RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 RNFT1Q5M7Z0 435 aa11.17□□□□□ -0.62
CHD6-207ENST00000476641 TESK2Q96S53 571 aa11.17□□□□□ -0.62
CHD6-207ENST00000476641 SLC12A5Q9H2X9 1139 aa11.17□□□□□ -0.62
CHD6-207ENST00000476641 COL14A1Q05707 1796 aaKnown RBP11.16□□□□□ -0.62
CHD6-207ENST00000476641 NWD2Q9ULI1 1742 aa11.16□□□□□ -0.62
CHD6-207ENST00000476641 ZNF385CQ66K41 422 aaPredicted RBP11.16□□□□□ -0.62
CHD6-207ENST00000476641 LARP1Q6PKG0 1096 aaKnown RBP11.16□□□□□ -0.62
CHD6-207ENST00000476641 NLRP13Q86W25 1043 aa11.16□□□□□ -0.62
CHD6-207ENST00000476641 SVOPQ8N4V2 548 aa11.16□□□□□ -0.62
CHD6-207ENST00000476641 TMC1Q8TDI8 760 aa11.16□□□□□ -0.62
CHD6-207ENST00000476641 USP35Q9P2H5 1018 aa11.16□□□□□ -0.62
CHD6-207ENST00000476641 CD163L1Q9NR16 1453 aa11.16□□□□□ -0.62
CHD6-207ENST00000476641 SBNO2Q9Y2G9 1366 aa11.16□□□□□ -0.62
CHD6-207ENST00000476641 CAMTA1Q9Y6Y1 1673 aa11.15□□□□□ -0.62
CHD6-207ENST00000476641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.15□□□□□ -0.625e-7■■■■□ 20.8
CHD6-207ENST00000476641 SLC10A4Q96EP9 437 aa11.15□□□□□ -0.62
CHD6-207ENST00000476641 KCTD15Q96SI1 283 aaPredicted RBP11.15□□□□□ -0.62
CHD6-207ENST00000476641 ARHGAP9Q9BRR9 750 aa11.15□□□□□ -0.62
CHD6-207ENST00000476641 CPSF1Q10570 1443 aaKnown RBP11.15□□□□□ -0.62
CHD6-207ENST00000476641 PIK3C2AO00443 1686 aa11.14□□□□□ -0.63
CHD6-207ENST00000476641 SPATA31A1Q5TZJ5 1347 aa11.14□□□□□ -0.63
CHD6-207ENST00000476641 SLC35F4A4IF30 521 aa11.14□□□□□ -0.63
CHD6-207ENST00000476641 KRT27Q7Z3Y8 459 aa11.14□□□□□ -0.63
CHD6-207ENST00000476641 DEFB132Q7Z7B7 95 aa11.14□□□□□ -0.63
CHD6-207ENST00000476641 NME9Q86XW9 330 aa11.14□□□□□ -0.63
CHD6-207ENST00000476641 CPDO75976 1380 aa11.14□□□□□ -0.63
CHD6-207ENST00000476641 KTN1Q86UP2 1357 aaKnown RBP11.14□□□□□ -0.63
CHD6-207ENST00000476641 CDC14CA4D256 554 aa11.13□□□□□ -0.63
CHD6-207ENST00000476641 ITGA6P23229 1130 aa11.13□□□□□ -0.63
CHD6-207ENST00000476641 CTDSPL2Q05D32 466 aa11.13□□□□□ -0.63
CHD6-207ENST00000476641 PDXDC2PQ6P474 469 aa11.13□□□□□ -0.63
CHD6-207ENST00000476641 VWA5B2Q8N398 1253 aa11.13□□□□□ -0.63
CHD6-207ENST00000476641 AGBL1Q96MI9 1066 aa11.13□□□□□ -0.63
CHD6-207ENST00000476641 POLR3EQ9NVU0 708 aa11.13□□□□□ -0.63
CHD6-207ENST00000476641 BRWD3Q6RI45 1802 aa11.13□□□□□ -0.63
CHD6-207ENST00000476641 SLIT3O75094 1523 aa11.13□□□□□ -0.63
CHD6-207ENST00000476641 USP47Q96K76 1375 aa11.13□□□□□ -0.63
CHD6-207ENST00000476641 CTSOP43234 321 aaPredicted RBP11.12□□□□□ -0.63
CHD6-207ENST00000476641 EVA1CP58658 441 aa11.12□□□□□ -0.63
CHD6-207ENST00000476641 DHX9Q08211 1270 aaKnown RBP11.12□□□□□ -0.63
CHD6-207ENST00000476641 WHAMMQ8TF30 809 aa11.12□□□□□ -0.63
CHD6-207ENST00000476641 CDV3Q9UKY7 258 aaKnown RBP11.12□□□□□ -0.63
CHD6-207ENST00000476641 LMO7Q8WWI1 1683 aa11.11□□□□□ -0.63
CHD6-207ENST00000476641 RELBQ01201 579 aa11.11□□□□□ -0.63
CHD6-207ENST00000476641 INSM2Q96T92 566 aaPredicted RBP11.11□□□□□ -0.63
CHD6-207ENST00000476641 FKBPLQ9UIM3 349 aa11.11□□□□□ -0.63
CHD6-207ENST00000476641 A0A1W2PP64 1363 aa11.11□□□□□ -0.63
CHD6-207ENST00000476641 BRD4O60885 1362 aaPredicted RBP11.11□□□□□ -0.63
CHD6-207ENST00000476641 COL5A2P05997 1499 aaPredicted RBP11.11□□□□□ -0.63
CHD6-207ENST00000476641 INTS6LQ5JSJ4 861 aaKnown RBP11.1□□□□□ -0.63
CHD6-207ENST00000476641 SV2AQ7L0J3 742 aa11.1□□□□□ -0.63
CHD6-207ENST00000476641 ZBTB33Q86T24 672 aa11.1□□□□□ -0.63
CHD6-207ENST00000476641 ARHGEF25Q86VW2 580 aa11.1□□□□□ -0.63
CHD6-207ENST00000476641 RSPH6AQ9H0K4 717 aa11.1□□□□□ -0.63
CHD6-207ENST00000476641 TTC21AQ8NDW8 1320 aa11.09□□□□□ -0.63
CHD6-207ENST00000476641 BLMP54132 1417 aaPredicted RBP11.09□□□□□ -0.63
CHD6-207ENST00000476641 AKAP12Q02952 1782 aa11.09□□□□□ -0.63
CHD6-207ENST00000476641 THSD7AQ9UPZ6 1657 aa11.09□□□□□ -0.63
CHD6-207ENST00000476641 AATKQ6ZMQ8 1374 aa11.09□□□□□ -0.63
CHD6-207ENST00000476641 SLURP2P0DP57 97 aa11.09□□□□□ -0.63
CHD6-207ENST00000476641 CCER1Q8TC90 406 aaPredicted RBP11.09□□□□□ -0.63
CHD6-207ENST00000476641 POLMQ9NP87 494 aaPredicted RBP11.09□□□□□ -0.63
CHD6-207ENST00000476641 NFAT5O94916 1531 aa11.09□□□□□ -0.63
CHD6-207ENST00000476641 FBLN1P23142 703 aa11.08□□□□□ -0.64
CHD6-207ENST00000476641 IRS1P35568 1242 aa11.08□□□□□ -0.64
CHD6-207ENST00000476641 HDGFL2Q7Z4V5 671 aaPredicted RBP11.08□□□□□ -0.64
CHD6-207ENST00000476641 TCP11L2Q8N4U5 519 aa11.08□□□□□ -0.64
CHD6-207ENST00000476641 LRRN4Q8WUT4 740 aa11.08□□□□□ -0.64
CHD6-207ENST00000476641 EDC4Q6P2E9 1401 aaKnown RBP11.07□□□□□ -0.64
CHD6-207ENST00000476641 MON2Q7Z3U7 1717 aa11.06□□□□□ -0.64
CHD6-207ENST00000476641 USP31Q70CQ4 1352 aa11.06□□□□□ -0.64
CHD6-207ENST00000476641 ARHGEF15O94989 841 aa11.06□□□□□ -0.64
CHD6-207ENST00000476641 TOM1L2Q6ZVM7 507 aa11.06□□□□□ -0.64
CHD6-207ENST00000476641 ZNF395Q9H8N7 513 aaPredicted RBP11.06□□□□□ -0.64
CHD6-207ENST00000476641 COL18A1P39060 1754 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 OVOS2A0A0J9YW53 1432 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 TRIM37O94972 964 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 MARSP56192 900 aaKnown RBP11.05□□□□□ -0.64
CHD6-207ENST00000476641 TMF1P82094 1093 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 CRB1P82279 1406 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 NR6A1Q15406 480 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 OVOS2Q6IE36 1432 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 CCDC125Q86Z20 511 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 RNF217Q8TC41 542 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 PUS7Q96PZ0 661 aaKnown RBP11.05□□□□□ -0.64
CHD6-207ENST00000476641 TERF2IPQ9NYB0 399 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 DNMT3AQ9Y6K1 912 aaPredicted RBP11.05□□□□□ -0.64
CHD6-207ENST00000476641 WDR17Q8IZU2 1322 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 CLSPNQ9HAW4 1339 aa11.05□□□□□ -0.64
CHD6-207ENST00000476641 ZC3H4Q9UPT8 1303 aaKnown RBP11.05□□□□□ -0.64
CHD6-207ENST00000476641 CSB-PGBD3P0DP91 1061 aa11.04□□□□□ -0.64
CHD6-207ENST00000476641 GPAT2Q6NUI2 795 aa11.04□□□□□ -0.64
CHD6-207ENST00000476641 SENP3-EIF4A1A0A087X0R7 540 aa11.03□□□□□ -0.64
CHD6-207ENST00000476641 PTK2Q05397 1052 aa11.03□□□□□ -0.64
CHD6-207ENST00000476641 PDE3BQ13370 1112 aa11.03□□□□□ -0.64
CHD6-207ENST00000476641 SF3B2Q13435 895 aaKnown RBP11.03□□□□□ -0.64
CHD6-207ENST00000476641 PTF1AQ7RTS3 328 aa11.03□□□□□ -0.64
CHD6-207ENST00000476641 OCSTAMPQ9BR26 566 aa11.03□□□□□ -0.64
CHD6-207ENST00000476641 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms