RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 FOXD4L4Q8WXT5 416 aaPredicted RBP10.1□□□□□ -0.79
USP30-206ENST00000479219 RBSNQ9H1K0 784 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 A0A087WZG4 1122 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 SLC27A2O14975 620 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 MCM5P33992 734 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 PTPN12Q05209 780 aaKnown RBP10.1□□□□□ -0.79
USP30-206ENST00000479219 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
USP30-206ENST00000479219 CCDC183Q5T5S1 534 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 UBE3BQ7Z3V4 1068 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 USP48Q86UV5 1035 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 BOLA2Q9H3K6 86 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 ATG3Q9NT62 314 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 KCPQ6ZWJ8 1503 aa10.09□□□□□ -0.79
USP30-206ENST00000479219 USPL1Q5W0Q7 1092 aa10.09□□□□□ -0.79
USP30-206ENST00000479219 ZCRB1Q8TBF4 217 aaKnown RBP10.09□□□□□ -0.79
USP30-206ENST00000479219 FAM227BQ96M60 508 aa10.09□□□□□ -0.79
USP30-206ENST00000479219 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
USP30-206ENST00000479219 R3HCC1Q9Y3T6 440 aaKnown RBP10.09□□□□□ -0.79
USP30-206ENST00000479219 U3KPZ7 1027 aaPredicted RBP10.09□□□□□ -0.79
USP30-206ENST00000479219 SHANK3Q9BYB0 1731 aa10.09□□□□□ -0.79
USP30-206ENST00000479219 COL5A2P05997 1499 aaPredicted RBP10.09□□□□□ -0.79
USP30-206ENST00000479219 GJB2P29033 226 aa10.09□□□□□ -0.79
USP30-206ENST00000479219 CHRNA2Q15822 529 aa10.09□□□□□ -0.79
USP30-206ENST00000479219 UVSSAQ2YD98 709 aa10.09□□□□□ -0.79
USP30-206ENST00000479219 HAUS7Q99871 368 aa10.09□□□□□ -0.79
USP30-206ENST00000479219 CWC25Q9NXE8 425 aaPredicted RBP10.09□□□□□ -0.79
USP30-206ENST00000479219 TLR7Q9NYK1 1049 aaKnown RBP10.09□□□□□ -0.79
USP30-206ENST00000479219 A0A0D9SFI3 127 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 H7C1W4 665 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 CASP7P55210 303 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 ADCK5Q3MIX3 580 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 EPHA10Q5JZY3 1008 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 CHMP4CQ96CF2 233 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 PRDM11Q9NQV5 511 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 TNS2Q63HR2 1409 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 PALLDQ8WX93 1383 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 HMGB1P09429 215 aaKnown RBP10.08□□□□□ -0.8
USP30-206ENST00000479219 RPS6KB1P23443 525 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 CCDC83Q8IWF9 413 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 CCDC191Q8NCU4 936 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 CABLES1Q8TDN4 633 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 FAM13BQ9NYF5 915 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 DBNLQ9UJU6 430 aaKnown RBP10.08□□□□□ -0.8
USP30-206ENST00000479219 SH3TC1Q8TE82 1336 aa10.08□□□□□ -0.8
USP30-206ENST00000479219 UQCRHLA0A096LP55 91 aa10.07□□□□□ -0.8
USP30-206ENST00000479219 DYNC1I1O14576 645 aa10.07□□□□□ -0.8
USP30-206ENST00000479219 UQCRHP07919 91 aa10.07□□□□□ -0.8
USP30-206ENST00000479219 IL15P40933 162 aaPredicted RBP10.07□□□□□ -0.8
USP30-206ENST00000479219 TFCP2Q12800 502 aa10.07□□□□□ -0.8
USP30-206ENST00000479219 LRRFIP1Q32MZ4 808 aaKnown RBP10.07□□□□□ -0.8
USP30-206ENST00000479219 CCDC39Q9UFE4 941 aa10.07□□□□□ -0.8
USP30-206ENST00000479219 FBXO3Q9UK99 471 aa10.07□□□□□ -0.8
USP30-206ENST00000479219 TAF5LO75529 589 aa10.07□□□□□ -0.8
USP30-206ENST00000479219 CIAO1O76071 339 aa10.07□□□□□ -0.8
USP30-206ENST00000479219 TOM1L2Q6ZVM7 507 aa10.07□□□□□ -0.8
USP30-206ENST00000479219 CARD10Q9BWT7 1032 aa10.07□□□□□ -0.8
USP30-206ENST00000479219 ZKSCAN5Q9Y2L8 839 aa10.07□□□□□ -0.8
USP30-206ENST00000479219 SOS2Q07890 1332 aaPredicted RBP10.07□□□□□ -0.8
USP30-206ENST00000479219 IL2RBP14784 551 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 ME3Q16798 604 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 MCMDC2Q4G0Z9 681 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 BRINP3Q76B58 766 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 DDX17Q92841 729 aaKnown RBP10.06□□□□□ -0.8
USP30-206ENST00000479219 PRDM4Q9UKN5 801 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 NSFL1CQ9UNZ2 370 aaKnown RBP10.06□□□□□ -0.8
USP30-206ENST00000479219 MTMR6Q9Y217 621 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 ELP1O95163 1332 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 SMAP1Q8IYB5 467 aaPredicted RBP10.06□□□□□ -0.8
USP30-206ENST00000479219 KLHDC4Q8TBB5 520 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.06□□□□□ -0.8
USP30-206ENST00000479219 TEX13AQ9BXU3 409 aaPredicted RBP10.06□□□□□ -0.8
USP30-206ENST00000479219 STRCQ7RTU9 1775 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 LARGE1O95461 756 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 KRT85P78386 507 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 LMBR1LQ6UX01 489 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 KBTBD3Q8NAB2 608 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 HELLSQ9NRZ9 838 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 TPCN1Q9ULQ1 816 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 CNPY2Q9Y2B0 182 aa10.06□□□□□ -0.8
USP30-206ENST00000479219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.06□□□□□ -0.8
USP30-206ENST00000479219 CPA1P15085 419 aa10.05□□□□□ -0.8
USP30-206ENST00000479219 FOXO4P98177 505 aa10.05□□□□□ -0.8
USP30-206ENST00000479219 LARP1BQ659C4 914 aaKnown RBP10.05□□□□□ -0.8
USP30-206ENST00000479219 NHSL1Q5SYE7 1610 aa10.05□□□□□ -0.8
USP30-206ENST00000479219 ATP5J2-PTCD1G3V325 749 aa10.05□□□□□ -0.8
USP30-206ENST00000479219 PTCD1O75127 700 aaKnown RBP10.05□□□□□ -0.8
USP30-206ENST00000479219 SASS6Q6UVJ0 657 aa10.05□□□□□ -0.8
USP30-206ENST00000479219 SCAND2PQ9GZW5 306 aaPredicted RBP10.05□□□□□ -0.8
USP30-206ENST00000479219 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.05□□□□□ -0.8
USP30-206ENST00000479219 ZNF609O15014 1411 aa10.05□□□□□ -0.8
USP30-206ENST00000479219 ABCC12Q96J65 1359 aa10.04□□□□□ -0.8
USP30-206ENST00000479219 CHAMP1Q96JM3 812 aa10.04□□□□□ -0.8
USP30-206ENST00000479219 NEK1Q96PY6 1258 aa10.04□□□□□ -0.8
USP30-206ENST00000479219 KIF3AQ9Y496 699 aa10.04□□□□□ -0.8
USP30-206ENST00000479219 LAMA4Q16363 1823 aa10.04□□□□□ -0.8
USP30-206ENST00000479219 VPS37CA5D8V6 355 aaPredicted RBP10.04□□□□□ -0.8
USP30-206ENST00000479219 NBPF26B4DH59 902 aa10.04□□□□□ -0.8
USP30-206ENST00000479219 GADD45BO75293 160 aaPredicted RBP10.04□□□□□ -0.8
USP30-206ENST00000479219 NBPF14Q5TI25 921 aa10.04□□□□□ -0.8
USP30-206ENST00000479219 NBPF10Q6P3W6 841 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms