RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 AFDNP55196 1824 aaKnown RBP9.28□□□□□ -0.92
COL11A1-209ENST00000475980 IQCA1LA6NCM1 817 aa9.27□□□□□ -0.93
COL11A1-209ENST00000475980 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.27□□□□□ -0.93
COL11A1-209ENST00000475980 CYP27B1O15528 508 aa9.27□□□□□ -0.93
COL11A1-209ENST00000475980 TLL1O43897 1013 aa9.27□□□□□ -0.93
COL11A1-209ENST00000475980 CHRNA5P30532 468 aa9.27□□□□□ -0.93
COL11A1-209ENST00000475980 HOXC9P31274 260 aa9.27□□□□□ -0.93
COL11A1-209ENST00000475980 NKX1-1Q15270 411 aaPredicted RBP9.27□□□□□ -0.93
COL11A1-209ENST00000475980 NBPF1Q3BBV0 1214 aa9.27□□□□□ -0.93
COL11A1-209ENST00000475980 ARHGEF1Q92888 912 aaKnown RBP9.27□□□□□ -0.93
COL11A1-209ENST00000475980 LTV1Q96GA3 475 aaPredicted RBP9.27□□□□□ -0.93
COL11A1-209ENST00000475980 CNTNAP4Q9C0A0 1308 aa9.27□□□□□ -0.93
COL11A1-209ENST00000475980 ADAMTS7Q9UKP4 1686 aa9.26□□□□□ -0.93
COL11A1-209ENST00000475980 CUL9Q8IWT3 2517 aa9.26□□□□□ -0.93
COL11A1-209ENST00000475980 RFC4P35249 363 aa9.26□□□□□ -0.93
COL11A1-209ENST00000475980 ATP6V1AP38606 617 aa9.26□□□□□ -0.93
COL11A1-209ENST00000475980 DDR1Q08345 913 aa9.26□□□□□ -0.93
COL11A1-209ENST00000475980 KCNMA1Q12791 1236 aa9.26□□□□□ -0.93
COL11A1-209ENST00000475980 BLOC1S3Q6QNY0 202 aa9.26□□□□□ -0.93
COL11A1-209ENST00000475980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.26□□□□□ -0.93
COL11A1-209ENST00000475980 TRPM7Q96QT4 1865 aa9.25□□□□□ -0.93
COL11A1-209ENST00000475980 SZT2Q5T011 3432 aa9.25□□□□□ -0.93
COL11A1-209ENST00000475980 TATP17735 454 aaPredicted RBP9.25□□□□□ -0.93
COL11A1-209ENST00000475980 ECE1P42892 770 aa9.25□□□□□ -0.93
COL11A1-209ENST00000475980 NBPF6Q5VWK0 638 aa9.25□□□□□ -0.93
COL11A1-209ENST00000475980 NBPF4Q96M43 638 aa9.25□□□□□ -0.93
COL11A1-209ENST00000475980 TOR4AQ9NXH8 423 aa9.25□□□□□ -0.93
COL11A1-209ENST00000475980 LTBP3Q9NS15 1303 aa9.25□□□□□ -0.93
COL11A1-209ENST00000475980 NCAPD2Q15021 1401 aa9.24□□□□□ -0.93
COL11A1-209ENST00000475980 RPS6KA4O75676 772 aa9.24□□□□□ -0.93
COL11A1-209ENST00000475980 SLC4A3P48751 1232 aa9.24□□□□□ -0.93
COL11A1-209ENST00000475980 CYP4X1Q8N118 509 aa9.24□□□□□ -0.93
COL11A1-209ENST00000475980 TAF1DQ9H5J8 278 aaPredicted RBP9.24□□□□□ -0.93
COL11A1-209ENST00000475980 SENP2Q9HC62 589 aa9.24□□□□□ -0.93
COL11A1-209ENST00000475980 A0A0C4DFX4 3053 aa9.24□□□□□ -0.93
COL11A1-209ENST00000475980 USP42Q9H9J4 1324 aaKnown RBP9.24□□□□□ -0.93
COL11A1-209ENST00000475980 ARFGEF2Q9Y6D5 1785 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 POLRMTO00411 1230 aaKnown RBP9.23□□□□□ -0.93
COL11A1-209ENST00000475980 MAP2K2P36507 400 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 DGKZQ13574 1117 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 NBR1Q14596 966 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 ERFEQ4G0M1 354 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 NUDT18Q6ZVK8 323 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 TTLL6Q8N841 843 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 CAPNS2Q96L46 248 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 TRIM47Q96LD4 638 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 KRTAP9-2Q9BYQ4 174 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 TMOD3Q9NYL9 352 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 MKI67P46013 3256 aaKnown RBP9.23□□□□□ -0.93
COL11A1-209ENST00000475980 INSRP06213 1382 aa9.23□□□□□ -0.93
COL11A1-209ENST00000475980 PLA2G2CQ5R387 149 aa9.22□□□□□ -0.93
COL11A1-209ENST00000475980 SWT1Q5T5J6 900 aaKnown RBP9.22□□□□□ -0.93
COL11A1-209ENST00000475980 PPARGC1BQ86YN6 1023 aaKnown RBP9.22□□□□□ -0.93
COL11A1-209ENST00000475980 GPR101Q96P66 508 aaPredicted RBP9.22□□□□□ -0.93
COL11A1-209ENST00000475980 ATP13A2Q9NQ11 1180 aa9.22□□□□□ -0.93
COL11A1-209ENST00000475980 ASAP1Q9ULH1 1129 aa9.22□□□□□ -0.93
COL11A1-209ENST00000475980 ABT1Q9ULW3 272 aaKnown RBP9.22□□□□□ -0.93
COL11A1-209ENST00000475980 DDNO94850 711 aaPredicted RBP9.21□□□□□ -0.94
COL11A1-209ENST00000475980 TM4SF1P30408 202 aa9.21□□□□□ -0.94
COL11A1-209ENST00000475980 HABP4Q5JVS0 413 aaKnown RBP9.21□□□□□ -0.94
COL11A1-209ENST00000475980 PNMA8AQ86V59 439 aaPredicted RBP9.21□□□□□ -0.94
COL11A1-209ENST00000475980 COL11A2P13942 1736 aaPredicted RBP9.2□□□□□ -0.94
COL11A1-209ENST00000475980 ANKRD31Q8N7Z5 1873 aa9.2□□□□□ -0.94
COL11A1-209ENST00000475980 AMPHP49418 695 aa9.2□□□□□ -0.94
COL11A1-209ENST00000475980 BRPF1P55201 1214 aaPredicted RBP9.2□□□□□ -0.94
COL11A1-209ENST00000475980 SOX10P56693 466 aa9.2□□□□□ -0.94
COL11A1-209ENST00000475980 TMEM151AQ8N4L1 468 aa9.2□□□□□ -0.94
COL11A1-209ENST00000475980 USHBP1Q8N6Y0 703 aa9.2□□□□□ -0.94
COL11A1-209ENST00000475980 SLC4A9Q96Q91 983 aa9.2□□□□□ -0.94
COL11A1-209ENST00000475980 ATG3Q9NT62 314 aa9.2□□□□□ -0.94
COL11A1-209ENST00000475980 KRTAP9-6A0A140TA67 174 aa9.19□□□□□ -0.94
COL11A1-209ENST00000475980 HDGFL2Q7Z4V5 671 aaPredicted RBP9.19□□□□□ -0.94
COL11A1-209ENST00000475980 CNTROBQ8N137 903 aa9.19□□□□□ -0.94
COL11A1-209ENST00000475980 NBPF15Q8N660 670 aa9.19□□□□□ -0.94
COL11A1-209ENST00000475980 IRF7Q92985 503 aa9.19□□□□□ -0.94
COL11A1-209ENST00000475980 DDX21Q9NR30 783 aaKnown RBP eCLIP9.19□□□□□ -0.94
COL11A1-209ENST00000475980 A0A1W2PP64 1363 aa9.19□□□□□ -0.94
COL11A1-209ENST00000475980 KIF24Q5T7B8 1368 aa9.19□□□□□ -0.94
COL11A1-209ENST00000475980 TJP1Q07157 1748 aa9.19□□□□□ -0.94
COL11A1-209ENST00000475980 DPYSL4O14531 572 aa9.18□□□□□ -0.94
COL11A1-209ENST00000475980 GSK3AP49840 483 aa9.18□□□□□ -0.94
COL11A1-209ENST00000475980 PSMG3-AS1Q96PY0 264 aa9.18□□□□□ -0.94
COL11A1-209ENST00000475980 TAOK3Q9H2K8 898 aa9.18□□□□□ -0.94
COL11A1-209ENST00000475980 SRP68Q9UHB9 627 aaKnown RBP9.18□□□□□ -0.94
COL11A1-209ENST00000475980 HACL1Q9UJ83 578 aa9.18□□□□□ -0.94
COL11A1-209ENST00000475980 EPHX2P34913 555 aa9.17□□□□□ -0.94
COL11A1-209ENST00000475980 CYP4F22Q6NT55 531 aa9.17□□□□□ -0.94
COL11A1-209ENST00000475980 HHIPL1Q96JK4 782 aa9.17□□□□□ -0.94
COL11A1-209ENST00000475980 TERF2IPQ9NYB0 399 aa9.17□□□□□ -0.94
COL11A1-209ENST00000475980 TONSLQ96HA7 1378 aa9.16□□□□□ -0.94
COL11A1-209ENST00000475980 H0YIN7 160 aa9.16□□□□□ -0.94
COL11A1-209ENST00000475980 FXR1P51114 621 aaKnown RBP eCLIP9.16□□□□□ -0.94
COL11A1-209ENST00000475980 EAPPQ56P03 285 aaPredicted RBP9.16□□□□□ -0.94
COL11A1-209ENST00000475980 MAP1SQ66K74 1059 aaPredicted RBP9.16□□□□□ -0.94
COL11A1-209ENST00000475980 C2CD5Q86YS7 1000 aa9.16□□□□□ -0.94
COL11A1-209ENST00000475980 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
COL11A1-209ENST00000475980 KIFC2Q96AC6 838 aa9.16□□□□□ -0.94
COL11A1-209ENST00000475980 COG3Q96JB2 828 aa9.16□□□□□ -0.94
COL11A1-209ENST00000475980 SPG7Q9UQ90 795 aa9.16□□□□□ -0.94
COL11A1-209ENST00000475980 TLL2Q9Y6L7 1015 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms