RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 CHRNA5P30532 468 aa21.1■□□□□ 0.97
EPHB4-204ENST00000477446 FOXO4P98177 505 aa21.1■□□□□ 0.97
EPHB4-204ENST00000477446 CRY2Q49AN0 593 aa21.1■□□□□ 0.97
EPHB4-204ENST00000477446 EPHA10Q5JZY3 1008 aa21.1■□□□□ 0.97
EPHB4-204ENST00000477446 C2CD5Q86YS7 1000 aa21.1■□□□□ 0.97
EPHB4-204ENST00000477446 A0A0G2JLW4 131 aa21.09■□□□□ 0.97
EPHB4-204ENST00000477446 CTSWP56202 376 aa21.09■□□□□ 0.97
EPHB4-204ENST00000477446 SF3B3Q15393 1217 aaKnown RBP21.09■□□□□ 0.97
EPHB4-204ENST00000477446 SYT17Q9BSW7 474 aa21.09■□□□□ 0.97
EPHB4-204ENST00000477446 H0YIN7 160 aa21.08■□□□□ 0.97
EPHB4-204ENST00000477446 SRGNP10124 158 aa21.08■□□□□ 0.97
EPHB4-204ENST00000477446 DPEP1P16444 411 aa21.08■□□□□ 0.97
EPHB4-204ENST00000477446 NLGN2Q8NFZ4 835 aa21.08■□□□□ 0.97
EPHB4-204ENST00000477446 PDZRN3Q9UPQ7 1066 aa21.08■□□□□ 0.97
EPHB4-204ENST00000477446 LRRFIP2Q9Y608 721 aaKnown RBP21.08■□□□□ 0.97
EPHB4-204ENST00000477446 KDM2BQ8NHM5 1336 aa21.08■□□□□ 0.96
EPHB4-204ENST00000477446 DLEC1Q9Y238 1755 aa21.07■□□□□ 0.96
EPHB4-204ENST00000477446 TTLL11Q8NHH1 800 aa21.07■□□□□ 0.96
EPHB4-204ENST00000477446 BICC1Q9H694 974 aaKnown RBP21.07■□□□□ 0.96
EPHB4-204ENST00000477446 CSF1RP07333 972 aa21.06■□□□□ 0.96
EPHB4-204ENST00000477446 KCNA3P22001 575 aa21.06■□□□□ 0.96
EPHB4-204ENST00000477446 CCDC85AQ96PX6 553 aaPredicted RBP21.06■□□□□ 0.96
EPHB4-204ENST00000477446 HDAC5Q9UQL6 1122 aa21.06■□□□□ 0.96
EPHB4-204ENST00000477446 GNAI2P04899 355 aa21.06■□□□□ 0.96
EPHB4-204ENST00000477446 LMBR1LQ6UX01 489 aa21.06■□□□□ 0.96
EPHB4-204ENST00000477446 ANKRD44Q8N8A2 993 aa21.06■□□□□ 0.96
EPHB4-204ENST00000477446 RPGRQ92834 1020 aaKnown RBP21.06■□□□□ 0.96
EPHB4-204ENST00000477446 MASTLQ96GX5 879 aa21.06■□□□□ 0.96
EPHB4-204ENST00000477446 TAF1P21675 1872 aa21.05■□□□□ 0.96
EPHB4-204ENST00000477446 NPR1P16066 1061 aa21.05■□□□□ 0.96
EPHB4-204ENST00000477446 RABL6Q3YEC7 729 aaPredicted RBP21.05■□□□□ 0.96
EPHB4-204ENST00000477446 CCDC152Q4G0S7 254 aa21.05■□□□□ 0.96
EPHB4-204ENST00000477446 ZNF622Q969S3 477 aaKnown RBP eCLIP21.05■□□□□ 0.96
EPHB4-204ENST00000477446 ZBTB40Q9NUA8 1239 aa21.05■□□□□ 0.96
EPHB4-204ENST00000477446 HOXA10P31260 410 aaPredicted RBP21.04■□□□□ 0.96
EPHB4-204ENST00000477446 CHMP4BQ9H444 224 aaKnown RBP21.04■□□□□ 0.96
EPHB4-204ENST00000477446 GREM2Q9H772 168 aa21.04■□□□□ 0.96
EPHB4-204ENST00000477446 C1orf115Q9H7X2 142 aa21.04■□□□□ 0.96
EPHB4-204ENST00000477446 BRCA1P38398 1863 aaKnown RBP21.04■□□□□ 0.96
EPHB4-204ENST00000477446 STYK1Q6J9G0 422 aa21.03■□□□□ 0.96
EPHB4-204ENST00000477446 RBM17Q96I25 401 aaKnown RBP21.03■□□□□ 0.96
EPHB4-204ENST00000477446 CACNA1SQ13698 1873 aa21.03■□□□□ 0.96
EPHB4-204ENST00000477446 FAM161AQ3B820 660 aa21.02■□□□□ 0.96
EPHB4-204ENST00000477446 DDX46Q7L014 1031 aaKnown RBP21.02■□□□□ 0.96
EPHB4-204ENST00000477446 SEC31BQ9NQW1 1179 aa21.02■□□□□ 0.96
EPHB4-204ENST00000477446 CHMP3Q9Y3E7 222 aa21.02■□□□□ 0.96
EPHB4-204ENST00000477446 CRAMP1Q96RY5 1269 aa21.02■□□□□ 0.95
EPHB4-204ENST00000477446 PIM2Q9P1W9 311 aa21.02■□□□□ 0.95
EPHB4-204ENST00000477446 COL4A1P02462 1669 aa21.01■□□□□ 0.95
EPHB4-204ENST00000477446 RTL9Q8NET4 1388 aa21.01■□□□□ 0.95
EPHB4-204ENST00000477446 ITGA6P23229 1130 aa21■□□□□ 0.95
EPHB4-204ENST00000477446 ALDH1B1P30837 517 aa21■□□□□ 0.95
EPHB4-204ENST00000477446 WWC3Q9ULE0 1092 aa21■□□□□ 0.95
EPHB4-204ENST00000477446 SLX4Q8IY92 1834 aa20.99■□□□□ 0.95
EPHB4-204ENST00000477446 CELF1Q92879 486 aaKnown RBP20.99■□□□□ 0.95
EPHB4-204ENST00000477446 CNKSR1Q969H4 720 aa20.99■□□□□ 0.95
EPHB4-204ENST00000477446 IFIT5Q13325 482 aaKnown RBP20.98■□□□□ 0.95
EPHB4-204ENST00000477446 MTX1Q13505 466 aa20.98■□□□□ 0.95
EPHB4-204ENST00000477446 GRAPQ13588 217 aa20.98■□□□□ 0.95
EPHB4-204ENST00000477446 CCDC57Q2TAC2 916 aa20.98■□□□□ 0.95
EPHB4-204ENST00000477446 TTLL6Q8N841 843 aa20.98■□□□□ 0.95
EPHB4-204ENST00000477446 GRAPLQ8TC17 118 aaPredicted RBP20.98■□□□□ 0.95
EPHB4-204ENST00000477446 ANKRD18BA2A2Z9 1011 aa20.97■□□□□ 0.95
EPHB4-204ENST00000477446 PRPF40BQ6NWY9 871 aaKnown RBP20.97■□□□□ 0.95
EPHB4-204ENST00000477446 SPEF2Q9C093 1822 aa20.97■□□□□ 0.95
EPHB4-204ENST00000477446 CDC5LQ99459 802 aaKnown RBP20.97■□□□□ 0.95
EPHB4-204ENST00000477446 PNMA6EA0A0J9YXQ4 647 aa20.96■□□□□ 0.95
EPHB4-204ENST00000477446 SRGAP3O43295 1099 aa20.96■□□□□ 0.95
EPHB4-204ENST00000477446 RPS8P62241 208 aaKnown RBP20.96■□□□□ 0.95
EPHB4-204ENST00000477446 ATP8B2P98198 1209 aa20.96■□□□□ 0.95
EPHB4-204ENST00000477446 DALRD3Q5D0E6 543 aaKnown RBP20.96■□□□□ 0.95
EPHB4-204ENST00000477446 CEP85Q6P2H3 762 aa20.96■□□□□ 0.95
EPHB4-204ENST00000477446 BBOX1O75936 387 aa20.95■□□□□ 0.94
EPHB4-204ENST00000477446 RFX5P48382 616 aaPredicted RBP20.95■□□□□ 0.94
EPHB4-204ENST00000477446 ANKRD18AQ8IVF6 992 aa20.95■□□□□ 0.94
EPHB4-204ENST00000477446 ZNF594Q96JF6 807 aaPredicted RBP20.95■□□□□ 0.94
EPHB4-204ENST00000477446 GOLGB1Q14789 3259 aaKnown RBP20.95■□□□□ 0.94
EPHB4-204ENST00000477446 BCS1LQ9Y276 419 aa20.94■□□□□ 0.94
EPHB4-204ENST00000477446 PPEF1O14829 653 aaPredicted RBP20.93■□□□□ 0.94
EPHB4-204ENST00000477446 RPAP2Q8IXW5 612 aaPredicted RBP20.93■□□□□ 0.94
EPHB4-204ENST00000477446 KLHDC4Q8TBB5 520 aa20.93■□□□□ 0.94
EPHB4-204ENST00000477446 PDE4AP27815 886 aa20.93■□□□□ 0.94
EPHB4-204ENST00000477446 IGHMBP2P38935 993 aaKnown RBP20.93■□□□□ 0.94
EPHB4-204ENST00000477446 PTPN12Q05209 780 aaKnown RBP20.93■□□□□ 0.94
EPHB4-204ENST00000477446 TAF7LQ5H9L4 462 aa20.93■□□□□ 0.94
EPHB4-204ENST00000477446 SLC51AQ86UW1 340 aa20.93■□□□□ 0.94
EPHB4-204ENST00000477446 C7orf43Q8WVR3 580 aa20.93■□□□□ 0.94
EPHB4-204ENST00000477446 ZNF219Q9P2Y4 722 aaPredicted RBP20.93■□□□□ 0.94
EPHB4-204ENST00000477446 ARFGEF1Q9Y6D6 1849 aa20.93■□□□□ 0.94
EPHB4-204ENST00000477446 POLA2Q14181 598 aa20.92■□□□□ 0.94
EPHB4-204ENST00000477446 SIRT2Q8IXJ6 389 aa20.92■□□□□ 0.94
EPHB4-204ENST00000477446 SSH3Q8TE77 659 aa20.92■□□□□ 0.94
EPHB4-204ENST00000477446 BACH2Q9BYV9 841 aa20.92■□□□□ 0.94
EPHB4-204ENST00000477446 BSDC1Q9NW68 430 aaPredicted RBP20.92■□□□□ 0.94
EPHB4-204ENST00000477446 PCDHB15Q9Y5E8 787 aa20.92■□□□□ 0.94
EPHB4-204ENST00000477446 C21orf2O43822 256 aa20.91■□□□□ 0.94
EPHB4-204ENST00000477446 OLFM4Q6UX06 510 aa20.91■□□□□ 0.94
EPHB4-204ENST00000477446 TMC4Q7Z404 712 aa20.91■□□□□ 0.94
EPHB4-204ENST00000477446 MPHOSPH8Q99549 860 aa20.91■□□□□ 0.94
EPHB4-204ENST00000477446 ATP6V0A2Q9Y487 856 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms