■□□ 2.19
SHISA4-203ENST00000481699 NPR1P16066 1061 aa28.75■■■□□ 2.19
SHISA4-203ENST00000481699 CRY2Q49AN0 593 aa28.75■■■□□ 2.19
SHISA4-203ENST00000481699 ERICH6BQ5W0A0 696 aa28.75■■■□□ 2.19
SHISA4-203ENST00000481699 TNRC6CQ9HCJ0 1690 aaKnown RBP28.74■■■□□ 2.19
SHISA4-203ENST00000481699 ITGA6P23229 1130 aa28.74■■■□□ 2.19
SHISA4-203ENST00000481699 MTX1Q13505 466 aa28.74■■■□□ 2.19
SHISA4-203ENST00000481699 CDC5LQ99459 802 aaKnown RBP28.74■■■□□ 2.19
SHISA4-203ENST00000481699 TGFB2P61812 414 aa28.73■■■□□ 2.19
SHISA4-203ENST00000481699 ZNF622Q969S3 477 aaKnown RBP eCLIP28.73■■■□□ 2.19
SHISA4-203ENST00000481699 MASTLQ96GX5 879 aa28.73■■■□□ 2.19
SHISA4-203ENST00000481699 RTL9Q8NET4 1388 aa28.73■■■□□ 2.19
SHISA4-203ENST00000481699 SRGNP10124 158 aa28.72■■■□□ 2.19
SHISA4-203ENST00000481699 PCDHB15Q9Y5E8 787 aa28.72■■■□□ 2.19
SHISA4-203ENST00000481699 MYH3P11055 1940 aa28.72■■■□□ 2.19
SHISA4-203ENST00000481699 CHRNA5P30532 468 aa28.71■■■□□ 2.19
SHISA4-203ENST00000481699 ANKRD31Q8N7Z5 1873 aa28.71■■■□□ 2.19
SHISA4-203ENST00000481699 PNMA6EA0A0J9YXQ4 647 aa28.7■■■□□ 2.18
SHISA4-203ENST00000481699 ALDH1B1P30837 517 aa28.7■■■□□ 2.18
SHISA4-203ENST00000481699 IGHMBP2P38935 993 aaKnown RBP28.7■■■□□ 2.18
SHISA4-203ENST00000481699 STYK1Q6J9G0 422 aa28.7■■■□□ 2.18
SHISA4-203ENST00000481699 ANKRD18AQ8IVF6 992 aa28.7■■■□□ 2.18
SHISA4-203ENST00000481699 SEC31BQ9NQW1 1179 aa28.7■■■□□ 2.18
SHISA4-203ENST00000481699 HOXA10P31260 410 aaPredicted RBP28.69■■■□□ 2.18
SHISA4-203ENST00000481699 ZNF784Q8NCA9 323 aaPredicted RBP28.69■■■□□ 2.18
SHISA4-203ENST00000481699 CRAMP1Q96RY5 1269 aa28.69■■■□□ 2.18
SHISA4-203ENST00000481699 A0A0G2JLW4 131 aa28.68■■■□□ 2.18
SHISA4-203ENST00000481699 DPEP1P16444 411 aa28.68■■■□□ 2.18
SHISA4-203ENST00000481699 GRAPQ13588 217 aa28.68■■■□□ 2.18
SHISA4-203ENST00000481699 GRAPLQ8TC17 118 aaPredicted RBP28.68■■■□□ 2.18
SHISA4-203ENST00000481699 SSH3Q8TE77 659 aa28.68■■■□□ 2.18
SHISA4-203ENST00000481699 CNKSR1Q969H4 720 aa28.68■■■□□ 2.18
SHISA4-203ENST00000481699 MPHOSPH8Q99549 860 aa28.68■■■□□ 2.18
SHISA4-203ENST00000481699 RWDD1Q9H446 243 aaPredicted RBP28.68■■■□□ 2.18
SHISA4-203ENST00000481699 POLA2Q14181 598 aa28.67■■■□□ 2.18
SHISA4-203ENST00000481699 FHDC1Q9C0D6 1143 aaPredicted RBP28.67■■■□□ 2.18
SHISA4-203ENST00000481699 KIF13BQ9NQT8 1826 aa28.65■■■□□ 2.18
SHISA4-203ENST00000481699 RPS8P62241 208 aaKnown RBP28.65■■■□□ 2.18
SHISA4-203ENST00000481699 OS9Q13438 667 aaPredicted RBP28.65■■■□□ 2.18
SHISA4-203ENST00000481699 SIRT2Q8IXJ6 389 aa28.65■■■□□ 2.18
SHISA4-203ENST00000481699 ZNF594Q96JF6 807 aaPredicted RBP28.65■■■□□ 2.18
SHISA4-203ENST00000481699 TMX4Q9H1E5 349 aaPredicted RBP28.65■■■□□ 2.18
SHISA4-203ENST00000481699 LDHAL6AQ6ZMR3 332 aa28.64■■■□□ 2.18
SHISA4-203ENST00000481699 CELF1Q92879 486 aaKnown RBP28.64■■■□□ 2.18
SHISA4-203ENST00000481699 CNNM1Q9NRU3 951 aa28.64■■■□□ 2.18
SHISA4-203ENST00000481699 SURF6O75683 361 aaKnown RBP28.63■■■□□ 2.17
SHISA4-203ENST00000481699 BBOX1O75936 387 aa28.63■■■□□ 2.17
SHISA4-203ENST00000481699 RFX5P48382 616 aaPredicted RBP28.63■■■□□ 2.17
SHISA4-203ENST00000481699 G3BP1Q13283 466 aaKnown RBP eCLIP28.63■■■□□ 2.17
SHISA4-203ENST00000481699 KLHDC4Q8TBB5 520 aa28.63■■■□□ 2.17
SHISA4-203ENST00000481699 SIL1Q9H173 461 aa28.63■■■□□ 2.17
SHISA4-203ENST00000481699 COPRSQ9NQ92 184 aa28.63■■■□□ 2.17
SHISA4-203ENST00000481699 PIM2Q9P1W9 311 aa28.63■■■□□ 2.17
SHISA4-203ENST00000481699 PA2G4Q9UQ80 394 aaKnown RBP28.63■■■□□ 2.17
SHISA4-203ENST00000481699 PPEF1O14829 653 aaPredicted RBP28.62■■■□□ 2.17
SHISA4-203ENST00000481699 PTPN12Q05209 780 aaKnown RBP28.62■■■□□ 2.17
SHISA4-203ENST00000481699 HDAC1Q13547 482 aaPredicted RBP28.62■■■□□ 2.17
SHISA4-203ENST00000481699 HSP90AB4PQ58FF6 505 aa28.62■■■□□ 2.17
SHISA4-203ENST00000481699 TMC4Q7Z404 712 aa28.62■■■□□ 2.17
SHISA4-203ENST00000481699 TTLL6Q8N841 843 aa28.62■■■□□ 2.17
SHISA4-203ENST00000481699 CCDC136Q96JN2 1154 aa28.62■■■□□ 2.17
SHISA4-203ENST00000481699 COL11A2P13942 1736 aaPredicted RBP28.62■■■□□ 2.17
SHISA4-203ENST00000481699 PPP4R2Q9NY27 417 aa28.61■■■□□ 2.17
SHISA4-203ENST00000481699 NLGN2Q8NFZ4 835 aa28.6■■■□□ 2.17
SHISA4-203ENST00000481699 FBXO3Q9UK99 471 aa28.6■■■□□ 2.17
SHISA4-203ENST00000481699 EYA2O00167 538 aa28.59■■■□□ 2.17
SHISA4-203ENST00000481699 PRPF40BQ6NWY9 871 aaKnown RBP28.59■■■□□ 2.17
SHISA4-203ENST00000481699 BSDC1Q9NW68 430 aaPredicted RBP28.59■■■□□ 2.17
SHISA4-203ENST00000481699 UTRNP46939 3433 aa28.59■■■□□ 2.17
SHISA4-203ENST00000481699 KCNA3P22001 575 aa28.58■■■□□ 2.17
SHISA4-203ENST00000481699 DALRD3Q5D0E6 543 aaKnown RBP28.58■■■□□ 2.17
SHISA4-203ENST00000481699 SYT17Q9BSW7 474 aa28.58■■■□□ 2.17
SHISA4-203ENST00000481699 CIAO1O76071 339 aa28.57■■■□□ 2.16
SHISA4-203ENST00000481699 EXOC6BQ9Y2D4 811 aa28.57■■■□□ 2.16
SHISA4-203ENST00000481699 IL15P40933 162 aaPredicted RBP28.56■■■□□ 2.16
SHISA4-203ENST00000481699 ERC1Q8IUD2 1116 aa28.56■■■□□ 2.16
SHISA4-203ENST00000481699 PUS3Q9BZE2 481 aaKnown RBP28.56■■■□□ 2.16
SHISA4-203ENST00000481699 ZBTB47Q9UFB7 747 aaPredicted RBP28.56■■■□□ 2.16
SHISA4-203ENST00000481699 NOP58Q9Y2X3 529 aaKnown RBP28.56■■■□□ 2.16
SHISA4-203ENST00000481699 LRRC24Q50LG9 513 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms