RNA–Protein interactions for RNA: ENST00000480698.1

TMEM40-207, Transcript of transmembrane protein 40, humanhuman

TSL 2

Gene TMEM40, Length 507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-207ENST00000480698 COL3A1P02461 1466 aaPredicted RBP12.78□□□□□ -0.36
TMEM40-207ENST00000480698 KIAA0100Q14667 2235 aaKnown RBP12.78□□□□□ -0.36
TMEM40-207ENST00000480698 CEP290O15078 2479 aa12.78□□□□□ -0.36
TMEM40-207ENST00000480698 FAM177BA6PVY3 158 aa12.78□□□□□ -0.36
TMEM40-207ENST00000480698 GPR25O00155 361 aa12.78□□□□□ -0.36
TMEM40-207ENST00000480698 TNIP1Q15025 636 aa12.78□□□□□ -0.36
TMEM40-207ENST00000480698 RPGRQ92834 1020 aaKnown RBP12.78□□□□□ -0.36
TMEM40-207ENST00000480698 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
TMEM40-207ENST00000480698 GNAT3A8MTJ3 354 aa12.77□□□□□ -0.37
TMEM40-207ENST00000480698 RAD17O75943 681 aa12.77□□□□□ -0.37
TMEM40-207ENST00000480698 SUPT20HQ8NEM7 779 aa12.77□□□□□ -0.37
TMEM40-207ENST00000480698 HDAC9Q9UKV0 1011 aa12.77□□□□□ -0.37
TMEM40-207ENST00000480698 ZNF609O15014 1411 aa12.77□□□□□ -0.37
TMEM40-207ENST00000480698 LAMB1P07942 1786 aa12.76□□□□□ -0.37
TMEM40-207ENST00000480698 H7C1D1 291 aa12.76□□□□□ -0.37
TMEM40-207ENST00000480698 TBC1D8O95759 1140 aa12.76□□□□□ -0.37
TMEM40-207ENST00000480698 TM4SF4P48230 202 aa12.76□□□□□ -0.37
TMEM40-207ENST00000480698 INTS3Q68E01 1043 aaKnown RBP12.76□□□□□ -0.37
TMEM40-207ENST00000480698 SAMD7Q7Z3H4 446 aa12.76□□□□□ -0.37
TMEM40-207ENST00000480698 MORC1Q86VD1 984 aa12.76□□□□□ -0.37
TMEM40-207ENST00000480698 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
TMEM40-207ENST00000480698 RBM17Q96I25 401 aaKnown RBP12.76□□□□□ -0.37
TMEM40-207ENST00000480698 BCL2L13Q9BXK5 485 aa12.76□□□□□ -0.37
TMEM40-207ENST00000480698 ANKRD36CQ5JPF3 1778 aa12.76□□□□□ -0.37
TMEM40-207ENST00000480698 ERVV-1B6SEH8 477 aa12.75□□□□□ -0.37
TMEM40-207ENST00000480698 ABCC4O15439 1325 aa12.75□□□□□ -0.37
TMEM40-207ENST00000480698 NTSR2O95665 410 aa12.75□□□□□ -0.37
TMEM40-207ENST00000480698 SNRPA1P09661 255 aaKnown RBP12.75□□□□□ -0.37
TMEM40-207ENST00000480698 LAMB2P55268 1798 aa12.75□□□□□ -0.37
TMEM40-207ENST00000480698 FKBP1BP68106 108 aa12.75□□□□□ -0.37
TMEM40-207ENST00000480698 UNC80Q8N2C7 3258 aa12.75□□□□□ -0.37
TMEM40-207ENST00000480698 DDX60Q8IY21 1712 aaKnown RBP12.74□□□□□ -0.37
TMEM40-207ENST00000480698 GTF2E1P29083 439 aaPredicted RBP12.74□□□□□ -0.37
TMEM40-207ENST00000480698 GAS2L2Q8NHY3 880 aa12.74□□□□□ -0.37
TMEM40-207ENST00000480698 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
TMEM40-207ENST00000480698 PANK3Q9H999 370 aa12.74□□□□□ -0.37
TMEM40-207ENST00000480698 ZBTB12Q9Y330 459 aaPredicted RBP12.74□□□□□ -0.37
TMEM40-207ENST00000480698 RTL9Q8NET4 1388 aa12.73□□□□□ -0.37
TMEM40-207ENST00000480698 MAP3K15Q6ZN16 1313 aa12.73□□□□□ -0.37
TMEM40-207ENST00000480698 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
TMEM40-207ENST00000480698 TBC1D10BQ4KMP7 808 aaPredicted RBP12.73□□□□□ -0.37
TMEM40-207ENST00000480698 SUSD4Q5VX71 490 aa12.73□□□□□ -0.37
TMEM40-207ENST00000480698 SP8Q8IXZ3 490 aa12.73□□□□□ -0.37
TMEM40-207ENST00000480698 KDM3BQ7LBC6 1761 aa12.72□□□□□ -0.37
TMEM40-207ENST00000480698 PSMD14O00487 310 aa12.72□□□□□ -0.37
TMEM40-207ENST00000480698 FKTNO75072 461 aa12.72□□□□□ -0.37
TMEM40-207ENST00000480698 RPS12P25398 132 aaKnown RBP12.72□□□□□ -0.37
TMEM40-207ENST00000480698 SLC10A5Q5PT55 438 aa12.72□□□□□ -0.37
TMEM40-207ENST00000480698 DPP8Q6V1X1 898 aaPredicted RBP12.72□□□□□ -0.37
TMEM40-207ENST00000480698 ZNF34Q8IZ26 560 aa12.72□□□□□ -0.37
TMEM40-207ENST00000480698 ARMC5Q96C12 935 aa12.72□□□□□ -0.37
TMEM40-207ENST00000480698 DCPSQ96C86 337 aaKnown RBP12.72□□□□□ -0.37
TMEM40-207ENST00000480698 R3HDMLQ9H3Y0 253 aa12.72□□□□□ -0.37
TMEM40-207ENST00000480698 GGA3Q9NZ52 723 aa12.72□□□□□ -0.37
TMEM40-207ENST00000480698 ASTN2O75129 1339 aaPredicted RBP12.71□□□□□ -0.37
TMEM40-207ENST00000480698 SCN9AQ15858 1988 aa12.71□□□□□ -0.37
TMEM40-207ENST00000480698 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.37
TMEM40-207ENST00000480698 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
TMEM40-207ENST00000480698 MPNDQ8N594 471 aa12.71□□□□□ -0.37
TMEM40-207ENST00000480698 SLC17A8Q8NDX2 589 aa12.71□□□□□ -0.37
TMEM40-207ENST00000480698 VCANP13611 3396 aa12.71□□□□□ -0.38
TMEM40-207ENST00000480698 SPTBN5Q9NRC6 3674 aaKnown RBP12.71□□□□□ -0.38
TMEM40-207ENST00000480698 BBOX1O75936 387 aa12.7□□□□□ -0.38
TMEM40-207ENST00000480698 OTOP1Q7RTM1 612 aa12.7□□□□□ -0.38
TMEM40-207ENST00000480698 PRO3102Q9H379 93 aa12.7□□□□□ -0.38
TMEM40-207ENST00000480698 DIAPH1O60610 1272 aaKnown RBP12.69□□□□□ -0.38
TMEM40-207ENST00000480698 EN2P19622 333 aaPredicted RBP12.69□□□□□ -0.38
TMEM40-207ENST00000480698 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
TMEM40-207ENST00000480698 SULF1Q8IWU6 871 aa12.69□□□□□ -0.38
TMEM40-207ENST00000480698 PSME4Q14997 1843 aa12.69□□□□□ -0.38
TMEM40-207ENST00000480698 PITPNM2Q9BZ72 1349 aa12.68□□□□□ -0.38
TMEM40-207ENST00000480698 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
TMEM40-207ENST00000480698 NLRP3Q96P20 1036 aa12.68□□□□□ -0.38
TMEM40-207ENST00000480698 GPTP24298 496 aa12.67□□□□□ -0.38
TMEM40-207ENST00000480698 ZNF280AP59817 542 aaPredicted RBP12.67□□□□□ -0.38
TMEM40-207ENST00000480698 TTLL7Q6ZT98 887 aa12.67□□□□□ -0.38
TMEM40-207ENST00000480698 MOB2Q70IA6 237 aa12.67□□□□□ -0.38
TMEM40-207ENST00000480698 TMX4Q9H1E5 349 aaPredicted RBP12.67□□□□□ -0.38
TMEM40-207ENST00000480698 COL4A1P02462 1669 aa12.67□□□□□ -0.38
TMEM40-207ENST00000480698 TAF1P21675 1872 aa12.66□□□□□ -0.38
TMEM40-207ENST00000480698 VIL1P09327 827 aaKnown RBP12.66□□□□□ -0.38
TMEM40-207ENST00000480698 SREBF2Q12772 1141 aa12.66□□□□□ -0.38
TMEM40-207ENST00000480698 GIGYF2Q6Y7W6 1299 aaKnown RBP12.66□□□□□ -0.38
TMEM40-207ENST00000480698 PTPN22Q9Y2R2 807 aa12.66□□□□□ -0.38
TMEM40-207ENST00000480698 TRIM17Q9Y577 477 aa12.66□□□□□ -0.38
TMEM40-207ENST00000480698 H0YGN5 161 aa12.65□□□□□ -0.38
TMEM40-207ENST00000480698 GRAPQ13588 217 aa12.65□□□□□ -0.38
TMEM40-207ENST00000480698 PARP10Q53GL7 1025 aa12.65□□□□□ -0.38
TMEM40-207ENST00000480698 LRP10Q7Z4F1 713 aa12.65□□□□□ -0.38
TMEM40-207ENST00000480698 GRAPLQ8TC17 118 aaPredicted RBP12.65□□□□□ -0.38
TMEM40-207ENST00000480698 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
TMEM40-207ENST00000480698 PHACTR3Q96KR7 559 aa12.65□□□□□ -0.38
TMEM40-207ENST00000480698 DBNDD1Q9H9R9 158 aa12.65□□□□□ -0.38
TMEM40-207ENST00000480698 KCNQ5Q9NR82 932 aa12.65□□□□□ -0.38
TMEM40-207ENST00000480698 CAP1Q01518 475 aa12.64□□□□□ -0.39
TMEM40-207ENST00000480698 RBM26Q5T8P6 1007 aaKnown RBP12.64□□□□□ -0.39
TMEM40-207ENST00000480698 ANGEL2Q5VTE6 544 aaKnown RBP12.64□□□□□ -0.39
TMEM40-207ENST00000480698 TMC4Q7Z404 712 aa12.64□□□□□ -0.39
TMEM40-207ENST00000480698 ZNF333Q96JL9 665 aa12.64□□□□□ -0.39
TMEM40-207ENST00000480698 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms