RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	CYP19A1	P11511	503 aa	Predicted RBP	10.01	□□□□□ -0.81
HDAC9-223	ENST00000476135	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
HDAC9-223	ENST00000476135	FMR1	Q06787	632 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
HDAC9-223	ENST00000476135	CAMK2B	Q13554	666 aa		10.01	□□□□□ -0.81
HDAC9-223	ENST00000476135	HABP4	Q5JVS0	413 aa	Known RBP	10.01	□□□□□ -0.81
HDAC9-223	ENST00000476135	DNAJC10	Q8IXB1	793 aa		10.01	□□□□□ -0.81
HDAC9-223	ENST00000476135	GPC2	Q8N158	579 aa		10.01	□□□□□ -0.81
HDAC9-223	ENST00000476135	NFATC2IP	Q8NCF5	419 aa		10.01	□□□□□ -0.81
HDAC9-223	ENST00000476135	FZD9	O00144	591 aa		10	□□□□□ -0.81
HDAC9-223	ENST00000476135	SRGN	P10124	158 aa		10	□□□□□ -0.81
HDAC9-223	ENST00000476135	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10	□□□□□ -0.81
HDAC9-223	ENST00000476135	CCDC93	Q567U6	631 aa		10	□□□□□ -0.81
HDAC9-223	ENST00000476135	CIAPIN1	Q6FI81	312 aa		10	□□□□□ -0.81
HDAC9-223	ENST00000476135	PRR5L	Q6MZQ0	368 aa		10	□□□□□ -0.81
HDAC9-223	ENST00000476135	SAPCD2	Q86UD0	394 aa		10	□□□□□ -0.81
HDAC9-223	ENST00000476135	C7orf43	Q8WVR3	580 aa		10	□□□□□ -0.81
HDAC9-223	ENST00000476135	ZBED2	Q9BTP6	218 aa		10	□□□□□ -0.81
HDAC9-223	ENST00000476135	PCDHGA10	Q9Y5H3	936 aa		10	□□□□□ -0.81
HDAC9-223	ENST00000476135	ST20-MTHFS	A0A0A6YYL1	179 aa		9.99	□□□□□ -0.81
HDAC9-223	ENST00000476135	PPM1G	O15355	546 aa	Predicted RBP	9.99	□□□□□ -0.81
HDAC9-223	ENST00000476135	MTHFS	P49914	203 aa		9.99	□□□□□ -0.81
HDAC9-223	ENST00000476135	AMOT	Q4VCS5	1084 aa		9.99	□□□□□ -0.81
HDAC9-223	ENST00000476135	ZNF530	Q6P9A1	599 aa	Predicted RBP	9.99	□□□□□ -0.81
HDAC9-223	ENST00000476135	BICDL1	Q6ZP65	573 aa		9.99	□□□□□ -0.81
HDAC9-223	ENST00000476135	MASTL	Q96GX5	879 aa		9.99	□□□□□ -0.81
HDAC9-223	ENST00000476135	ZNF277	Q9NRM2	450 aa	Predicted RBP	9.99	□□□□□ -0.81
HDAC9-223	ENST00000476135	PLA2G2E	Q9NZK7	142 aa		9.99	□□□□□ -0.81
HDAC9-223	ENST00000476135	BHMG1	C9JSJ3	638 aa	Predicted RBP	9.98	□□□□□ -0.81
HDAC9-223	ENST00000476135	TRAF5	O00463	557 aa		9.98	□□□□□ -0.81
HDAC9-223	ENST00000476135	LMOD1	P29536	600 aa	Predicted RBP	9.98	□□□□□ -0.81
HDAC9-223	ENST00000476135	TBC1D9B	Q66K14	1250 aa		9.98	□□□□□ -0.81
HDAC9-223	ENST00000476135	USP50	Q70EL3	339 aa	Predicted RBP	9.98	□□□□□ -0.81
HDAC9-223	ENST00000476135	TESK2	Q96S53	571 aa		9.98	□□□□□ -0.81
HDAC9-223	ENST00000476135	SAGE1	Q9NXZ1	904 aa		9.98	□□□□□ -0.81
HDAC9-223	ENST00000476135	ZBTB1	Q9Y2K1	713 aa		9.98	□□□□□ -0.81
HDAC9-223	ENST00000476135	BCOR	Q6W2J9	1755 aa		9.97	□□□□□ -0.81
HDAC9-223	ENST00000476135		A0A087WZG4	1122 aa		9.97	□□□□□ -0.81
HDAC9-223	ENST00000476135	IARS	P41252	1262 aa	Known RBP	9.97	□□□□□ -0.81
HDAC9-223	ENST00000476135	NOG	Q13253	232 aa		9.97	□□□□□ -0.81
HDAC9-223	ENST00000476135	RTKN2	Q8IZC4	609 aa		9.97	□□□□□ -0.81
HDAC9-223	ENST00000476135	CCDC24	Q8N4L8	307 aa		9.97	□□□□□ -0.81
HDAC9-223	ENST00000476135	SCN11A	Q9UI33	1791 aa		9.96	□□□□□ -0.81
HDAC9-223	ENST00000476135	DPYSL4	O14531	572 aa		9.96	□□□□□ -0.82
HDAC9-223	ENST00000476135	CELF2	O95319	508 aa	Known RBP	9.96	□□□□□ -0.82
HDAC9-223	ENST00000476135	EIF4A2	Q14240	407 aa	Known RBP	9.96	□□□□□ -0.82
HDAC9-223	ENST00000476135	C1orf141	Q5JVX7	400 aa		9.96	□□□□□ -0.82
HDAC9-223	ENST00000476135	SCN7A	Q01118	1682 aa		9.96	□□□□□ -0.82
HDAC9-223	ENST00000476135	EPS15	P42566	896 aa		9.95	□□□□□ -0.82
HDAC9-223	ENST00000476135	EIF5	P55010	431 aa	Known RBP	9.95	□□□□□ -0.82
HDAC9-223	ENST00000476135	EIF6	P56537	245 aa	Known RBP	9.95	□□□□□ -0.82
HDAC9-223	ENST00000476135	ST5	P78524	1137 aa		9.95	□□□□□ -0.82
HDAC9-223	ENST00000476135	CTU1	Q7Z7A3	348 aa	Known RBP	9.95	□□□□□ -0.82
HDAC9-223	ENST00000476135	SYNE4	Q8N205	404 aa		9.95	□□□□□ -0.82
HDAC9-223	ENST00000476135	CNBD1	Q8NA66	436 aa		9.95	□□□□□ -0.82
HDAC9-223	ENST00000476135	SPRYD3	Q8NCJ5	442 aa		9.95	□□□□□ -0.82
HDAC9-223	ENST00000476135	JDP2	Q8WYK2	163 aa		9.95	□□□□□ -0.82
HDAC9-223	ENST00000476135	PPP1R3G	B7ZBB8	358 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	NPR1	P16066	1061 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	FXR1	P51114	621 aa	Known RBP eCLIP	9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	SCNN1D	P51172	638 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	AKAP4	Q5JQC9	854 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	TYW1B	Q6NUM6	668 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	VSIG10	Q8N0Z9	540 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	SIN3A	Q96ST3	1273 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	ZIC5	Q96T25	663 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	POLK	Q9UBT6	870 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	HPS5	Q9UPZ3	1129 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	GJA3	Q9Y6H8	435 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	AKAP11	Q9UKA4	1901 aa		9.94	□□□□□ -0.82
HDAC9-223	ENST00000476135	NPHP1	O15259	732 aa		9.93	□□□□□ -0.82
HDAC9-223	ENST00000476135	CANX	P27824	592 aa	Known RBP	9.93	□□□□□ -0.82
HDAC9-223	ENST00000476135	PKN2	Q16513	984 aa	Known RBP	9.93	□□□□□ -0.82
HDAC9-223	ENST00000476135	FBXW7	Q969H0	707 aa		9.93	□□□□□ -0.82
HDAC9-223	ENST00000476135	SETDB2	Q96T68	719 aa		9.93	□□□□□ -0.82
HDAC9-223	ENST00000476135	PSMD1	Q99460	953 aa		9.93	□□□□□ -0.82
HDAC9-223	ENST00000476135	DLL1	O00548	723 aa		9.92	□□□□□ -0.82
HDAC9-223	ENST00000476135	COL9A1	P20849	921 aa		9.92	□□□□□ -0.82
HDAC9-223	ENST00000476135	PTPN5	P54829	565 aa		9.92	□□□□□ -0.82
HDAC9-223	ENST00000476135	MRPL50	Q8N5N7	158 aa	Known RBP	9.92	□□□□□ -0.82
HDAC9-223	ENST00000476135	SLC52A2	Q9HAB3	445 aa		9.92	□□□□□ -0.82
HDAC9-223	ENST00000476135	ADARB2	Q9NS39	739 aa	Known RBP	9.92	□□□□□ -0.82
HDAC9-223	ENST00000476135	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	9.92	□□□□□ -0.82
HDAC9-223	ENST00000476135	PGAP2	Q9UHJ9	254 aa		9.92	□□□□□ -0.82
HDAC9-223	ENST00000476135	KLRG2	A4D1S0	409 aa	Predicted RBP	9.91	□□□□□ -0.82
HDAC9-223	ENST00000476135	STARD3NL	O95772	234 aa		9.91	□□□□□ -0.82
HDAC9-223	ENST00000476135	OLFM4	Q6UX06	510 aa		9.91	□□□□□ -0.82
HDAC9-223	ENST00000476135	CARD14	Q9BXL6	1004 aa		9.91	□□□□□ -0.82
HDAC9-223	ENST00000476135	RNF186	Q9NXI6	227 aa		9.91	□□□□□ -0.82
HDAC9-223	ENST00000476135	SNED1	Q8TER0	1413 aa		9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	COL4A5	P29400	1685 aa		9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	GOLGA8CP	A6NN73	597 aa		9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	FAM155A	B1AL88	458 aa	Predicted RBP	9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	TRPA1	O75762	1119 aa		9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	SLC39A6	Q13433	755 aa		9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	NEUROD1	Q13562	356 aa		9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	PROX2	Q3B8N5	592 aa		9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	THSD4	Q6ZMP0	1018 aa		9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	GLIS2	Q9BZE0	524 aa	Predicted RBP	9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	NBPF3	Q9H094	633 aa		9.9	□□□□□ -0.82
HDAC9-223	ENST00000476135	TBC1D2B	Q9UPU7	963 aa		9.9	□□□□□ -0.82

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