RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 ICE2Q659A1 982 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 PACS2Q86VP3 889 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 GEMIN8Q9NWZ8 242 aaKnown RBP11.53□□□□□ -0.56
COL13A1-207ENST00000478219 MLH3Q9UHC1 1453 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 NEXMIFQ5QGS0 1516 aa11.53□□□□□ -0.56
COL13A1-207ENST00000478219 BECN2A8MW95 431 aa11.52□□□□□ -0.56
COL13A1-207ENST00000478219 ANKRD65E5RJM6 399 aa11.52□□□□□ -0.56
COL13A1-207ENST00000478219 JAK2O60674 1132 aa11.52□□□□□ -0.56
COL13A1-207ENST00000478219 GGT6Q6P531 493 aa11.52□□□□□ -0.56
COL13A1-207ENST00000478219 ZSCAN31Q96LW9 406 aaPredicted RBP11.52□□□□□ -0.56
COL13A1-207ENST00000478219 RAB11FIP3O75154 756 aa11.52□□□□□ -0.57
COL13A1-207ENST00000478219 SULT6B1Q6IMI4 303 aa11.52□□□□□ -0.57
COL13A1-207ENST00000478219 CC2D1AQ6P1N0 951 aaPredicted RBP11.52□□□□□ -0.57
COL13A1-207ENST00000478219 TRIM65Q6PJ69 517 aa11.52□□□□□ -0.57
COL13A1-207ENST00000478219 FBXO18Q8NFZ0 1043 aa11.52□□□□□ -0.57
COL13A1-207ENST00000478219 ADAM21Q9UKJ8 722 aa11.52□□□□□ -0.57
COL13A1-207ENST00000478219 SETD1AO15047 1707 aaKnown RBP11.51□□□□□ -0.57
COL13A1-207ENST00000478219 KIF2AO00139 706 aaPredicted RBP11.51□□□□□ -0.57
COL13A1-207ENST00000478219 FOXO3O43524 673 aa11.51□□□□□ -0.57
COL13A1-207ENST00000478219 SURF6O75683 361 aaKnown RBP11.51□□□□□ -0.57
COL13A1-207ENST00000478219 HOMER1Q86YM7 354 aa11.51□□□□□ -0.57
COL13A1-207ENST00000478219 OSBPL5Q9H0X9 879 aaPredicted RBP11.51□□□□□ -0.57
COL13A1-207ENST00000478219 SOS1Q07889 1333 aaPredicted RBP11.51□□□□□ -0.57
COL13A1-207ENST00000478219 FRMPD1Q5SYB0 1578 aa11.51□□□□□ -0.57
COL13A1-207ENST00000478219 URI1O94763 535 aaPredicted RBP11.51□□□□□ -0.57
COL13A1-207ENST00000478219 IDI1Q13907 227 aa11.51□□□□□ -0.57
COL13A1-207ENST00000478219 NECTIN1Q15223 517 aa11.51□□□□□ -0.57
COL13A1-207ENST00000478219 STX1AQ16623 288 aa11.51□□□□□ -0.57
COL13A1-207ENST00000478219 PTPN21Q16825 1174 aa11.51□□□□□ -0.57
COL13A1-207ENST00000478219 TMC6Q7Z403 805 aa11.51□□□□□ -0.57
COL13A1-207ENST00000478219 XPO4Q9C0E2 1151 aaKnown RBP11.51□□□□□ -0.57
COL13A1-207ENST00000478219 USP44Q9H0E7 712 aa11.51□□□□□ -0.57
COL13A1-207ENST00000478219 AOX1Q06278 1338 aa11.51□□□□□ -0.57
COL13A1-207ENST00000478219 PSEN1P49768 467 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 EVCP57679 992 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 ETF1P62495 437 aaKnown RBP11.5□□□□□ -0.57
COL13A1-207ENST00000478219 SART3Q15020 963 aaKnown RBP11.5□□□□□ -0.57
COL13A1-207ENST00000478219 RHPN1Q8TCX5 695 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 ARGLU1Q9NWB6 273 aaPredicted RBP11.5□□□□□ -0.57
COL13A1-207ENST00000478219 GOLGA8FQ08AF8 430 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 GOLGA8DPQ0D2H9 430 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 NBPF6Q5VWK0 638 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 PPP1R42Q7Z4L9 355 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 CNTROBQ8N137 903 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 GOLGA5Q8TBA6 731 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 NBPF4Q96M43 638 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 DRC1Q96MC2 740 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 FUT8Q9BYC5 575 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 PARP3Q9Y6F1 533 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 PLEKHG2Q9H7P9 1386 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 ATP7BP35670 1465 aa11.5□□□□□ -0.57
COL13A1-207ENST00000478219 FOSBP53539 338 aa11.49□□□□□ -0.57
COL13A1-207ENST00000478219 FLIIQ13045 1269 aa11.49□□□□□ -0.57
COL13A1-207ENST00000478219 RESTQ13127 1097 aa11.49□□□□□ -0.57
COL13A1-207ENST00000478219 CCAR1Q8IX12 1150 aaKnown RBP11.49□□□□□ -0.57
COL13A1-207ENST00000478219 FAM177A1Q8N128 213 aaPredicted RBP11.49□□□□□ -0.57
COL13A1-207ENST00000478219 MNS1Q8NEH6 495 aa11.49□□□□□ -0.57
COL13A1-207ENST00000478219 IFNKQ9P0W0 207 aa11.49□□□□□ -0.57
COL13A1-207ENST00000478219 PSDA5PKW4 1024 aaPredicted RBP11.49□□□□□ -0.57
COL13A1-207ENST00000478219 TOB2Q14106 344 aaPredicted RBP11.49□□□□□ -0.57
COL13A1-207ENST00000478219 CREB3L3Q68CJ9 461 aa11.49□□□□□ -0.57
COL13A1-207ENST00000478219 TM6SF1Q9BZW5 370 aa11.49□□□□□ -0.57
COL13A1-207ENST00000478219 RBM8AQ9Y5S9 174 aaKnown RBP11.49□□□□□ -0.57
COL13A1-207ENST00000478219 CRB1P82279 1406 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 POGZQ7Z3K3 1410 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 NCKAP5LQ9HCH0 1330 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 SMC2O95347 1197 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 CAVIN2O95810 425 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 ADD1P35611 737 aaKnown RBP11.48□□□□□ -0.57
COL13A1-207ENST00000478219 GSDMDP57764 484 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 GPS2Q13227 327 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 SSH3Q8TE77 659 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 KCNB2Q92953 911 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 BRF1Q92994 677 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 JRKLQ9Y4A0 524 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 SIGLEC1Q9BZZ2 1709 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 PDCP20941 246 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 GUCY2CP25092 1073 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 ACTN2P35609 894 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 CCDC158Q5M9N0 1113 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 FAM227BQ96M60 508 aa11.48□□□□□ -0.57
COL13A1-207ENST00000478219 EFCAB8A8MWE9 144 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 PPFIA3O75145 1194 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 SFPQP23246 707 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL13A1-207ENST00000478219 MMP14P50281 582 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 E2F4Q16254 413 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 DPCR1Q3MIW9 517 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 EP400NLQ6ZTU2 488 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 FMNL2Q96PY5 1086 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 PARD6BQ9BYG5 372 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 RIMBP3CA6NJZ7 1639 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 RIMBP3BA6NNM3 1639 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 RIMBP3Q9UFD9 1639 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 N4BP1O75113 896 aaKnown RBP11.47□□□□□ -0.57
COL13A1-207ENST00000478219 EIF4A2Q14240 407 aaKnown RBP11.47□□□□□ -0.57
COL13A1-207ENST00000478219 WAPLQ7Z5K2 1190 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 EXOC4Q96A65 974 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 TSPYL4Q9UJ04 414 aa11.47□□□□□ -0.57
COL13A1-207ENST00000478219 PHLPP2Q6ZVD8 1323 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms