RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 NRXN3Q9Y4C0 1643 aa24.38■■□□□ 1.49
COL13A1-208ENST00000479733 PXDNLA1KZ92 1463 aa24.38■■□□□ 1.49
COL13A1-208ENST00000479733 ERICH4A6NGS2 130 aa24.38■■□□□ 1.49
COL13A1-208ENST00000479733 MAP3K2Q9Y2U5 619 aa24.38■■□□□ 1.49
COL13A1-208ENST00000479733 SPATA31D1Q6ZQQ2 1576 aa24.37■■□□□ 1.49
COL13A1-208ENST00000479733 EIF4A1P60842 406 aaKnown RBP24.37■■□□□ 1.49
COL13A1-208ENST00000479733 FBXO38Q6PIJ6 1188 aa24.37■■□□□ 1.49
COL13A1-208ENST00000479733 C14orf37Q86TY3 774 aa24.37■■□□□ 1.49
COL13A1-208ENST00000479733 KRT222Q8N1A0 295 aa24.37■■□□□ 1.49
COL13A1-208ENST00000479733 HOXC9P31274 260 aa24.37■■□□□ 1.49
COL13A1-208ENST00000479733 KLHDC4Q8TBB5 520 aa24.37■■□□□ 1.49
COL13A1-208ENST00000479733 ZNF397Q8NF99 534 aaPredicted RBP24.36■■□□□ 1.49
COL13A1-208ENST00000479733 ESF1Q9H501 851 aaKnown RBP24.36■■□□□ 1.49
COL13A1-208ENST00000479733 NDUFB9Q9Y6M9 179 aa24.36■■□□□ 1.49
COL13A1-208ENST00000479733 SASH1O94885 1247 aa24.35■■□□□ 1.49
COL13A1-208ENST00000479733 TERF2Q15554 542 aa24.35■■□□□ 1.49
COL13A1-208ENST00000479733 CCAR1Q8IX12 1150 aaKnown RBP24.35■■□□□ 1.49
COL13A1-208ENST00000479733 CHGBP05060 677 aa24.35■■□□□ 1.49
COL13A1-208ENST00000479733 HDGFP51858 240 aaKnown RBP24.35■■□□□ 1.49
COL13A1-208ENST00000479733 RESTQ13127 1097 aa24.35■■□□□ 1.49
COL13A1-208ENST00000479733 G3BP1Q13283 466 aaKnown RBP eCLIP24.35■■□□□ 1.49
COL13A1-208ENST00000479733 ADCY9O60503 1353 aa24.34■■□□□ 1.49
COL13A1-208ENST00000479733 FGD1P98174 961 aa24.34■■□□□ 1.49
COL13A1-208ENST00000479733 BBXQ8WY36 941 aaPredicted RBP24.34■■□□□ 1.49
COL13A1-208ENST00000479733 PROSER3Q2NL68 480 aa24.34■■□□□ 1.49
COL13A1-208ENST00000479733 PDIA4P13667 645 aaKnown RBP24.33■■□□□ 1.49
COL13A1-208ENST00000479733 ERC1Q8IUD2 1116 aa24.33■■□□□ 1.49
COL13A1-208ENST00000479733 NYAP1Q6ZVC0 841 aa24.33■■□□□ 1.48
COL13A1-208ENST00000479733 GOLPH3LQ9H4A5 285 aa24.33■■□□□ 1.48
COL13A1-208ENST00000479733 HIP1O00291 1037 aa24.32■■□□□ 1.48
COL13A1-208ENST00000479733 CDC25BP30305 580 aa24.32■■□□□ 1.48
COL13A1-208ENST00000479733 Q6ZUG5 572 aa24.32■■□□□ 1.48
COL13A1-208ENST00000479733 RBM6P78332 1123 aaKnown RBP24.32■■□□□ 1.48
COL13A1-208ENST00000479733 CCZ1BP86790 482 aa24.32■■□□□ 1.48
COL13A1-208ENST00000479733 CCZ1P86791 482 aaPredicted RBP24.32■■□□□ 1.48
COL13A1-208ENST00000479733 AIMP1Q12904 312 aaKnown RBP24.32■■□□□ 1.48
COL13A1-208ENST00000479733 STX1AQ16623 288 aa24.32■■□□□ 1.48
COL13A1-208ENST00000479733 GTF3C6Q969F1 213 aa24.32■■□□□ 1.48
COL13A1-208ENST00000479733 MRFAP1L1Q96HT8 127 aa24.32■■□□□ 1.48
COL13A1-208ENST00000479733 CFAP45Q9UL16 551 aa24.32■■□□□ 1.48
COL13A1-208ENST00000479733 NAP1L2Q9ULW6 460 aaPredicted RBP24.32■■□□□ 1.48
COL13A1-208ENST00000479733 TECPR2O15040 1411 aa24.31■■□□□ 1.48
COL13A1-208ENST00000479733 GUCY1B3Q02153 619 aa24.31■■□□□ 1.48
COL13A1-208ENST00000479733 CCDC129Q6ZRS4 1044 aa24.31■■□□□ 1.48
COL13A1-208ENST00000479733 CCAR2Q8N163 923 aaKnown RBP24.31■■□□□ 1.48
COL13A1-208ENST00000479733 AOPEPQ8N6M6 819 aa24.31■■□□□ 1.48
COL13A1-208ENST00000479733 NPHP4O75161 1426 aaPredicted RBP24.31■■□□□ 1.48
COL13A1-208ENST00000479733 MTX1Q13505 466 aa24.3■■□□□ 1.48
COL13A1-208ENST00000479733 SUCLG2Q96I99 432 aa24.3■■□□□ 1.48
COL13A1-208ENST00000479733 BICC1Q9H694 974 aaKnown RBP24.3■■□□□ 1.48
COL13A1-208ENST00000479733 BTBD11A6QL63 1104 aa24.3■■□□□ 1.48
COL13A1-208ENST00000479733 TEFQ10587 303 aa24.3■■□□□ 1.48
COL13A1-208ENST00000479733 MPRIPQ6WCQ1 1025 aa24.3■■□□□ 1.48
COL13A1-208ENST00000479733 CCDC9Q9Y3X0 531 aaKnown RBP24.3■■□□□ 1.48
COL13A1-208ENST00000479733 PRAMEF22A3QJZ6 481 aa24.29■■□□□ 1.48
COL13A1-208ENST00000479733 SARM1Q6SZW1 724 aa24.29■■□□□ 1.48
COL13A1-208ENST00000479733 DHX40Q8IX18 779 aaKnown RBP24.29■■□□□ 1.48
COL13A1-208ENST00000479733 NEK1Q96PY6 1258 aa24.29■■□□□ 1.48
COL13A1-208ENST00000479733 CCDC73Q6ZRK6 1079 aa24.29■■□□□ 1.48
COL13A1-208ENST00000479733 ERO1AQ96HE7 468 aa24.29■■□□□ 1.48
COL13A1-208ENST00000479733 BABAM1Q9NWV8 329 aa24.29■■□□□ 1.48
COL13A1-208ENST00000479733 NEMFO60524 1076 aa24.28■■□□□ 1.48
COL13A1-208ENST00000479733 KINO60870 393 aaKnown RBP24.28■■□□□ 1.48
COL13A1-208ENST00000479733 TAF5LO75529 589 aa24.28■■□□□ 1.48
COL13A1-208ENST00000479733 SLU7O95391 586 aaKnown RBP24.28■■□□□ 1.48
COL13A1-208ENST00000479733 ERCC6LQ2NKX8 1250 aa24.28■■□□□ 1.48
COL13A1-208ENST00000479733 KIF13AQ9H1H9 1805 aa24.28■■□□□ 1.48
COL13A1-208ENST00000479733 CAVIN2O95810 425 aa24.28■■□□□ 1.48
COL13A1-208ENST00000479733 TAF3Q5VWG9 929 aa24.28■■□□□ 1.48
COL13A1-208ENST00000479733 LRRN4CLQ8ND94 238 aa24.28■■□□□ 1.48
COL13A1-208ENST00000479733 FMNL2Q96PY5 1086 aa24.28■■□□□ 1.48
COL13A1-208ENST00000479733 SEC62Q99442 399 aaKnown RBP24.28■■□□□ 1.48
COL13A1-208ENST00000479733 ME1P48163 572 aa24.27■■□□□ 1.48
COL13A1-208ENST00000479733 SCRN1Q12765 414 aa24.27■■□□□ 1.48
COL13A1-208ENST00000479733 ABTB2Q8N961 1025 aa24.27■■□□□ 1.48
COL13A1-208ENST00000479733 ZNF446Q9NWS9 450 aa24.27■■□□□ 1.48
COL13A1-208ENST00000479733 CCT2P78371 535 aaKnown RBP24.27■■□□□ 1.48
COL13A1-208ENST00000479733 GORABQ5T7V8 394 aa24.27■■□□□ 1.48
COL13A1-208ENST00000479733 USP28Q96RU2 1077 aa24.27■■□□□ 1.48
COL13A1-208ENST00000479733 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.26■■□□□ 1.47
COL13A1-208ENST00000479733 SYT10Q6XYQ8 523 aa24.26■■□□□ 1.47
COL13A1-208ENST00000479733 KAZALD1Q96I82 304 aa24.26■■□□□ 1.47
COL13A1-208ENST00000479733 ZSCAN16Q9H4T2 348 aaPredicted RBP24.26■■□□□ 1.47
COL13A1-208ENST00000479733 DBF4Q9UBU7 674 aaPredicted RBP24.26■■□□□ 1.47
COL13A1-208ENST00000479733 CACNA1FO60840 1977 aa24.25■■□□□ 1.47
COL13A1-208ENST00000479733 SNW1Q13573 536 aaKnown RBP24.25■■□□□ 1.47
COL13A1-208ENST00000479733 FSIP1Q8NA03 581 aa24.25■■□□□ 1.47
COL13A1-208ENST00000479733 LTKP29376 864 aa24.25■■□□□ 1.47
COL13A1-208ENST00000479733 ADD1P35611 737 aaKnown RBP24.25■■□□□ 1.47
COL13A1-208ENST00000479733 ANO10Q9NW15 660 aa24.25■■□□□ 1.47
COL13A1-208ENST00000479733 SMC2O95347 1197 aa24.24■■□□□ 1.47
COL13A1-208ENST00000479733 HMG20BQ9P0W2 317 aa24.24■■□□□ 1.47
COL13A1-208ENST00000479733 ERBB3P21860 1342 aa24.24■■□□□ 1.47
COL13A1-208ENST00000479733 CEP57L1Q8IYX8 460 aa24.24■■□□□ 1.47
COL13A1-208ENST00000479733 DNAJC2Q99543 621 aaKnown RBP24.24■■□□□ 1.47
COL13A1-208ENST00000479733 SDF4Q9BRK5 362 aa24.24■■□□□ 1.47
COL13A1-208ENST00000479733 GIGYF1O75420 1035 aaPredicted RBP24.24■■□□□ 1.47
COL13A1-208ENST00000479733 KSR2Q6VAB6 950 aa24.24■■□□□ 1.47
COL13A1-208ENST00000479733 NALCNQ8IZF0 1738 aa24.23■■□□□ 1.47
COL13A1-208ENST00000479733 GRM8O00222 908 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms