RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 DOC2BQ14184 412 aa6.9□□□□□ -1.3
CBX3-207ENST00000481300 PRIMPOLQ96LW4 560 aa6.9□□□□□ -1.3
CBX3-207ENST00000481300 DNAJB12Q9NXW2 375 aaKnown RBP6.9□□□□□ -1.3
CBX3-207ENST00000481300 LILRB5O75023 590 aa6.89□□□□□ -1.31
CBX3-207ENST00000481300 SSFA2P28290 1259 aa6.89□□□□□ -1.31
CBX3-207ENST00000481300 NUDT8Q8WV74 236 aa6.89□□□□□ -1.31
CBX3-207ENST00000481300 MYO19Q96H55 970 aa6.89□□□□□ -1.31
CBX3-207ENST00000481300 PNMA5Q96PV4 448 aa6.89□□□□□ -1.31
CBX3-207ENST00000481300 LRFN2Q9ULH4 789 aa6.89□□□□□ -1.31
CBX3-207ENST00000481300 TRIM28Q13263 835 aaKnown RBP6.88□□□□□ -1.31
CBX3-207ENST00000481300 GRIK4Q16099 956 aa6.88□□□□□ -1.31
CBX3-207ENST00000481300 JPH1Q9HDC5 661 aaPredicted RBP6.88□□□□□ -1.31
CBX3-207ENST00000481300 CXXC1Q9P0U4 656 aaPredicted RBP6.88□□□□□ -1.31
CBX3-207ENST00000481300 ZFATQ9P243 1243 aa6.88□□□□□ -1.31
CBX3-207ENST00000481300 MTMR7Q9Y216 660 aa6.88□□□□□ -1.31
CBX3-207ENST00000481300 MICAL2O94851 1124 aa6.87□□□□□ -1.31
CBX3-207ENST00000481300 APBA3O96018 575 aa6.87□□□□□ -1.31
CBX3-207ENST00000481300 EPB42P16452 691 aa6.87□□□□□ -1.31
CBX3-207ENST00000481300 ARSDP51689 593 aa6.87□□□□□ -1.31
CBX3-207ENST00000481300 TRIM26Q12899 539 aaPredicted RBP6.87□□□□□ -1.31
CBX3-207ENST00000481300 FKBP5Q13451 457 aaPredicted RBP6.87□□□□□ -1.31
CBX3-207ENST00000481300 OCLNQ16625 522 aa6.87□□□□□ -1.31
CBX3-207ENST00000481300 C11orf91Q3C1V1 193 aa6.87□□□□□ -1.31
CBX3-207ENST00000481300 TRAPPC3LQ5T215 181 aa6.87□□□□□ -1.31
CBX3-207ENST00000481300 PSAPL1Q6NUJ1 521 aa6.87□□□□□ -1.31
CBX3-207ENST00000481300 ILDR2Q71H61 639 aa6.87□□□□□ -1.31
CBX3-207ENST00000481300 VTI1AQ96AJ9 217 aa6.87□□□□□ -1.31
CBX3-207ENST00000481300 SLAIN2Q9P270 581 aa6.87□□□□□ -1.31
CBX3-207ENST00000481300 A0A0A0MRY4 1105 aa6.86□□□□□ -1.31
CBX3-207ENST00000481300 OPLAHO14841 1288 aa6.86□□□□□ -1.31
CBX3-207ENST00000481300 MAP3K6O95382 1288 aa6.86□□□□□ -1.31
CBX3-207ENST00000481300 ARID4AP29374 1257 aaPredicted RBP6.86□□□□□ -1.31
CBX3-207ENST00000481300 AFF1P51825 1210 aaKnown RBP6.86□□□□□ -1.31
CBX3-207ENST00000481300 KRT25Q7Z3Z0 450 aa6.86□□□□□ -1.31
CBX3-207ENST00000481300 CCER1Q8TC90 406 aaPredicted RBP6.86□□□□□ -1.31
CBX3-207ENST00000481300 IFT43Q96FT9 208 aa6.86□□□□□ -1.31
CBX3-207ENST00000481300 USP20Q9Y2K6 914 aa6.86□□□□□ -1.31
CBX3-207ENST00000481300 ZBTB42B2RXF5 422 aa6.85□□□□□ -1.31
CBX3-207ENST00000481300 TARSP26639 723 aaKnown RBP6.85□□□□□ -1.31
CBX3-207ENST00000481300 RSPO4Q2I0M5 234 aaPredicted RBP6.85□□□□□ -1.31
CBX3-207ENST00000481300 COX20Q5RI15 118 aa6.85□□□□□ -1.31
CBX3-207ENST00000481300 XP32Q5T750 250 aa6.85□□□□□ -1.31
CBX3-207ENST00000481300 MKNK1Q9BUB5 465 aa6.85□□□□□ -1.31
CBX3-207ENST00000481300 SEMA6BQ9H3T3 888 aa6.85□□□□□ -1.31
CBX3-207ENST00000481300 TPSG1Q9NRR2 321 aa6.85□□□□□ -1.31
CBX3-207ENST00000481300 PTCD1O75127 700 aaKnown RBP6.84□□□□□ -1.31
CBX3-207ENST00000481300 SASH3O75995 380 aa6.84□□□□□ -1.31
CBX3-207ENST00000481300 CPB1P15086 417 aa6.84□□□□□ -1.31
CBX3-207ENST00000481300 SELPP16109 830 aa6.84□□□□□ -1.31
CBX3-207ENST00000481300 NKAPLQ5M9Q1 402 aa6.84□□□□□ -1.31
CBX3-207ENST00000481300 PHLDB3Q6NSJ2 640 aa6.84□□□□□ -1.31
CBX3-207ENST00000481300 DHX32Q7L7V1 743 aaKnown RBP6.84□□□□□ -1.31
CBX3-207ENST00000481300 FAM35AQ86V20 835 aa6.84□□□□□ -1.31
CBX3-207ENST00000481300 TRPM4Q8TD43 1214 aa6.84□□□□□ -1.31
CBX3-207ENST00000481300 NACC1Q96RE7 527 aa6.84□□□□□ -1.31
CBX3-207ENST00000481300 LPIN3Q9BQK8 851 aa6.84□□□□□ -1.31
CBX3-207ENST00000481300 C11orf16Q9NQ32 467 aa6.84□□□□□ -1.31
CBX3-207ENST00000481300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.84□□□□□ -1.31
CBX3-207ENST00000481300 RTCBQ9Y3I0 505 aaKnown RBP6.84□□□□□ -1.31
CBX3-207ENST00000481300 IVNS1ABPQ9Y6Y0 642 aa6.84□□□□□ -1.31
CBX3-207ENST00000481300 RGS9O75916 674 aaPredicted RBP6.83□□□□□ -1.32
CBX3-207ENST00000481300 RARAP10276 462 aa6.83□□□□□ -1.32
CBX3-207ENST00000481300 ELNP15502 786 aa6.83□□□□□ -1.32
CBX3-207ENST00000481300 MLLT1Q03111 559 aaPredicted RBP6.83□□□□□ -1.32
CBX3-207ENST00000481300 PLAURQ03405 335 aa6.83□□□□□ -1.32
CBX3-207ENST00000481300 GRIK5Q16478 980 aa6.83□□□□□ -1.32
CBX3-207ENST00000481300 PERM1Q5SV97 790 aa6.83□□□□□ -1.32
CBX3-207ENST00000481300 TREML1Q86YW5 311 aa6.83□□□□□ -1.32
CBX3-207ENST00000481300 SAP130Q9H0E3 1048 aa6.83□□□□□ -1.32
CBX3-207ENST00000481300 GPLD1P80108 840 aa6.82□□□□□ -1.32
CBX3-207ENST00000481300 SHISA2Q6UWI4 295 aa6.82□□□□□ -1.32
CBX3-207ENST00000481300 DMRTC2Q8IXT2 367 aaPredicted RBP6.82□□□□□ -1.32
CBX3-207ENST00000481300 GNEQ9Y223 722 aaKnown RBP6.82□□□□□ -1.32
CBX3-207ENST00000481300 C9orf172C9J069 976 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 EGFRP00533 1210 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 SCNN1AP37088 669 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 RAC1P63000 192 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 ADGRE1Q14246 886 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 MBTPS1Q14703 1052 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 PCSK7Q16549 785 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 FAM26DQ5JW98 314 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 CAPN12Q6ZSI9 719 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 TXNDC2Q86VQ3 553 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 ETFBKMTQ8IXQ9 262 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 RGL4Q8IZJ4 473 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 FMR1NBQ8N0W7 255 aaPredicted RBP6.81□□□□□ -1.32
CBX3-207ENST00000481300 Q8N3U1 123 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 COL26A1Q96A83 441 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 FRRS1LQ9P0K9 344 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 KCNMB2Q9Y691 235 aa6.81□□□□□ -1.32
CBX3-207ENST00000481300 XYLBO75191 536 aa6.8□□□□□ -1.32
CBX3-207ENST00000481300 ABL1P00519 1130 aa6.8□□□□□ -1.32
CBX3-207ENST00000481300 MSL1Q68DK7 614 aa6.8□□□□□ -1.32
CBX3-207ENST00000481300 HFE2Q6ZVN8 426 aa6.8□□□□□ -1.32
CBX3-207ENST00000481300 CMTR1Q8N1G2 835 aaKnown RBP6.8□□□□□ -1.32
CBX3-207ENST00000481300 LENG1Q96BZ8 264 aaPredicted RBP6.8□□□□□ -1.32
CBX3-207ENST00000481300 GZF1Q9H116 711 aaPredicted RBP6.8□□□□□ -1.32
CBX3-207ENST00000481300 DYRK3O43781 588 aa6.79□□□□□ -1.32
CBX3-207ENST00000481300 SERPINB4P48594 390 aa6.79□□□□□ -1.32
CBX3-207ENST00000481300 NRLP54845 237 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms