RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 METAP2P50579 478 aaKnown RBP eCLIP10.94□□□□□ -0.66
GARNL3-216ENST00000481242 ADGRL2O95490 1459 aa10.94□□□□□ -0.66
GARNL3-216ENST00000481242 RNMTO43148 476 aaKnown RBP10.94□□□□□ -0.66
GARNL3-216ENST00000481242 ERMNQ8TAM6 284 aa10.94□□□□□ -0.66
GARNL3-216ENST00000481242 CALM1P0DP23 149 aa10.94□□□□□ -0.66
GARNL3-216ENST00000481242 CALM2P0DP24 149 aa10.94□□□□□ -0.66
GARNL3-216ENST00000481242 CALM3P0DP25 149 aa10.94□□□□□ -0.66
GARNL3-216ENST00000481242 UBA7P41226 1012 aa10.94□□□□□ -0.66
GARNL3-216ENST00000481242 WTAPQ15007 396 aa10.94□□□□□ -0.66
GARNL3-216ENST00000481242 ZRSR2Q15696 482 aaKnown RBP10.94□□□□□ -0.66
GARNL3-216ENST00000481242 JAKMIP3Q5VZ66 844 aa10.94□□□□□ -0.66
GARNL3-216ENST00000481242 TAF4BQ92750 862 aa10.94□□□□□ -0.66
GARNL3-216ENST00000481242 ORC3Q9UBD5 711 aaPredicted RBP10.94□□□□□ -0.66
GARNL3-216ENST00000481242 ERLIN1O75477 346 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 CABLES1Q8TDN4 633 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 ZSCAN16Q9H4T2 348 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-216ENST00000481242 FERMT3Q86UX7 667 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 DISP1Q96F81 1524 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 IRS4O14654 1257 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-216ENST00000481242 CLGNO14967 610 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 ANXA1P04083 346 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
GARNL3-216ENST00000481242 STX8Q9UNK0 236 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 A0A1W2PP64 1363 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 GOLGA6L10A6NI86 522 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 CFAP100Q494V2 611 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 MCMDC2Q4G0Z9 681 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 KIF21AQ7Z4S6 1674 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 TMEM2Q9UHN6 1383 aa10.93□□□□□ -0.66
GARNL3-216ENST00000481242 NEBLO76041 1014 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 TSPY3P0CV98 308 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 TSPY8P0CW00 308 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 TNNI2P48788 182 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 USP37Q86T82 979 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 MEIS3Q99687 375 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 PLEKHG3A1L390 1219 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 RBM25P49756 843 aaKnown RBP10.92□□□□□ -0.66
GARNL3-216ENST00000481242 CCDC183Q5T5S1 534 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 NUCB1Q02818 461 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 SPA17Q15506 151 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 ARHGAP29Q52LW3 1261 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 RBM17Q96I25 401 aaKnown RBP10.92□□□□□ -0.66
GARNL3-216ENST00000481242 SEPT11Q9NVA2 429 aaKnown RBP10.92□□□□□ -0.66
GARNL3-216ENST00000481242 SLAIN2Q9P270 581 aa10.92□□□□□ -0.66
GARNL3-216ENST00000481242 ZBTB43O43298 467 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 SH3TC1Q8TE82 1336 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 USP8P40818 1118 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 FAM114A1Q8IWE2 563 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 CNNM3Q8NE01 707 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 CEP170Q5SW79 1584 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 PDE1AP54750 535 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 TBC1D9Q6ZT07 1266 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 MICU3Q86XE3 530 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 CCDC82Q8N4S0 544 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 C8orf58Q8NAV2 365 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 SH2D4AQ9H788 454 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 NSFL1CQ9UNZ2 370 aaKnown RBP10.91□□□□□ -0.66
GARNL3-216ENST00000481242 SLC4A4Q9Y6R1 1079 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 RAD50Q92878 1312 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 CALML3P27482 149 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 SLC9C2Q5TAH2 1124 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 CACNA2D4Q7Z3S7 1137 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 TTC6Q86TZ1 520 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 HOOK2Q96ED9 719 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 TBC1D2Q9BYX2 928 aa10.91□□□□□ -0.66
GARNL3-216ENST00000481242 MAST3O60307 1309 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 CNBD1Q8NA66 436 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 CCDC191Q8NCU4 936 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 TBC1D32Q96NH3 1257 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 KAT6BQ8WYB5 2073 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 SFPQP23246 707 aaKnown RBP eCLIP10.9□□□□□ -0.66
GARNL3-216ENST00000481242 IFIT1BQ5T764 474 aaKnown RBP10.9□□□□□ -0.66
GARNL3-216ENST00000481242 KIAA1328Q86T90 577 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 PLBD2Q8NHP8 589 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 CCNL1Q9UK58 526 aaPredicted RBP10.9□□□□□ -0.66
GARNL3-216ENST00000481242 MAST1Q9Y2H9 1570 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 INSRP06213 1382 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 ZSCAN12O43309 604 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 VAMP4O75379 141 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 ZNF790Q6PG37 636 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 CCDC112Q8NEF3 446 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 DENND2AQ9ULE3 1009 aa10.9□□□□□ -0.66
GARNL3-216ENST00000481242 DNMT1P26358 1616 aaKnown RBP10.9□□□□□ -0.67
GARNL3-216ENST00000481242 PDE6BP35913 854 aa10.9□□□□□ -0.67
GARNL3-216ENST00000481242 SPC24Q8NBT2 197 aa10.9□□□□□ -0.67
GARNL3-216ENST00000481242 FLAD1Q8NFF5 587 aa10.9□□□□□ -0.67
GARNL3-216ENST00000481242 CFAP74Q9C0B2 1584 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 DYNC1I1O14576 645 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 NEFHP12036 1026 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 LMOD1P29536 600 aaPredicted RBP10.89□□□□□ -0.67
GARNL3-216ENST00000481242 CTR9Q6PD62 1173 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 MAGEB6P1A0A0J9YX57 407 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 GNPATO15228 680 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 STX6O43752 255 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 SEPT7Q16181 437 aaKnown RBP10.89□□□□□ -0.67
GARNL3-216ENST00000481242 TMEM87AQ8NBN3 555 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 PAG1Q9NWQ8 432 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 RMND1Q9NWS8 449 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 ZFYVE16Q7Z3T8 1539 aa10.89□□□□□ -0.67
GARNL3-216ENST00000481242 LDHBP07195 334 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms