RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 ARHGAP27Q6ZUM4 889 aa7.11□□□□□ -1.27
SPTLC3-205ENST00000476791 JAZF1Q86VZ6 243 aa7.11□□□□□ -1.27
SPTLC3-205ENST00000476791 LMNTD2Q8IXW0 634 aa7.11□□□□□ -1.27
SPTLC3-205ENST00000476791 SAMD3Q8N6K7 520 aa7.11□□□□□ -1.27
SPTLC3-205ENST00000476791 SVIPQ8NHG7 77 aa7.11□□□□□ -1.27
SPTLC3-205ENST00000476791 HDAC9Q9UKV0 1011 aa7.11□□□□□ -1.27
SPTLC3-205ENST00000476791 BLOC1S6Q9UL45 172 aa7.11□□□□□ -1.27
SPTLC3-205ENST00000476791 KINO60870 393 aaKnown RBP7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 S1PR4O95977 384 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 GIGYF2Q6Y7W6 1299 aaKnown RBP7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 TAX1BP1Q86VP1 789 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 C17orf50Q8WW18 174 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 JDP2Q8WYK2 163 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 HLA-CQ95604 372 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 TMX1Q9H3N1 280 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 ZHX3Q9H4I2 956 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 BRMS1Q9HCU9 246 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 TBC1D7Q9P0N9 293 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 NOL7Q9UMY1 257 aaKnown RBP7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 TBC1D2BQ9UPU7 963 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 FGAP02671 866 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 XPCQ01831 940 aaPredicted RBP7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 SEPT2Q15019 361 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 SYCP2LQ5T4T6 812 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 AGAP9Q5VTM2 703 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 CCAR1Q8IX12 1150 aaKnown RBP7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 CENPTQ96BT3 561 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 TRIM11Q96F44 468 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 FEZ1Q99689 392 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 KMT5AQ9NQR1 393 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 TCEAL9Q9UHQ7 104 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 TTF2Q9UNY4 1162 aaKnown RBP7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 COL4A3BPQ9Y5P4 624 aa7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 V9GYY5 206 aaPredicted RBP7.1□□□□□ -1.27
SPTLC3-205ENST00000476791 PPEF1O14829 653 aaPredicted RBP7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 ADH1BP00325 375 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 GGCXP38435 758 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 HSP90B2PQ58FF3 399 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 PARP9Q8IXQ6 854 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 ERP27Q96DN0 273 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 SPSB2Q99619 263 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 TOMM22Q9NS69 142 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 GOLGA6L22H0YM25 854 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 RGS20O76081 388 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 ATG7O95352 703 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 MMEP08473 750 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 CBX1P83916 185 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 AKNAD1Q5T1N1 836 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 TEKT1Q969V4 418 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 SLC26A8Q96RN1 970 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 BCL2L13Q9BXK5 485 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 RSPH14Q9UHP6 348 aa7.09□□□□□ -1.27
SPTLC3-205ENST00000476791 RNASEH2AO75792 299 aaKnown RBP7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 MYBL2P10244 700 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 DDB1Q16531 1140 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 PREPLQ4J6C6 727 aaPredicted RBP7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 TTC19Q6DKK2 380 aaPredicted RBP7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 PDXDC1Q6P996 788 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 CCDC174Q6PII3 467 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 PODNQ7Z5L7 613 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 KRT77Q7Z794 578 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 MYLK4Q86YV6 388 aaPredicted RBP7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 THOC1Q96FV9 657 aaKnown RBP7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 MMTAG2Q9BU76 263 aaKnown RBP7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 KNSTRNQ9Y448 316 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 CFAP65Q6ZU64 1925 aaKnown RBP7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 RNF223E7ERA6 249 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 RFX1P22670 979 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 HOXA10P31260 410 aaPredicted RBP7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 GPSM2P81274 684 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 GUCA2AQ02747 115 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 NDUFAF2Q8N183 169 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 PCDH12Q9NPG4 1184 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 COMMD8Q9NX08 183 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 KIF3AQ9Y496 699 aa7.08□□□□□ -1.28
SPTLC3-205ENST00000476791 SETSIPP0DME0 302 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 SRGNP10124 158 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 GJC2Q5T442 439 aaPredicted RBP7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 RNF19BQ6ZMZ0 732 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 NUTM1Q86Y26 1132 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 NPAS4Q8IUM7 802 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 SLC43A3Q8NBI5 491 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 GABPB2Q8TAK5 448 aaPredicted RBP7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 JARID2Q92833 1246 aaPredicted RBP7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 CEP89Q96ST8 783 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 PRKD2Q9BZL6 878 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 SLC6A16Q9GZN6 736 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 INCENPQ9NQS7 918 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 HOXC10Q9NYD6 342 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 HOXD10P28358 340 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 UBE4AQ14139 1066 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 ANKRD45Q5TZF3 282 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 SYNE3Q6ZMZ3 975 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 NFXL1Q6ZNB6 911 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 ZNF771Q7L3S4 317 aaPredicted RBP7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 NOP9Q86U38 636 aaKnown RBP7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 HELQQ8TDG4 1101 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 MPP4Q96JB8 637 aa7.07□□□□□ -1.28
SPTLC3-205ENST00000476791 TMEM87BQ96K49 555 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms