RNA–Protein interactions for RNA: ENST00000476905.6

SSX2IP-206, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2

Gene SSX2IP, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-206ENST00000476905 IRS4O14654 1257 aaPredicted RBP11.52□□□□□ -0.56
SSX2IP-206ENST00000476905 CASP7P55210 303 aa11.52□□□□□ -0.56
SSX2IP-206ENST00000476905 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.56
SSX2IP-206ENST00000476905 CRAMP1Q96RY5 1269 aa11.52□□□□□ -0.56
SSX2IP-206ENST00000476905 BCL2L13Q9BXK5 485 aa11.52□□□□□ -0.56
SSX2IP-206ENST00000476905 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.56
SSX2IP-206ENST00000476905 ABCC4O15439 1325 aa11.52□□□□□ -0.57
SSX2IP-206ENST00000476905 DDX58O95786 925 aaKnown RBP11.52□□□□□ -0.57
SSX2IP-206ENST00000476905 PCCAP05165 728 aaPredicted RBP11.52□□□□□ -0.57
SSX2IP-206ENST00000476905 HNRNPUQ00839 825 aaKnown RBP eCLIP11.52□□□□□ -0.57
SSX2IP-206ENST00000476905 SF3B3Q15393 1217 aaKnown RBP11.52□□□□□ -0.57
SSX2IP-206ENST00000476905 DNAAF4Q8WXU2 420 aa11.52□□□□□ -0.57
SSX2IP-206ENST00000476905 CWC25Q9NXE8 425 aaPredicted RBP11.52□□□□□ -0.57
SSX2IP-206ENST00000476905 H7C1W4 665 aa11.51□□□□□ -0.57
SSX2IP-206ENST00000476905 ALDH1B1P30837 517 aa11.51□□□□□ -0.57
SSX2IP-206ENST00000476905 BEND3Q5T5X7 828 aa11.51□□□□□ -0.57
SSX2IP-206ENST00000476905 RPGRQ92834 1020 aaKnown RBP11.51□□□□□ -0.57
SSX2IP-206ENST00000476905 CELF1Q92879 486 aaKnown RBP11.51□□□□□ -0.57
SSX2IP-206ENST00000476905 SEC31BQ9NQW1 1179 aa11.51□□□□□ -0.57
SSX2IP-206ENST00000476905 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
SSX2IP-206ENST00000476905 GCKRQ14397 625 aa11.5□□□□□ -0.57
SSX2IP-206ENST00000476905 ZNF526Q8TF50 670 aaPredicted RBP11.5□□□□□ -0.57
SSX2IP-206ENST00000476905 DDX60Q8IY21 1712 aaKnown RBP11.5□□□□□ -0.57
SSX2IP-206ENST00000476905 LINS1Q8NG48 757 aa11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 RBM17Q96I25 401 aaKnown RBP11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 SBF1O95248 1867 aa11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 TAF1P21675 1872 aa11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 FER1L6Q2WGJ9 1857 aa11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 LAMB2P55268 1798 aa11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 LMNB1P20700 586 aa11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 BRPF1P55201 1214 aaPredicted RBP11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 CCDC85AQ96PX6 553 aaPredicted RBP11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 ZNF277Q9NRM2 450 aaPredicted RBP11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 PODXL2Q9NZ53 605 aa11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 LTBP3Q9NS15 1303 aa11.49□□□□□ -0.57
SSX2IP-206ENST00000476905 COL4A5P29400 1685 aa11.48□□□□□ -0.57
SSX2IP-206ENST00000476905 CACNA1SQ13698 1873 aa11.48□□□□□ -0.57
SSX2IP-206ENST00000476905 PPEF1O14829 653 aaPredicted RBP11.48□□□□□ -0.57
SSX2IP-206ENST00000476905 CCDC93Q567U6 631 aa11.48□□□□□ -0.57
SSX2IP-206ENST00000476905 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
SSX2IP-206ENST00000476905 UBE3BQ7Z3V4 1068 aa11.48□□□□□ -0.57
SSX2IP-206ENST00000476905 TAOK3Q9H2K8 898 aa11.48□□□□□ -0.57
SSX2IP-206ENST00000476905 ATP6V0A2Q9Y487 856 aa11.48□□□□□ -0.57
SSX2IP-206ENST00000476905 CDHR2Q9BYE9 1310 aa11.48□□□□□ -0.57
SSX2IP-206ENST00000476905 WTIPA6NIX2 430 aaPredicted RBP11.47□□□□□ -0.57
SSX2IP-206ENST00000476905 RARSP54136 660 aaKnown RBP11.47□□□□□ -0.57
SSX2IP-206ENST00000476905 GRAPQ13588 217 aa11.47□□□□□ -0.57
SSX2IP-206ENST00000476905 TTLL11Q8NHH1 800 aa11.47□□□□□ -0.57
SSX2IP-206ENST00000476905 GRAPLQ8TC17 118 aaPredicted RBP11.47□□□□□ -0.57
SSX2IP-206ENST00000476905 PDE8AO60658 829 aa11.47□□□□□ -0.57
SSX2IP-206ENST00000476905 FKBP4Q02790 459 aaKnown RBP eCLIP11.47□□□□□ -0.57
SSX2IP-206ENST00000476905 NEXNQ0ZGT2 675 aa11.47□□□□□ -0.57
SSX2IP-206ENST00000476905 KAZALD1Q96I82 304 aa11.47□□□□□ -0.57
SSX2IP-206ENST00000476905 NMRK2Q9NPI5 230 aa11.47□□□□□ -0.57
SSX2IP-206ENST00000476905 POTECB2RU33 542 aa11.46□□□□□ -0.57
SSX2IP-206ENST00000476905 BBOX1O75936 387 aa11.46□□□□□ -0.57
SSX2IP-206ENST00000476905 ALDH1L2Q3SY69 923 aa11.46□□□□□ -0.57
SSX2IP-206ENST00000476905 DDX46Q7L014 1031 aaKnown RBP11.46□□□□□ -0.57
SSX2IP-206ENST00000476905 SP8Q8IXZ3 490 aa11.46□□□□□ -0.57
SSX2IP-206ENST00000476905 TNNQ9UQP3 1299 aa11.46□□□□□ -0.57
SSX2IP-206ENST00000476905 KIF3CO14782 793 aa11.46□□□□□ -0.58
SSX2IP-206ENST00000476905 FOXO4P98177 505 aa11.46□□□□□ -0.58
SSX2IP-206ENST00000476905 SLC4A10Q6U841 1118 aa11.46□□□□□ -0.58
SSX2IP-206ENST00000476905 RTKN2Q8IZC4 609 aa11.46□□□□□ -0.58
SSX2IP-206ENST00000476905 GREM2Q9H772 168 aa11.46□□□□□ -0.58
SSX2IP-206ENST00000476905 CACNA1FO60840 1977 aa11.45□□□□□ -0.58
SSX2IP-206ENST00000476905 BCAR3O75815 825 aa11.45□□□□□ -0.58
SSX2IP-206ENST00000476905 CSF1RP07333 972 aa11.45□□□□□ -0.58
SSX2IP-206ENST00000476905 CTSWP56202 376 aa11.45□□□□□ -0.58
SSX2IP-206ENST00000476905 SOGA3Q5TF21 947 aa11.45□□□□□ -0.58
SSX2IP-206ENST00000476905 PSMD1Q99460 953 aa11.45□□□□□ -0.58
SSX2IP-206ENST00000476905 PLA2G12BQ9BX93 195 aa11.45□□□□□ -0.58
SSX2IP-206ENST00000476905 SMC4Q9NTJ3 1288 aa11.45□□□□□ -0.58
SSX2IP-206ENST00000476905 NOB1Q9ULX3 412 aaKnown RBP11.45□□□□□ -0.58
SSX2IP-206ENST00000476905 NBPF7P0C2Y1 421 aaPredicted RBP11.44□□□□□ -0.58
SSX2IP-206ENST00000476905 RPS8P62241 208 aaKnown RBP11.44□□□□□ -0.58
SSX2IP-206ENST00000476905 ZBED9Q6R2W3 1325 aa11.44□□□□□ -0.58
SSX2IP-206ENST00000476905 CC2D2BQ6DHV5 1058 aa11.44□□□□□ -0.58
SSX2IP-206ENST00000476905 RTFDC1Q9BY42 306 aaPredicted RBP11.44□□□□□ -0.58
SSX2IP-206ENST00000476905 GPBP1L1Q9HC44 474 aaPredicted RBP11.44□□□□□ -0.58
SSX2IP-206ENST00000476905 CT47B1P0C2W7 299 aaPredicted RBP11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 GPSM2P81274 684 aa11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 CCDC88AQ3V6T2 1871 aa11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 GPR101Q96P66 508 aaPredicted RBP11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 POLLQ9UGP5 575 aa11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 DUOX1Q9NRD9 1551 aa11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 PTPRCP08575 1304 aa11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 ZNF541Q9H0D2 1346 aa11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 GLTPD2A6NH11 291 aa11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 GRM8O00222 908 aa11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 DDNO94850 711 aaPredicted RBP11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 SUCLG2Q96I99 432 aa11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 SRCIN1Q9C0H9 1055 aa11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 USP44Q9H0E7 712 aa11.43□□□□□ -0.58
SSX2IP-206ENST00000476905 UTYO14607 1347 aa11.42□□□□□ -0.58
SSX2IP-206ENST00000476905 ALDH1L1O75891 902 aa11.42□□□□□ -0.58
SSX2IP-206ENST00000476905 FAM161AQ3B820 660 aa11.42□□□□□ -0.58
SSX2IP-206ENST00000476905 CCDC152Q4G0S7 254 aa11.42□□□□□ -0.58
SSX2IP-206ENST00000476905 RRAGCQ9HB90 399 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms