RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 ATCAYQ86WG3 371 aa8.09□□□□□ -1.11
AFF4-208ENST00000478588 MICALL1Q8N3F8 863 aa8.09□□□□□ -1.11
AFF4-208ENST00000478588 ZNF417Q8TAU3 575 aa8.09□□□□□ -1.11
AFF4-208ENST00000478588 TRIM11Q96F44 468 aa8.09□□□□□ -1.11
AFF4-208ENST00000478588 ZNF587Q96SQ5 575 aaPredicted RBP8.09□□□□□ -1.11
AFF4-208ENST00000478588 SLC6A14Q9UN76 642 aa8.09□□□□□ -1.11
AFF4-208ENST00000478588 GNB5O14775 395 aa8.08□□□□□ -1.12
AFF4-208ENST00000478588 RARAP10276 462 aa8.08□□□□□ -1.12
AFF4-208ENST00000478588 ZAP70P43403 619 aa8.08□□□□□ -1.12
AFF4-208ENST00000478588 COL9A3Q14050 684 aaPredicted RBP8.08□□□□□ -1.12
AFF4-208ENST00000478588 C20orf204Q6ZNR8 217 aa8.08□□□□□ -1.12
AFF4-208ENST00000478588 GPR152Q8TDT2 470 aa8.08□□□□□ -1.12
AFF4-208ENST00000478588 GTF3C2Q8WUA4 911 aaPredicted RBP8.08□□□□□ -1.12
AFF4-208ENST00000478588 NUDT8Q8WV74 236 aa8.08□□□□□ -1.12
AFF4-208ENST00000478588 EFCC1Q9HA90 598 aa8.08□□□□□ -1.12
AFF4-208ENST00000478588 NAGPAQ9UK23 515 aa8.08□□□□□ -1.12
AFF4-208ENST00000478588 EGFRP00533 1210 aa8.07□□□□□ -1.12
AFF4-208ENST00000478588 ITGB2P05107 769 aa8.07□□□□□ -1.12
AFF4-208ENST00000478588 MLLT1Q03111 559 aaPredicted RBP8.07□□□□□ -1.12
AFF4-208ENST00000478588 DHX32Q7L7V1 743 aaKnown RBP8.07□□□□□ -1.12
AFF4-208ENST00000478588 PLVAPQ9BX97 442 aa8.07□□□□□ -1.12
AFF4-208ENST00000478588 KRBA1A5PL33 1030 aa8.06□□□□□ -1.12
AFF4-208ENST00000478588 MAP3K6O95382 1288 aa8.06□□□□□ -1.12
AFF4-208ENST00000478588 HFE2Q6ZVN8 426 aa8.06□□□□□ -1.12
AFF4-208ENST00000478588 RETREG2Q8NC44 543 aa8.06□□□□□ -1.12
AFF4-208ENST00000478588 HELQQ8TDG4 1101 aa8.06□□□□□ -1.12
AFF4-208ENST00000478588 C11orf16Q9NQ32 467 aa8.06□□□□□ -1.12
AFF4-208ENST00000478588 MMP20O60882 483 aa8.05□□□□□ -1.12
AFF4-208ENST00000478588 CPB1P15086 417 aa8.05□□□□□ -1.12
AFF4-208ENST00000478588 PLAURQ03405 335 aa8.05□□□□□ -1.12
AFF4-208ENST00000478588 PIK3R5Q8WYR1 880 aa8.05□□□□□ -1.12
AFF4-208ENST00000478588 ANO2Q9NQ90 1003 aa8.05□□□□□ -1.12
AFF4-208ENST00000478588 UBAP1LF5GYI3 381 aa8.04□□□□□ -1.12
AFF4-208ENST00000478588 MPSTP25325 297 aa8.04□□□□□ -1.12
AFF4-208ENST00000478588 PLA2G4EQ3MJ16 856 aa8.04□□□□□ -1.12
AFF4-208ENST00000478588 GPAT2Q6NUI2 795 aa8.04□□□□□ -1.12
AFF4-208ENST00000478588 PSAPL1Q6NUJ1 521 aa8.04□□□□□ -1.12
AFF4-208ENST00000478588 FAM35AQ86V20 835 aa8.04□□□□□ -1.12
AFF4-208ENST00000478588 ABTB2Q8N961 1025 aa8.04□□□□□ -1.12
AFF4-208ENST00000478588 TRPM4Q8TD43 1214 aa8.04□□□□□ -1.12
AFF4-208ENST00000478588 TLR7Q9NYK1 1049 aaKnown RBP8.04□□□□□ -1.12
AFF4-208ENST00000478588 J3QW42 95 aa8.03□□□□□ -1.12
AFF4-208ENST00000478588 NID1P14543 1247 aa8.03□□□□□ -1.12
AFF4-208ENST00000478588 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
AFF4-208ENST00000478588 JPH1Q9HDC5 661 aaPredicted RBP8.03□□□□□ -1.12
AFF4-208ENST00000478588 USTQ9Y2C2 406 aa8.03□□□□□ -1.12
AFF4-208ENST00000478588 FAM229AH3BQW9 127 aa8.02□□□□□ -1.13
AFF4-208ENST00000478588 LILRB5O75023 590 aa8.02□□□□□ -1.13
AFF4-208ENST00000478588 ABL1P00519 1130 aa8.02□□□□□ -1.13
AFF4-208ENST00000478588 NOM1Q5C9Z4 860 aaKnown RBP8.02□□□□□ -1.13
AFF4-208ENST00000478588 PERM1Q5SV97 790 aa8.02□□□□□ -1.13
AFF4-208ENST00000478588 NLRP13Q86W25 1043 aa8.02□□□□□ -1.13
AFF4-208ENST00000478588 EDEM1Q92611 657 aa8.02□□□□□ -1.13
AFF4-208ENST00000478588 PRDM6Q9NQX0 595 aa8.02□□□□□ -1.13
AFF4-208ENST00000478588 A6NHS1 94 aa8.01□□□□□ -1.13
AFF4-208ENST00000478588 EIF1AXP47813 144 aaKnown RBP8.01□□□□□ -1.13
AFF4-208ENST00000478588 AFF1P51825 1210 aaKnown RBP8.01□□□□□ -1.13
AFF4-208ENST00000478588 GPLD1P80108 840 aa8.01□□□□□ -1.13
AFF4-208ENST00000478588 DNM1Q05193 864 aaKnown RBP8.01□□□□□ -1.13
AFF4-208ENST00000478588 ZNF211Q13398 564 aaPredicted RBP8.01□□□□□ -1.13
AFF4-208ENST00000478588 NSUN5Q96P11 429 aaKnown RBP8.01□□□□□ -1.13
AFF4-208ENST00000478588 LPIN3Q9BQK8 851 aa8.01□□□□□ -1.13
AFF4-208ENST00000478588 GGNBP2Q9H3C7 697 aa8.01□□□□□ -1.13
AFF4-208ENST00000478588 FAM13BQ9NYF5 915 aa8.01□□□□□ -1.13
AFF4-208ENST00000478588 LOC102724428A0A0B4J2F2 783 aa8□□□□□ -1.13
AFF4-208ENST00000478588 PIK3R2O00459 728 aa8□□□□□ -1.13
AFF4-208ENST00000478588 RGS9O75916 674 aaPredicted RBP8□□□□□ -1.13
AFF4-208ENST00000478588 PSAPP07602 524 aa8□□□□□ -1.13
AFF4-208ENST00000478588 SIK1P57059 783 aa8□□□□□ -1.13
AFF4-208ENST00000478588 COL13A1Q5TAT6 717 aaPredicted RBP8□□□□□ -1.13
AFF4-208ENST00000478588 NOP53Q9NZM5 478 aaKnown RBP8□□□□□ -1.13
AFF4-208ENST00000478588 SERPINB4P48594 390 aa7.99□□□□□ -1.13
AFF4-208ENST00000478588 NRLP54845 237 aa7.99□□□□□ -1.13
AFF4-208ENST00000478588 GRIK5Q16478 980 aa7.99□□□□□ -1.13
AFF4-208ENST00000478588 TRAPPC3LQ5T215 181 aa7.99□□□□□ -1.13
AFF4-208ENST00000478588 ELMSAN1Q6PJG2 1045 aa7.99□□□□□ -1.13
AFF4-208ENST00000478588 TMEM63CQ9P1W3 806 aa7.99□□□□□ -1.13
AFF4-208ENST00000478588 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.99□□□□□ -1.13
AFF4-208ENST00000478588 PDGFAP04085 211 aa7.98□□□□□ -1.13
AFF4-208ENST00000478588 CYP2E1P05181 493 aaPredicted RBP7.98□□□□□ -1.13
AFF4-208ENST00000478588 NPR3P17342 541 aa7.98□□□□□ -1.13
AFF4-208ENST00000478588 EIF2AK2P19525 551 aaKnown RBP7.98□□□□□ -1.13
AFF4-208ENST00000478588 FKBP4Q02790 459 aaKnown RBP eCLIP7.98□□□□□ -1.13
AFF4-208ENST00000478588 PCSK7Q16549 785 aa7.98□□□□□ -1.13
AFF4-208ENST00000478588 SMG9Q9H0W8 520 aaKnown RBP7.98□□□□□ -1.13
AFF4-208ENST00000478588 POLIQ9UNA4 740 aa7.98□□□□□ -1.13
AFF4-208ENST00000478588 FNDC3AQ9Y2H6 1198 aaKnown RBP7.98□□□□□ -1.13
AFF4-208ENST00000478588 C1QTNF9BB2RNN3 333 aa7.97□□□□□ -1.13
AFF4-208ENST00000478588 CHRNA4P43681 627 aa7.97□□□□□ -1.13
AFF4-208ENST00000478588 AAMPQ13685 434 aa7.97□□□□□ -1.13
AFF4-208ENST00000478588 C8orf34Q49A92 452 aa7.97□□□□□ -1.13
AFF4-208ENST00000478588 ILDR2Q71H61 639 aa7.97□□□□□ -1.13
AFF4-208ENST00000478588 CD163Q86VB7 1156 aa7.97□□□□□ -1.13
AFF4-208ENST00000478588 DMRTC2Q8IXT2 367 aaPredicted RBP7.97□□□□□ -1.13
AFF4-208ENST00000478588 ELP3Q9H9T3 547 aa7.97□□□□□ -1.13
AFF4-208ENST00000478588 CNTN3Q9P232 1028 aa7.97□□□□□ -1.13
AFF4-208ENST00000478588 ARID4AP29374 1257 aaPredicted RBP7.96□□□□□ -1.14
AFF4-208ENST00000478588 GRIK4Q16099 956 aa7.96□□□□□ -1.14
AFF4-208ENST00000478588 TTC39BQ5VTQ0 682 aaPredicted RBP7.96□□□□□ -1.14
AFF4-208ENST00000478588 ALYREFQ86V81 257 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms