RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 INTS3Q68E01 1043 aaKnown RBP15.7■□□□□ 0.1
CNKSR3-204ENST00000479339 ZGPATQ8N5A5 531 aaKnown RBP15.7■□□□□ 0.1
CNKSR3-204ENST00000479339 FAM53CQ9NYF3 392 aa15.7■□□□□ 0.1
CNKSR3-204ENST00000479339 IL16Q14005 1332 aa15.69■□□□□ 0.1
CNKSR3-204ENST00000479339 ZNF397Q8NF99 534 aaPredicted RBP15.69■□□□□ 0.1
CNKSR3-204ENST00000479339 SSH1Q8WYL5 1049 aa15.69■□□□□ 0.1
CNKSR3-204ENST00000479339 CAPN2P17655 700 aa15.68■□□□□ 0.1
CNKSR3-204ENST00000479339 SMIM5Q71RC9 77 aa15.68■□□□□ 0.1
CNKSR3-204ENST00000479339 ZFP91Q96JP5 570 aaPredicted RBP15.68■□□□□ 0.1
CNKSR3-204ENST00000479339 CASC1Q6TDU7 716 aa15.68■□□□□ 0.1
CNKSR3-204ENST00000479339 NOB1Q9ULX3 412 aaKnown RBP15.68■□□□□ 0.1
CNKSR3-204ENST00000479339 COL5A3P25940 1745 aaPredicted RBP15.67■□□□□ 0.1
CNKSR3-204ENST00000479339 PTCD1O75127 700 aaKnown RBP15.67■□□□□ 0.1
CNKSR3-204ENST00000479339 ALDH1L2Q3SY69 923 aa15.67■□□□□ 0.1
CNKSR3-204ENST00000479339 TMEM87AQ8NBN3 555 aa15.67■□□□□ 0.1
CNKSR3-204ENST00000479339 CICQ96RK0 1608 aaPredicted RBP15.67■□□□□ 0.1
CNKSR3-204ENST00000479339 TRIM6-TRIM34B2RNG4 842 aa15.67■□□□□ 0.1
CNKSR3-204ENST00000479339 ADRA2BP18089 450 aa15.67■□□□□ 0.1
CNKSR3-204ENST00000479339 TRIM34Q9BYJ4 488 aa15.67■□□□□ 0.1
CNKSR3-204ENST00000479339 KCNF1Q9H3M0 494 aa15.67■□□□□ 0.1
CNKSR3-204ENST00000479339 RTCBQ9Y3I0 505 aaKnown RBP15.67■□□□□ 0.1
CNKSR3-204ENST00000479339 RPS6KA4O75676 772 aa15.66■□□□□ 0.1
CNKSR3-204ENST00000479339 SLFNL1Q499Z3 407 aa15.66■□□□□ 0.1
CNKSR3-204ENST00000479339 INTS4Q96HW7 963 aaKnown RBP15.66■□□□□ 0.1
CNKSR3-204ENST00000479339 PYCARDQ9ULZ3 195 aa15.66■□□□□ 0.1
CNKSR3-204ENST00000479339 BRPF1P55201 1214 aaPredicted RBP15.65■□□□□ 0.1
CNKSR3-204ENST00000479339 EXOSC9Q06265 439 aaKnown RBP15.65■□□□□ 0.1
CNKSR3-204ENST00000479339 ZNF428Q96B54 188 aa15.65■□□□□ 0.1
CNKSR3-204ENST00000479339 GNAT3A8MTJ3 354 aa15.65■□□□□ 0.1
CNKSR3-204ENST00000479339 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
CNKSR3-204ENST00000479339 TRAPPC3LQ5T215 181 aa15.65■□□□□ 0.1
CNKSR3-204ENST00000479339 CCDC112Q8NEF3 446 aa15.65■□□□□ 0.1
CNKSR3-204ENST00000479339 GEMIN8Q9NWZ8 242 aaKnown RBP15.65■□□□□ 0.1
CNKSR3-204ENST00000479339 CD2APQ9Y5K6 639 aa15.65■□□□□ 0.1
CNKSR3-204ENST00000479339 REC8O95072 547 aa15.64■□□□□ 0.09
CNKSR3-204ENST00000479339 MX1P20591 662 aa15.64■□□□□ 0.09
CNKSR3-204ENST00000479339 YY1P25490 414 aa15.64■□□□□ 0.09
CNKSR3-204ENST00000479339 NLGN2Q8NFZ4 835 aa15.64■□□□□ 0.09
CNKSR3-204ENST00000479339 TJP1Q07157 1748 aa15.64■□□□□ 0.09
CNKSR3-204ENST00000479339 CYP2C19P33261 490 aa15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 CUL4AQ13619 759 aa15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 RNF20Q5VTR2 975 aa15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 CTR9Q6PD62 1173 aa15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 PHACTR3Q96KR7 559 aa15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 FEZ2Q9UHY8 353 aaPredicted RBP15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 KCPQ6ZWJ8 1503 aa15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 FCHSD2O94868 740 aa15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 U2AF1L5P0DN76 240 aaPredicted RBP15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 GSPT1P15170 499 aaKnown RBP15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 CRKLP46109 303 aaKnown RBP15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 U2AF1Q01081 240 aaKnown RBP eCLIP15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 SLC39A6Q13433 755 aa15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 TTC22Q5TAA0 569 aa15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 IL17REQ8NFR9 667 aa15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 ARHGEF1Q92888 912 aaKnown RBP15.63■□□□□ 0.09
CNKSR3-204ENST00000479339 HCLS1P14317 486 aaPredicted RBP15.61■□□□□ 0.09
CNKSR3-204ENST00000479339 INTS5Q6P9B9 1019 aaKnown RBP15.61■□□□□ 0.09
CNKSR3-204ENST00000479339 DNAJC10Q8IXB1 793 aa15.61■□□□□ 0.09
CNKSR3-204ENST00000479339 MPNDQ8N594 471 aa15.61■□□□□ 0.09
CNKSR3-204ENST00000479339 CEMIPQ8WUJ3 1361 aa15.61■□□□□ 0.09
CNKSR3-204ENST00000479339 GPR162Q16538 588 aa15.61■□□□□ 0.09
CNKSR3-204ENST00000479339 MYH14Q7Z406 1995 aaKnown RBP15.6■□□□□ 0.09
CNKSR3-204ENST00000479339 RFC4P35249 363 aa15.6■□□□□ 0.09
CNKSR3-204ENST00000479339 MMP14P50281 582 aa15.6■□□□□ 0.09
CNKSR3-204ENST00000479339 TEFQ10587 303 aa15.6■□□□□ 0.09
CNKSR3-204ENST00000479339 NLGN1Q8N2Q7 840 aa15.6■□□□□ 0.09
CNKSR3-204ENST00000479339 TSR2Q969E8 191 aaKnown RBP15.6■□□□□ 0.09
CNKSR3-204ENST00000479339 KIF1BPQ96EK5 621 aa15.6■□□□□ 0.09
CNKSR3-204ENST00000479339 WDR33Q9C0J8 1336 aaKnown RBP15.6■□□□□ 0.09
CNKSR3-204ENST00000479339 ARHGAP45Q92619 1136 aa15.6■□□□□ 0.09
CNKSR3-204ENST00000479339 TMX3Q96JJ7 454 aa15.6■□□□□ 0.09
CNKSR3-204ENST00000479339 CHMP4AQ9BY43 222 aa15.6■□□□□ 0.09
CNKSR3-204ENST00000479339 ERICH4A6NGS2 130 aa15.59■□□□□ 0.09
CNKSR3-204ENST00000479339 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
CNKSR3-204ENST00000479339 CYP19A1P11511 503 aaPredicted RBP15.59■□□□□ 0.09
CNKSR3-204ENST00000479339 GYS1P13807 737 aa15.59■□□□□ 0.09
CNKSR3-204ENST00000479339 MUM1L1Q5H9M0 696 aa15.59■□□□□ 0.09
CNKSR3-204ENST00000479339 PLEKHM2Q8IWE5 1019 aa15.59■□□□□ 0.09
CNKSR3-204ENST00000479339 NOL10Q9BSC4 688 aaKnown RBP15.59■□□□□ 0.09
CNKSR3-204ENST00000479339 CCDC87Q9NVE4 849 aa15.59■□□□□ 0.09
CNKSR3-204ENST00000479339 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.59■□□□□ 0.09
CNKSR3-204ENST00000479339 MMP10P09238 476 aa15.58■□□□□ 0.09
CNKSR3-204ENST00000479339 TNNT1P13805 278 aa15.58■□□□□ 0.09
CNKSR3-204ENST00000479339 USP48Q86UV5 1035 aa15.58■□□□□ 0.09
CNKSR3-204ENST00000479339 FUCA2Q9BTY2 467 aa15.58■□□□□ 0.09
CNKSR3-204ENST00000479339 UBR2Q8IWV8 1755 aa15.58■□□□□ 0.08
CNKSR3-204ENST00000479339 TNNT3P45378 269 aaPredicted RBP15.58■□□□□ 0.08
CNKSR3-204ENST00000479339 UBE2HP62256 183 aa15.58■□□□□ 0.08
CNKSR3-204ENST00000479339 SIPA1L3O60292 1781 aaPredicted RBP15.57■□□□□ 0.08
CNKSR3-204ENST00000479339 SOS1Q07889 1333 aaPredicted RBP15.57■□□□□ 0.08
CNKSR3-204ENST00000479339 USP42Q9H9J4 1324 aaKnown RBP15.57■□□□□ 0.08
CNKSR3-204ENST00000479339 RAD51AP2Q09MP3 1159 aa15.57■□□□□ 0.08
CNKSR3-204ENST00000479339 BMS1Q14692 1282 aaKnown RBP15.57■□□□□ 0.08
CNKSR3-204ENST00000479339 KMT5BQ4FZB7 885 aa15.57■□□□□ 0.08
CNKSR3-204ENST00000479339 ZNF790Q6PG37 636 aa15.57■□□□□ 0.08
CNKSR3-204ENST00000479339 TTC5Q8N0Z6 440 aa15.57■□□□□ 0.08
CNKSR3-204ENST00000479339 SECISBP2LQ93073 1101 aaKnown RBP15.57■□□□□ 0.08
CNKSR3-204ENST00000479339 CHAMP1Q96JM3 812 aa15.57■□□□□ 0.08
CNKSR3-204ENST00000479339 HTATSF1O43719 755 aaKnown RBP15.56■□□□□ 0.08
CNKSR3-204ENST00000479339 GADD45BO75293 160 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms