RNA–Protein interactions for RNA: ENST00000480191.1

GTF3C6-202, Transcript of general transcription factor IIIC subunit 6, humanhuman

TSL 3

Gene GTF3C6, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-202ENST00000480191 USP17L1Q7RTZ2 530 aa7.58□□□□□ -1.2
GTF3C6-202ENST00000480191 FOXD4L4Q8WXT5 416 aaPredicted RBP7.58□□□□□ -1.2
GTF3C6-202ENST00000480191 THAP11Q96EK4 314 aa7.58□□□□□ -1.2
GTF3C6-202ENST00000480191 CCDC136Q96JN2 1154 aa7.58□□□□□ -1.2
GTF3C6-202ENST00000480191 ZMIZ1Q9ULJ6 1067 aa7.58□□□□□ -1.2
GTF3C6-202ENST00000480191 PDZRN3Q9UPQ7 1066 aa7.58□□□□□ -1.2
GTF3C6-202ENST00000480191 GPSM3Q9Y4H4 160 aa7.58□□□□□ -1.2
GTF3C6-202ENST00000480191 KDRP35968 1356 aa7.58□□□□□ -1.2
GTF3C6-202ENST00000480191 USP19O94966 1318 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 FAM196BA6NMK8 535 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L5A8MUK1 530 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 NR1I2O75469 434 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 HMOX1P09601 288 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 SKIP12755 728 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 CANXP27824 592 aaKnown RBP7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 HSPA2P54652 639 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 MCCD1P59942 119 aaPredicted RBP7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 PDE3AQ14432 1141 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 TMEM164Q5U3C3 297 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 GAS2L2Q8NHY3 880 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 GPKOWQ92917 476 aaPredicted RBP eCLIP7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 IFT57Q9NWB7 429 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 MAP10Q9P2G4 905 aa7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 V9GY48 417 aaPredicted RBP7.57□□□□□ -1.2
GTF3C6-202ENST00000480191 IGSF1Q8N6C5 1336 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 FOXO3O43524 673 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 HTATSF1O43719 755 aaKnown RBP7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 HOXC9P31274 260 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 PPP4CP60510 307 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 HSP90AB2PQ58FF8 381 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 SULT6B1Q6IMI4 303 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 KRT28Q7Z3Y7 464 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 SCUBE3Q8IX30 993 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 ARMC2Q8NEN0 867 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 IP6K1Q92551 441 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 ORAI2Q96SN7 254 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 NOVA2Q9UNW9 492 aaKnown RBP7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 FAM208AQ9UK61 1670 aaKnown RBP7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 PLEKHG2Q9H7P9 1386 aa7.56□□□□□ -1.2
GTF3C6-202ENST00000480191 KIF16BQ96L93 1317 aa7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 FANCIQ9NVI1 1328 aa7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 CACNA1FO60840 1977 aa7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 MED1Q15648 1581 aaPredicted RBP7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 TNS3Q68CZ2 1445 aa7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 IPO8O15397 1037 aaKnown RBP7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 FBLN1P23142 703 aa7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 RBM25P49756 843 aaKnown RBP7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 MSS51Q4VC12 460 aa7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 PDXDC2PQ6P474 469 aa7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 RTF1Q92541 710 aaKnown RBP7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 PCDHB3Q9Y5E6 796 aa7.55□□□□□ -1.2
GTF3C6-202ENST00000480191 GCP02774 474 aa7.54□□□□□ -1.2
GTF3C6-202ENST00000480191 APLP1P51693 650 aa7.54□□□□□ -1.2
GTF3C6-202ENST00000480191 RARSP54136 660 aaKnown RBP7.54□□□□□ -1.2
GTF3C6-202ENST00000480191 ALDH1L2Q3SY69 923 aa7.54□□□□□ -1.2
GTF3C6-202ENST00000480191 FAM174AQ8TBP5 190 aa7.54□□□□□ -1.2
GTF3C6-202ENST00000480191 STK32AQ8WU08 396 aa7.54□□□□□ -1.2
GTF3C6-202ENST00000480191 PHACTR3Q96KR7 559 aa7.54□□□□□ -1.2
GTF3C6-202ENST00000480191 CHMP4AQ9BY43 222 aa7.54□□□□□ -1.2
GTF3C6-202ENST00000480191 HPS5Q9UPZ3 1129 aa7.54□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L15C9J2P7 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L10C9JJH3 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L13C9JLJ4 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L12C9JPN9 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L11C9JVI0 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L21D6R901 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L18D6R9N7 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L22D6RA61 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L17D6RBQ6 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L19D6RCP7 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L20D6RJB6 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 ATP5J2-PTCD1G3V325 749 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 CCNYL3P0C7X3 344 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 CTHP32929 405 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 PTK2Q05397 1052 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 USP17L24Q0WX57 530 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 SLFNL1Q499Z3 407 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 NUTM2GQ5VZR2 741 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 CHMP4BQ9H444 224 aaKnown RBP7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 CEP126Q9P2H0 1117 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 STK17AQ9UEE5 414 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 MKRN1Q9UHC7 482 aaKnown RBP7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 TSR3Q9UJK0 312 aaKnown RBP7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 PXDNQ92626 1479 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 CAMTA1Q9Y6Y1 1673 aa7.53□□□□□ -1.2
GTF3C6-202ENST00000480191 SOS1Q07889 1333 aaPredicted RBP7.52□□□□□ -1.2
GTF3C6-202ENST00000480191 DXOO77932 396 aaKnown RBP7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 ZNF853P0CG23 659 aa7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 EXOSC9Q06265 439 aaKnown RBP7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 NBPF14Q5TI25 921 aa7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 ZKSCAN2Q63HK3 967 aa7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 ARHGEF25Q86VW2 580 aa7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 EXOC6Q8TAG9 804 aa7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 CRBNQ96SW2 442 aa7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 SMC4Q9NTJ3 1288 aa7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 EVA1BQ9NVM1 165 aa7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 BABAM1Q9NWV8 329 aa7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 LRRC37A3O60309 1634 aa7.52□□□□□ -1.21
GTF3C6-202ENST00000480191 NCAPD2Q15021 1401 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms