RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	BBOX1	O75936	387 aa		14.06	□□□□□ -0.16
APTX-222	ENST00000478279	RAD17	O75943	681 aa		14.06	□□□□□ -0.16
APTX-222	ENST00000478279	KIAA2012	Q0VF49	1180 aa		14.06	□□□□□ -0.16
APTX-222	ENST00000478279	DPP8	Q6V1X1	898 aa	Predicted RBP	14.06	□□□□□ -0.16
APTX-222	ENST00000478279	SP8	Q8IXZ3	490 aa		14.06	□□□□□ -0.16
APTX-222	ENST00000478279	CNOT7	Q9UIV1	285 aa	Known RBP	14.06	□□□□□ -0.16
APTX-222	ENST00000478279	ABCC4	O15439	1325 aa		14.06	□□□□□ -0.16
APTX-222	ENST00000478279		H7C1D1	291 aa		14.05	□□□□□ -0.16
APTX-222	ENST00000478279	EIF4A1	P60842	406 aa	Known RBP	14.05	□□□□□ -0.16
APTX-222	ENST00000478279	USP48	Q86UV5	1035 aa		14.05	□□□□□ -0.16
APTX-222	ENST00000478279	MPND	Q8N594	471 aa		14.05	□□□□□ -0.16
APTX-222	ENST00000478279	RGMB	Q6NW40	437 aa		14.04	□□□□□ -0.16
APTX-222	ENST00000478279	UTP14A	Q9BVJ6	771 aa	Known RBP	14.04	□□□□□ -0.16
APTX-222	ENST00000478279	SAGE1	Q9NXZ1	904 aa		14.04	□□□□□ -0.16
APTX-222	ENST00000478279	KDM3B	Q7LBC6	1761 aa		14.04	□□□□□ -0.16
APTX-222	ENST00000478279	SHTN1	A0MZ66	631 aa		14.03	□□□□□ -0.16
APTX-222	ENST00000478279	FAM155A	B1AL88	458 aa	Predicted RBP	14.03	□□□□□ -0.16
APTX-222	ENST00000478279	ERBB4	Q15303	1308 aa		14.03	□□□□□ -0.16
APTX-222	ENST00000478279	POLR2A	P24928	1970 aa	Known RBP	14.02	□□□□□ -0.16
APTX-222	ENST00000478279	YDJC	A8MPS7	323 aa		14.02	□□□□□ -0.17
APTX-222	ENST00000478279	SOX10	P56693	466 aa		14.02	□□□□□ -0.17
APTX-222	ENST00000478279	KIF23	Q02241	960 aa	Predicted RBP	14.02	□□□□□ -0.17
APTX-222	ENST00000478279	DLK2	Q6UY11	383 aa		14.02	□□□□□ -0.17
APTX-222	ENST00000478279	MICALL2	Q8IY33	904 aa		14.02	□□□□□ -0.17
APTX-222	ENST00000478279	DPF2	Q92785	391 aa		14.02	□□□□□ -0.17
APTX-222	ENST00000478279	CCDC102A	Q96A19	550 aa		14.02	□□□□□ -0.17
APTX-222	ENST00000478279	GBA2	Q9HCG7	927 aa	Predicted RBP	14.02	□□□□□ -0.17
APTX-222	ENST00000478279	PPP2R1A	P30153	589 aa		14.01	□□□□□ -0.17
APTX-222	ENST00000478279	DDX46	Q7L014	1031 aa	Known RBP	14.01	□□□□□ -0.17
APTX-222	ENST00000478279	KRT26	Q7Z3Y9	468 aa		14.01	□□□□□ -0.17
APTX-222	ENST00000478279	C2orf69	Q8N8R5	385 aa		14.01	□□□□□ -0.17
APTX-222	ENST00000478279	DLG5	Q8TDM6	1919 aa		14	□□□□□ -0.17
APTX-222	ENST00000478279	AKAP11	Q9UKA4	1901 aa		14	□□□□□ -0.17
APTX-222	ENST00000478279	TRPA1	O75762	1119 aa		14	□□□□□ -0.17
APTX-222	ENST00000478279	NEFM	P07197	916 aa		14	□□□□□ -0.17
APTX-222	ENST00000478279	HCLS1	P14317	486 aa	Predicted RBP	14	□□□□□ -0.17
APTX-222	ENST00000478279	GRAP	Q13588	217 aa		14	□□□□□ -0.17
APTX-222	ENST00000478279	PRPF38B	Q5VTL8	546 aa	Known RBP	14	□□□□□ -0.17
APTX-222	ENST00000478279	SAMD7	Q7Z3H4	446 aa		14	□□□□□ -0.17
APTX-222	ENST00000478279	LRP10	Q7Z4F1	713 aa		14	□□□□□ -0.17
APTX-222	ENST00000478279	GRAPL	Q8TC17	118 aa	Predicted RBP	14	□□□□□ -0.17
APTX-222	ENST00000478279	RNF186	Q9NXI6	227 aa		14	□□□□□ -0.17
APTX-222	ENST00000478279	ZBTB12	Q9Y330	459 aa	Predicted RBP	14	□□□□□ -0.17
APTX-222	ENST00000478279	ANKRD36C	Q5JPF3	1778 aa		14	□□□□□ -0.17
APTX-222	ENST00000478279	ZNF157	P51786	506 aa	Predicted RBP	13.99	□□□□□ -0.17
APTX-222	ENST00000478279	PDIA6	Q15084	440 aa		13.99	□□□□□ -0.17
APTX-222	ENST00000478279	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.99	□□□□□ -0.17
APTX-222	ENST00000478279	TMC4	Q7Z404	712 aa		13.99	□□□□□ -0.17
APTX-222	ENST00000478279	CCER1	Q8TC90	406 aa	Predicted RBP	13.99	□□□□□ -0.17
APTX-222	ENST00000478279	THUMPD2	Q9BTF0	503 aa	Known RBP	13.99	□□□□□ -0.17
APTX-222	ENST00000478279	LAMB2	P55268	1798 aa		13.99	□□□□□ -0.17
APTX-222	ENST00000478279	PSMD14	O00487	310 aa		13.98	□□□□□ -0.17
APTX-222	ENST00000478279	HSP90AB3P	Q58FF7	597 aa		13.98	□□□□□ -0.17
APTX-222	ENST00000478279	CTU1	Q7Z7A3	348 aa	Known RBP	13.98	□□□□□ -0.17
APTX-222	ENST00000478279	NLRP10	Q86W26	655 aa		13.98	□□□□□ -0.17
APTX-222	ENST00000478279	DCPS	Q96C86	337 aa	Known RBP	13.98	□□□□□ -0.17
APTX-222	ENST00000478279	CSRNP1	Q96S65	589 aa		13.98	□□□□□ -0.17
APTX-222	ENST00000478279	DUOX1	Q9NRD9	1551 aa		13.97	□□□□□ -0.17
APTX-222	ENST00000478279	ADM5	C9JUS6	153 aa		13.97	□□□□□ -0.17
APTX-222	ENST00000478279	EGFR	P00533	1210 aa		13.97	□□□□□ -0.17
APTX-222	ENST00000478279	RPS12	P25398	132 aa	Known RBP	13.97	□□□□□ -0.17
APTX-222	ENST00000478279	WASHC4	Q2M389	1173 aa		13.97	□□□□□ -0.17
APTX-222	ENST00000478279	TRMT112	Q9UI30	125 aa	Known RBP	13.97	□□□□□ -0.17
APTX-222	ENST00000478279	TAF1	P21675	1872 aa		13.96	□□□□□ -0.17
APTX-222	ENST00000478279	SLC10A3	P09131	477 aa		13.96	□□□□□ -0.17
APTX-222	ENST00000478279	EIF2S2	P20042	333 aa	Known RBP	13.96	□□□□□ -0.17
APTX-222	ENST00000478279	NFE2L2	Q16236	605 aa		13.96	□□□□□ -0.17
APTX-222	ENST00000478279	RBM26	Q5T8P6	1007 aa	Known RBP	13.96	□□□□□ -0.17
APTX-222	ENST00000478279	REM2	Q8IYK8	340 aa	Predicted RBP	13.96	□□□□□ -0.17
APTX-222	ENST00000478279	DBNDD1	Q9H9R9	158 aa		13.96	□□□□□ -0.17
APTX-222	ENST00000478279	SH3TC1	Q8TE82	1336 aa		13.95	□□□□□ -0.18
APTX-222	ENST00000478279	ANXA1	P04083	346 aa		13.95	□□□□□ -0.18
APTX-222	ENST00000478279	TCIRG1	Q13488	830 aa		13.95	□□□□□ -0.18
APTX-222	ENST00000478279	PROSER3	Q2NL68	480 aa		13.95	□□□□□ -0.18
APTX-222	ENST00000478279	PLEKHF1	Q96S99	279 aa		13.95	□□□□□ -0.18
APTX-222	ENST00000478279	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.95	□□□□□ -0.18
APTX-222	ENST00000478279	LRRC37A	A6NMS7	1700 aa		13.94	□□□□□ -0.18
APTX-222	ENST00000478279	RIMBP2	O15034	1052 aa		13.94	□□□□□ -0.18
APTX-222	ENST00000478279	COPS6	Q7L5N1	327 aa		13.94	□□□□□ -0.18
APTX-222	ENST00000478279	SULF1	Q8IWU6	871 aa		13.94	□□□□□ -0.18
APTX-222	ENST00000478279	KCNQ5	Q9NR82	932 aa		13.94	□□□□□ -0.18
APTX-222	ENST00000478279	TSPYL4	Q9UJ04	414 aa		13.94	□□□□□ -0.18
APTX-222	ENST00000478279	HPS5	Q9UPZ3	1129 aa		13.94	□□□□□ -0.18
APTX-222	ENST00000478279	C6orf229	H3BNL8	230 aa		13.93	□□□□□ -0.18
APTX-222	ENST00000478279	ECE2	O60344	883 aa		13.93	□□□□□ -0.18
APTX-222	ENST00000478279	AIMP1	Q12904	312 aa	Known RBP	13.93	□□□□□ -0.18
APTX-222	ENST00000478279	KIF4B	Q2VIQ3	1234 aa		13.93	□□□□□ -0.18
APTX-222	ENST00000478279	XAGE3	Q8WTP9	111 aa		13.93	□□□□□ -0.18
APTX-222	ENST00000478279	POLL	Q9UGP5	575 aa		13.93	□□□□□ -0.18
APTX-222	ENST00000478279	RTL9	Q8NET4	1388 aa		13.93	□□□□□ -0.18
APTX-222	ENST00000478279	PKN2	Q16513	984 aa	Known RBP	13.92	□□□□□ -0.18
APTX-222	ENST00000478279	DOK7	Q18PE1	504 aa		13.92	□□□□□ -0.18
APTX-222	ENST00000478279	RASAL3	Q86YV0	1011 aa		13.92	□□□□□ -0.18
APTX-222	ENST00000478279	CELF1	Q92879	486 aa	Known RBP	13.92	□□□□□ -0.18
APTX-222	ENST00000478279	CDCA5	Q96FF9	252 aa		13.92	□□□□□ -0.18
APTX-222	ENST00000478279	EYA3	Q99504	573 aa		13.92	□□□□□ -0.18
APTX-222	ENST00000478279	GGA3	Q9NZ52	723 aa		13.92	□□□□□ -0.18
APTX-222	ENST00000478279	VIL1	P09327	827 aa	Known RBP	13.91	□□□□□ -0.18
APTX-222	ENST00000478279	GPSM2	P81274	684 aa		13.91	□□□□□ -0.18
APTX-222	ENST00000478279	SF3B3	Q15393	1217 aa	Known RBP	13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms