RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 PRAM1Q96QH2 718 aa9.07□□□□□ -0.96
HOXB3-209ENST00000478644 SCTRP47872 440 aa9.06□□□□□ -0.96
HOXB3-209ENST00000478644 MCM6Q14566 821 aa9.06□□□□□ -0.96
HOXB3-209ENST00000478644 UNC5CLQ8IV45 518 aa9.06□□□□□ -0.96
HOXB3-209ENST00000478644 DCAF11Q8TEB1 546 aa9.06□□□□□ -0.96
HOXB3-209ENST00000478644 OSBPL3Q9H4L5 887 aa9.06□□□□□ -0.96
HOXB3-209ENST00000478644 PCDHB11Q9Y5F2 797 aa9.06□□□□□ -0.96
HOXB3-209ENST00000478644 GPRASP1Q5JY77 1395 aa9.06□□□□□ -0.96
HOXB3-209ENST00000478644 ATRNO75882 1429 aa9.05□□□□□ -0.96
HOXB3-209ENST00000478644 FMN2Q9NZ56 1722 aa9.05□□□□□ -0.96
HOXB3-209ENST00000478644 A0A1W2PRU2 124 aa9.05□□□□□ -0.96
HOXB3-209ENST00000478644 TRIM26Q12899 539 aaPredicted RBP9.05□□□□□ -0.96
HOXB3-209ENST00000478644 LYSMD3Q7Z3D4 306 aa9.05□□□□□ -0.96
HOXB3-209ENST00000478644 CYP2U1Q7Z449 544 aa9.05□□□□□ -0.96
HOXB3-209ENST00000478644 ZSCAN1Q8NBB4 408 aa9.05□□□□□ -0.96
HOXB3-209ENST00000478644 TNS3Q68CZ2 1445 aa9.05□□□□□ -0.96
HOXB3-209ENST00000478644 ITGA6P23229 1130 aa9.04□□□□□ -0.96
HOXB3-209ENST00000478644 WASHC4Q2M389 1173 aa9.04□□□□□ -0.96
HOXB3-209ENST00000478644 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
HOXB3-209ENST00000478644 GDPD2Q9HCC8 539 aa9.04□□□□□ -0.96
HOXB3-209ENST00000478644 ADGRB2O60241 1585 aa9.03□□□□□ -0.96
HOXB3-209ENST00000478644 WASLO00401 505 aaPredicted RBP9.03□□□□□ -0.96
HOXB3-209ENST00000478644 CLN3Q13286 438 aa9.03□□□□□ -0.96
HOXB3-209ENST00000478644 GPR161Q8N6U8 529 aaKnown RBP9.03□□□□□ -0.96
HOXB3-209ENST00000478644 GRIP2Q9C0E4 1043 aa9.03□□□□□ -0.96
HOXB3-209ENST00000478644 RGS12O14924 1447 aa9.03□□□□□ -0.96
HOXB3-209ENST00000478644 MARF1Q9Y4F3 1742 aaKnown RBP9.02□□□□□ -0.96
HOXB3-209ENST00000478644 BCL9LQ86UU0 1499 aa9.02□□□□□ -0.96
HOXB3-209ENST00000478644 BRD4O60885 1362 aaPredicted RBP9.02□□□□□ -0.97
HOXB3-209ENST00000478644 PLEKHH1Q9ULM0 1364 aa9.02□□□□□ -0.97
HOXB3-209ENST00000478644 GNRH1P01148 92 aa9.02□□□□□ -0.97
HOXB3-209ENST00000478644 VPS72Q15906 364 aa9.02□□□□□ -0.97
HOXB3-209ENST00000478644 TRAK1Q9UPV9 953 aa9.02□□□□□ -0.97
HOXB3-209ENST00000478644 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.02□□□□□ -0.97
HOXB3-209ENST00000478644 SLIT2O94813 1529 aa9.01□□□□□ -0.97
HOXB3-209ENST00000478644 ADGRB1O14514 1584 aa9.01□□□□□ -0.97
HOXB3-209ENST00000478644 SF3B2Q13435 895 aaKnown RBP9.01□□□□□ -0.97
HOXB3-209ENST00000478644 NGDNQ8NEJ9 315 aaKnown RBP9.01□□□□□ -0.97
HOXB3-209ENST00000478644 CDCA7Q9BWT1 371 aaPredicted RBP9.01□□□□□ -0.97
HOXB3-209ENST00000478644 TULP4Q9NRJ4 1543 aa9□□□□□ -0.97
HOXB3-209ENST00000478644 FAM181BA6NEQ2 426 aa9□□□□□ -0.97
HOXB3-209ENST00000478644 SOX11P35716 441 aa9□□□□□ -0.97
HOXB3-209ENST00000478644 WDR44Q5JSH3 913 aa9□□□□□ -0.97
HOXB3-209ENST00000478644 KIAA1210Q9ULL0 1709 aa9□□□□□ -0.97
HOXB3-209ENST00000478644 SPATA31C2B4DYI2 1134 aa8.99□□□□□ -0.97
HOXB3-209ENST00000478644 MEN1O00255 615 aa8.99□□□□□ -0.97
HOXB3-209ENST00000478644 ABL2P42684 1182 aa8.99□□□□□ -0.97
HOXB3-209ENST00000478644 KRT76Q01546 638 aa8.99□□□□□ -0.97
HOXB3-209ENST00000478644 XPCQ01831 940 aaPredicted RBP8.99□□□□□ -0.97
HOXB3-209ENST00000478644 VAC14Q08AM6 782 aa8.99□□□□□ -0.97
HOXB3-209ENST00000478644 SAFB2Q14151 953 aaKnown RBP eCLIP8.99□□□□□ -0.97
HOXB3-209ENST00000478644 TSGA10IPQ3SY00 556 aa8.99□□□□□ -0.97
HOXB3-209ENST00000478644 COG6Q9Y2V7 657 aa8.99□□□□□ -0.97
HOXB3-209ENST00000478644 HRH3Q9Y5N1 445 aa8.99□□□□□ -0.97
HOXB3-209ENST00000478644 NWD2Q9ULI1 1742 aa8.99□□□□□ -0.97
HOXB3-209ENST00000478644 USP32Q8NFA0 1604 aa8.98□□□□□ -0.97
HOXB3-209ENST00000478644 MYCP01106 439 aaPredicted RBP8.98□□□□□ -0.97
HOXB3-209ENST00000478644 USP4Q13107 963 aa8.98□□□□□ -0.97
HOXB3-209ENST00000478644 SLFNL1Q499Z3 407 aa8.98□□□□□ -0.97
HOXB3-209ENST00000478644 SV2AQ7L0J3 742 aa8.98□□□□□ -0.97
HOXB3-209ENST00000478644 PRICKLE2Q7Z3G6 844 aa8.98□□□□□ -0.97
HOXB3-209ENST00000478644 NUDT16Q96DE0 195 aaKnown RBP8.98□□□□□ -0.97
HOXB3-209ENST00000478644 GMCL1Q96IK5 515 aa8.98□□□□□ -0.97
HOXB3-209ENST00000478644 NLRP3Q96P20 1036 aa8.98□□□□□ -0.97
HOXB3-209ENST00000478644 ESYT1Q9BSJ8 1104 aa8.98□□□□□ -0.97
HOXB3-209ENST00000478644 ATP7BP35670 1465 aa8.97□□□□□ -0.97
HOXB3-209ENST00000478644 NPM2Q86SE8 214 aaKnown RBP8.97□□□□□ -0.97
HOXB3-209ENST00000478644 VWA5B2Q8N398 1253 aa8.97□□□□□ -0.97
HOXB3-209ENST00000478644 PMFBP1Q8TBY8 1022 aa8.97□□□□□ -0.97
HOXB3-209ENST00000478644 XAGE2Q96GT9 111 aa8.97□□□□□ -0.97
HOXB3-209ENST00000478644 CCDC9Q9Y3X0 531 aaKnown RBP8.97□□□□□ -0.97
HOXB3-209ENST00000478644 DYRK1BQ9Y463 629 aa8.97□□□□□ -0.97
HOXB3-209ENST00000478644 ITSN1Q15811 1721 aa8.97□□□□□ -0.97
HOXB3-209ENST00000478644 BLMP54132 1417 aaPredicted RBP8.97□□□□□ -0.97
HOXB3-209ENST00000478644 RALGAPBQ86X10 1494 aa8.96□□□□□ -0.97
HOXB3-209ENST00000478644 FAM83GA6ND36 823 aa8.96□□□□□ -0.98
HOXB3-209ENST00000478644 MAP7D1Q3KQU3 841 aa8.96□□□□□ -0.98
HOXB3-209ENST00000478644 RNF135Q8IUD6 432 aa8.96□□□□□ -0.98
HOXB3-209ENST00000478644 HIRIP3Q9BW71 556 aaPredicted RBP8.96□□□□□ -0.98
HOXB3-209ENST00000478644 CDK19Q9BWU1 502 aa8.96□□□□□ -0.98
HOXB3-209ENST00000478644 COL25A1Q9BXS0 654 aaPredicted RBP8.96□□□□□ -0.98
HOXB3-209ENST00000478644 ARHGEF10LQ9HCE6 1279 aa8.96□□□□□ -0.98
HOXB3-209ENST00000478644 DOLKQ9UPQ8 538 aa8.96□□□□□ -0.98
HOXB3-209ENST00000478644 POLR3AO14802 1390 aaPredicted RBP8.96□□□□□ -0.98
HOXB3-209ENST00000478644 IL2RAP01589 272 aa8.95□□□□□ -0.98
HOXB3-209ENST00000478644 FLIIQ13045 1269 aa8.95□□□□□ -0.98
HOXB3-209ENST00000478644 NBPF10Q6P3W6 841 aaKnown RBP8.95□□□□□ -0.98
HOXB3-209ENST00000478644 KRT27Q7Z3Y8 459 aa8.95□□□□□ -0.98
HOXB3-209ENST00000478644 NBPF15Q8N660 670 aa8.95□□□□□ -0.98
HOXB3-209ENST00000478644 CNKSR1Q969H4 720 aa8.95□□□□□ -0.98
HOXB3-209ENST00000478644 RGPD8O14715 1765 aaPredicted RBP8.94□□□□□ -0.98
HOXB3-209ENST00000478644 COL14A1Q05707 1796 aaKnown RBP8.94□□□□□ -0.98
HOXB3-209ENST00000478644 CENPCQ03188 943 aa8.94□□□□□ -0.98
HOXB3-209ENST00000478644 NBPF8Q3BBV2 869 aa8.94□□□□□ -0.98
HOXB3-209ENST00000478644 SLC27A3Q5K4L6 730 aa8.94□□□□□ -0.98
HOXB3-209ENST00000478644 NLRP13Q86W25 1043 aa8.94□□□□□ -0.98
HOXB3-209ENST00000478644 PRDM11Q9NQV5 511 aa8.94□□□□□ -0.98
HOXB3-209ENST00000478644 CUEDC1Q9NWM3 386 aaPredicted RBP8.94□□□□□ -0.98
HOXB3-209ENST00000478644 BTG4Q9NY30 223 aa8.94□□□□□ -0.98
HOXB3-209ENST00000478644 THRAP3Q9Y2W1 955 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms