RNA–Protein interactions for RNA: ENST00000478672.1

CCZ1-204, Transcript of CCZ1 homolog, vacuolar protein trafficking and biogenesis associated, human

TSL 2

Gene CCZ1, Length 2,062 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCZ1-204	ENST00000478672	GREM2	Q9H772	168 aa		33.29	■■■□□ 2.92
CCZ1-204	ENST00000478672	CCDC8	Q9H0W5	538 aa	Predicted RBP	33.28	■■■□□ 2.92
CCZ1-204	ENST00000478672	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.27	■■■□□ 2.92
CCZ1-204	ENST00000478672	EYA2	O00167	538 aa		33.27	■■■□□ 2.92
CCZ1-204	ENST00000478672	CDC45	O75419	566 aa		33.27	■■■□□ 2.92
CCZ1-204	ENST00000478672	ATG9A	Q7Z3C6	839 aa		33.27	■■■□□ 2.92
CCZ1-204	ENST00000478672	ADRA2B	P18089	450 aa		33.27	■■■□□ 2.92
CCZ1-204	ENST00000478672	ITGA6	P23229	1130 aa		33.27	■■■□□ 2.92
CCZ1-204	ENST00000478672	LRRC24	Q50LG9	513 aa		33.27	■■■□□ 2.92
CCZ1-204	ENST00000478672	SETDB2	Q96T68	719 aa		33.27	■■■□□ 2.92
CCZ1-204	ENST00000478672	USP42	Q9H9J4	1324 aa	Known RBP	33.26	■■■□□ 2.92
CCZ1-204	ENST00000478672	IL15	P40933	162 aa	Predicted RBP	33.26	■■■□□ 2.92
CCZ1-204	ENST00000478672	TBC1D9	Q6ZT07	1266 aa		33.26	■■■□□ 2.92
CCZ1-204	ENST00000478672	HSP90B1	P14625	803 aa	Known RBP	33.25	■■■□□ 2.91
CCZ1-204	ENST00000478672	GPATCH3	Q96I76	525 aa		33.25	■■■□□ 2.91
CCZ1-204	ENST00000478672	PUS3	Q9BZE2	481 aa	Known RBP	33.25	■■■□□ 2.91
CCZ1-204	ENST00000478672	ANKRD18B	A2A2Z9	1011 aa		33.25	■■■□□ 2.91
CCZ1-204	ENST00000478672	HMGB2	P26583	209 aa	Known RBP	33.25	■■■□□ 2.91
CCZ1-204	ENST00000478672	UPF2	Q9HAU5	1272 aa	Known RBP	33.24	■■■□□ 2.91
CCZ1-204	ENST00000478672	TRIM6-TRIM34	B2RNG4	842 aa		33.24	■■■□□ 2.91
CCZ1-204	ENST00000478672	CIAO1	O76071	339 aa		33.24	■■■□□ 2.91
CCZ1-204	ENST00000478672	PI4K2B	Q8TCG2	481 aa		33.24	■■■□□ 2.91
CCZ1-204	ENST00000478672	TTC41P	Q6P2S7	1318 aa		33.24	■■■□□ 2.91
CCZ1-204	ENST00000478672	GTF2E1	P29083	439 aa	Predicted RBP	33.23	■■■□□ 2.91
CCZ1-204	ENST00000478672	ANP32A	P39687	249 aa	Known RBP	33.23	■■■□□ 2.91
CCZ1-204	ENST00000478672	MFAP1	P55081	439 aa	Known RBP	33.23	■■■□□ 2.91
CCZ1-204	ENST00000478672	TNNI3K	Q59H18	835 aa		33.23	■■■□□ 2.91
CCZ1-204	ENST00000478672	ECHDC1	Q9NTX5	307 aa		33.23	■■■□□ 2.91
CCZ1-204	ENST00000478672	FPGT-TNNI3K	V9GXZ4	949 aa		33.23	■■■□□ 2.91
CCZ1-204	ENST00000478672	ERFE	Q4G0M1	354 aa		33.22	■■■□□ 2.91
CCZ1-204	ENST00000478672	TLR7	Q9NYK1	1049 aa	Known RBP	33.22	■■■□□ 2.91
CCZ1-204	ENST00000478672	MYH3	P11055	1940 aa		33.22	■■■□□ 2.91
CCZ1-204	ENST00000478672	RILPL2	Q969X0	211 aa		33.22	■■■□□ 2.91
CCZ1-204	ENST00000478672	ERC2	O15083	957 aa		33.21	■■■□□ 2.91
CCZ1-204	ENST00000478672	SSFA2	P28290	1259 aa		33.21	■■■□□ 2.91
CCZ1-204	ENST00000478672	FBXO3	Q9UK99	471 aa		33.21	■■■□□ 2.91
CCZ1-204	ENST00000478672	C4A	P0C0L4	1744 aa		33.2	■■■□□ 2.91
CCZ1-204	ENST00000478672	NBPF5P	Q86XG9	351 aa	Predicted RBP	33.2	■■■□□ 2.91
CCZ1-204	ENST00000478672	GLRX3	O76003	335 aa	Known RBP	33.19	■■■□□ 2.9
CCZ1-204	ENST00000478672	NYX	Q9GZU5	481 aa		33.19	■■■□□ 2.9
CCZ1-204	ENST00000478672	MAP4K4	O95819	1239 aa	Predicted RBP	33.19	■■■□□ 2.9
CCZ1-204	ENST00000478672	UBR3	Q6ZT12	1888 aa		33.18	■■■□□ 2.9
CCZ1-204	ENST00000478672	LDHAL6A	Q6ZMR3	332 aa		33.18	■■■□□ 2.9
CCZ1-204	ENST00000478672	CEP126	Q9P2H0	1117 aa		33.18	■■■□□ 2.9
CCZ1-204	ENST00000478672	CCDC152	Q4G0S7	254 aa		33.17	■■■□□ 2.9
CCZ1-204	ENST00000478672	CASC1	Q6TDU7	716 aa		33.17	■■■□□ 2.9
CCZ1-204	ENST00000478672	CNNM1	Q9NRU3	951 aa		33.16	■■■□□ 2.9
CCZ1-204	ENST00000478672	TFCP2L1	Q9NZI6	479 aa		33.16	■■■□□ 2.9
CCZ1-204	ENST00000478672	DDX60	Q8IY21	1712 aa	Known RBP	33.15	■■■□□ 2.9
CCZ1-204	ENST00000478672	NEUROD6	Q96NK8	337 aa		33.15	■■■□□ 2.9
CCZ1-204	ENST00000478672	DBNL	Q9UJU6	430 aa	Known RBP	33.15	■■■□□ 2.9
CCZ1-204	ENST00000478672	TPTE2	Q6XPS3	522 aa		33.14	■■■□□ 2.9
CCZ1-204	ENST00000478672	GPR108	Q9NPR9	543 aa		33.14	■■■□□ 2.9
CCZ1-204	ENST00000478672	ZNF827	Q17R98	1081 aa		33.14	■■■□□ 2.9
CCZ1-204	ENST00000478672	SEC31B	Q9NQW1	1179 aa		33.14	■■■□□ 2.9
CCZ1-204	ENST00000478672	NFIX	Q14938	502 aa		33.13	■■■□□ 2.89
CCZ1-204	ENST00000478672	DBNDD2	Q9BQY9	259 aa		33.13	■■■□□ 2.89
CCZ1-204	ENST00000478672	NPHP1	O15259	732 aa		33.13	■■■□□ 2.89
CCZ1-204	ENST00000478672	TIMM10	P62072	90 aa		33.13	■■■□□ 2.89
CCZ1-204	ENST00000478672	RIPOR2	Q9Y4F9	1068 aa		33.13	■■■□□ 2.89
CCZ1-204	ENST00000478672	GYS1	P13807	737 aa		33.12	■■■□□ 2.89
CCZ1-204	ENST00000478672	TNS1	Q9HBL0	1735 aa	Known RBP	33.12	■■■□□ 2.89
CCZ1-204	ENST00000478672	METTL24	Q5JXM2	366 aa		33.11	■■■□□ 2.89
CCZ1-204	ENST00000478672	SLC10A5	Q5PT55	438 aa		33.11	■■■□□ 2.89
CCZ1-204	ENST00000478672	CNTROB	Q8N137	903 aa		33.11	■■■□□ 2.89
CCZ1-204	ENST00000478672	C3orf67	Q6ZVT6	689 aa		33.11	■■■□□ 2.89
CCZ1-204	ENST00000478672	CCDC24	Q8N4L8	307 aa		33.11	■■■□□ 2.89
CCZ1-204	ENST00000478672	AKT1S1	Q96B36	256 aa		33.11	■■■□□ 2.89
CCZ1-204	ENST00000478672	TUBGCP6	Q96RT7	1819 aa		33.11	■■■□□ 2.89
CCZ1-204	ENST00000478672	ABCC12	Q96J65	1359 aa		33.1	■■■□□ 2.89
CCZ1-204	ENST00000478672	LAMB2	P55268	1798 aa		33.1	■■■□□ 2.89
CCZ1-204	ENST00000478672	CARMIL3	Q8ND23	1372 aa		33.09	■■■□□ 2.89
CCZ1-204	ENST00000478672		A0A1B0GUL7	405 aa		33.09	■■■□□ 2.89
CCZ1-204	ENST00000478672	TBC1D32	Q96NH3	1257 aa		33.09	■■■□□ 2.89
CCZ1-204	ENST00000478672	MPHOSPH8	Q99549	860 aa		33.09	■■■□□ 2.89
CCZ1-204	ENST00000478672	BOLA2	Q9H3K6	86 aa		33.09	■■■□□ 2.89
CCZ1-204	ENST00000478672	AKAP2	Q9Y2D5	859 aa		33.09	■■■□□ 2.89
CCZ1-204	ENST00000478672	COL24A1	Q17RW2	1714 aa		33.09	■■■□□ 2.89
CCZ1-204	ENST00000478672	C22orf23	Q9BZE7	217 aa		33.08	■■■□□ 2.89
CCZ1-204	ENST00000478672	RTL9	Q8NET4	1388 aa		33.08	■■■□□ 2.89
CCZ1-204	ENST00000478672	MSH5	O43196	834 aa		33.08	■■■□□ 2.89
CCZ1-204	ENST00000478672	SF3B3	Q15393	1217 aa	Known RBP	33.07	■■■□□ 2.88
CCZ1-204	ENST00000478672	ZNF609	O15014	1411 aa		33.07	■■■□□ 2.88
CCZ1-204	ENST00000478672	NLRP3	Q96P20	1036 aa		33.06	■■■□□ 2.88
CCZ1-204	ENST00000478672	EIF5B	O60841	1220 aa	Known RBP	33.06	■■■□□ 2.88
CCZ1-204	ENST00000478672	IGHMBP2	P38935	993 aa	Known RBP	33.06	■■■□□ 2.88
CCZ1-204	ENST00000478672	RIC1	Q4ADV7	1423 aa		33.05	■■■□□ 2.88
CCZ1-204	ENST00000478672	ATP5J	P18859	108 aa		33.05	■■■□□ 2.88
CCZ1-204	ENST00000478672	CHML	P26374	656 aa		33.05	■■■□□ 2.88
CCZ1-204	ENST00000478672	EN1	Q05925	392 aa	Predicted RBP	33.05	■■■□□ 2.88
CCZ1-204	ENST00000478672	CDC5L	Q99459	802 aa	Known RBP	33.04	■■■□□ 2.88
CCZ1-204	ENST00000478672	EZH2	Q15910	746 aa	Known RBP	33.03	■■■□□ 2.88
CCZ1-204	ENST00000478672	CNBD1	Q8NA66	436 aa		33.03	■■■□□ 2.88
CCZ1-204	ENST00000478672	COL23A1	Q86Y22	540 aa	Predicted RBP	33.03	■■■□□ 2.88
CCZ1-204	ENST00000478672	MROH5	Q6ZUA9	1318 aa		33.02	■■■□□ 2.88
CCZ1-204	ENST00000478672	EVI5L	Q96CN4	794 aa		33.02	■■■□□ 2.88
CCZ1-204	ENST00000478672	ATP2B3	Q16720	1220 aa		33.01	■■■□□ 2.88
CCZ1-204	ENST00000478672	TM4SF1	P30408	202 aa		33.01	■■■□□ 2.87
CCZ1-204	ENST00000478672	GORAB	Q5T7V8	394 aa		33.01	■■■□□ 2.87
CCZ1-204	ENST00000478672	HELB	Q8NG08	1087 aa	Predicted RBP	33.01	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms