RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 SP8Q8IXZ3 490 aa19.41■□□□□ 0.7
CSNK2B-207ENST00000475875 MPNDQ8N594 471 aa19.41■□□□□ 0.7
CSNK2B-207ENST00000475875 COL3A1P02461 1466 aaPredicted RBP19.41■□□□□ 0.7
CSNK2B-207ENST00000475875 U2SURPO15042 1029 aaKnown RBP19.4■□□□□ 0.7
CSNK2B-207ENST00000475875 SHTN1A0MZ66 631 aa19.39■□□□□ 0.69
CSNK2B-207ENST00000475875 RPS12P25398 132 aaKnown RBP19.39■□□□□ 0.69
CSNK2B-207ENST00000475875 DLK2Q6UY11 383 aa19.39■□□□□ 0.69
CSNK2B-207ENST00000475875 PPP1R42Q7Z4L9 355 aa19.39■□□□□ 0.69
CSNK2B-207ENST00000475875 ZNF34Q8IZ26 560 aa19.39■□□□□ 0.69
CSNK2B-207ENST00000475875 ZNF296Q8WUU4 475 aaPredicted RBP19.39■□□□□ 0.69
CSNK2B-207ENST00000475875 ABCC4O15439 1325 aa19.39■□□□□ 0.69
CSNK2B-207ENST00000475875 YDJCA8MPS7 323 aa19.38■□□□□ 0.69
CSNK2B-207ENST00000475875 NUP98P52948 1817 aa19.38■□□□□ 0.69
CSNK2B-207ENST00000475875 FKBP1BP68106 108 aa19.38■□□□□ 0.69
CSNK2B-207ENST00000475875 PARP10Q53GL7 1025 aa19.38■□□□□ 0.69
CSNK2B-207ENST00000475875 SLC10A5Q5PT55 438 aa19.38■□□□□ 0.69
CSNK2B-207ENST00000475875 C3orf67Q6ZVT6 689 aa19.38■□□□□ 0.69
CSNK2B-207ENST00000475875 SAMD7Q7Z3H4 446 aa19.38■□□□□ 0.69
CSNK2B-207ENST00000475875 RASAL3Q86YV0 1011 aa19.38■□□□□ 0.69
CSNK2B-207ENST00000475875 RTF1Q92541 710 aaKnown RBP19.38■□□□□ 0.69
CSNK2B-207ENST00000475875 PCGF6Q9BYE7 350 aa19.38■□□□□ 0.69
CSNK2B-207ENST00000475875 ADM5C9JUS6 153 aa19.37■□□□□ 0.69
CSNK2B-207ENST00000475875 GPTP24298 496 aa19.37■□□□□ 0.69
CSNK2B-207ENST00000475875 FXR1P51114 621 aaKnown RBP eCLIP19.37■□□□□ 0.69
CSNK2B-207ENST00000475875 SULF1Q8IWU6 871 aa19.37■□□□□ 0.69
CSNK2B-207ENST00000475875 TBC1D10BQ4KMP7 808 aaPredicted RBP19.36■□□□□ 0.69
CSNK2B-207ENST00000475875 TMC4Q7Z404 712 aa19.36■□□□□ 0.69
CSNK2B-207ENST00000475875 PHACTR3Q96KR7 559 aa19.36■□□□□ 0.69
CSNK2B-207ENST00000475875 ZBTB12Q9Y330 459 aaPredicted RBP19.36■□□□□ 0.69
CSNK2B-207ENST00000475875 LAMB4A4D0S4 1761 aa19.35■□□□□ 0.69
CSNK2B-207ENST00000475875 HTATSF1O43719 755 aaKnown RBP19.35■□□□□ 0.69
CSNK2B-207ENST00000475875 HSPA5P11021 654 aaKnown RBP19.35■□□□□ 0.69
CSNK2B-207ENST00000475875 TTLL7Q6ZT98 887 aa19.35■□□□□ 0.69
CSNK2B-207ENST00000475875 PSMD14O00487 310 aa19.34■□□□□ 0.69
CSNK2B-207ENST00000475875 PRKAR2BP31323 418 aa19.34■□□□□ 0.69
CSNK2B-207ENST00000475875 GIGYF2Q6Y7W6 1299 aaKnown RBP19.34■□□□□ 0.69
CSNK2B-207ENST00000475875 GPR25O00155 361 aa19.33■□□□□ 0.68
CSNK2B-207ENST00000475875 EGFRP00533 1210 aa19.33■□□□□ 0.68
CSNK2B-207ENST00000475875 INTS3Q68E01 1043 aaKnown RBP19.33■□□□□ 0.68
CSNK2B-207ENST00000475875 NGEFQ8N5V2 710 aa19.33■□□□□ 0.68
CSNK2B-207ENST00000475875 RSPH6AQ9H0K4 717 aa19.33■□□□□ 0.68
CSNK2B-207ENST00000475875 TAF7Q15545 349 aaPredicted RBP19.32■□□□□ 0.68
CSNK2B-207ENST00000475875 KIF4BQ2VIQ3 1234 aa19.32■□□□□ 0.68
CSNK2B-207ENST00000475875 MCM10Q7L590 875 aa19.32■□□□□ 0.68
CSNK2B-207ENST00000475875 CDCA5Q96FF9 252 aa19.32■□□□□ 0.68
CSNK2B-207ENST00000475875 UTP14AQ9BVJ6 771 aaKnown RBP19.32■□□□□ 0.68
CSNK2B-207ENST00000475875 CFHR5Q9BXR6 569 aa19.32■□□□□ 0.68
CSNK2B-207ENST00000475875 ZBTB3Q9H5J0 574 aa19.32■□□□□ 0.68
CSNK2B-207ENST00000475875 TBC1D8O95759 1140 aa19.31■□□□□ 0.68
CSNK2B-207ENST00000475875 GRAPQ13588 217 aa19.31■□□□□ 0.68
CSNK2B-207ENST00000475875 GRAPLQ8TC17 118 aaPredicted RBP19.31■□□□□ 0.68
CSNK2B-207ENST00000475875 GGA3Q9NZ52 723 aa19.31■□□□□ 0.68
CSNK2B-207ENST00000475875 POLR2AP24928 1970 aaKnown RBP19.3■□□□□ 0.68
CSNK2B-207ENST00000475875 HTTP42858 3142 aa19.3■□□□□ 0.68
CSNK2B-207ENST00000475875 PAPPA2Q9BXP8 1791 aa19.3■□□□□ 0.68
CSNK2B-207ENST00000475875 TM4SF4P48230 202 aa19.3■□□□□ 0.68
CSNK2B-207ENST00000475875 DDX46Q7L014 1031 aaKnown RBP19.3■□□□□ 0.68
CSNK2B-207ENST00000475875 DUOX1Q9NRD9 1551 aa19.3■□□□□ 0.68
CSNK2B-207ENST00000475875 ERBB4Q15303 1308 aa19.29■□□□□ 0.68
CSNK2B-207ENST00000475875 WASHC4Q2M389 1173 aa19.29■□□□□ 0.68
CSNK2B-207ENST00000475875 RBM26Q5T8P6 1007 aaKnown RBP19.29■□□□□ 0.68
CSNK2B-207ENST00000475875 PNISRQ8TF01 805 aaKnown RBP19.29■□□□□ 0.68
CSNK2B-207ENST00000475875 RRP7AQ9Y3A4 280 aaKnown RBP19.29■□□□□ 0.68
CSNK2B-207ENST00000475875 PER1O15534 1290 aaPredicted RBP19.28■□□□□ 0.68
CSNK2B-207ENST00000475875 FKTNO75072 461 aa19.28■□□□□ 0.68
CSNK2B-207ENST00000475875 NECTIN2Q92692 538 aa19.28■□□□□ 0.68
CSNK2B-207ENST00000475875 CC2D1BQ5T0F9 858 aaKnown RBP19.27■□□□□ 0.68
CSNK2B-207ENST00000475875 ANKRD36CQ5JPF3 1778 aa19.27■□□□□ 0.67
CSNK2B-207ENST00000475875 ZNF609O15014 1411 aa19.26■□□□□ 0.67
CSNK2B-207ENST00000475875 MYL6BP14649 208 aa19.26■□□□□ 0.67
CSNK2B-207ENST00000475875 SREBF2Q12772 1141 aa19.26■□□□□ 0.67
CSNK2B-207ENST00000475875 DBNDD1Q9H9R9 158 aa19.26■□□□□ 0.67
CSNK2B-207ENST00000475875 PITPNM2Q9BZ72 1349 aa19.25■□□□□ 0.67
CSNK2B-207ENST00000475875 LRRC37AA6NMS7 1700 aa19.25■□□□□ 0.67
CSNK2B-207ENST00000475875 RTL9Q8NET4 1388 aa19.25■□□□□ 0.67
CSNK2B-207ENST00000475875 ECE2O60344 883 aa19.24■□□□□ 0.67
CSNK2B-207ENST00000475875 VIL1P09327 827 aaKnown RBP19.24■□□□□ 0.67
CSNK2B-207ENST00000475875 ZNF280AP59817 542 aaPredicted RBP19.24■□□□□ 0.67
CSNK2B-207ENST00000475875 DCTN1Q14203 1278 aa19.24■□□□□ 0.67
CSNK2B-207ENST00000475875 EYA3Q99504 573 aa19.24■□□□□ 0.67
CSNK2B-207ENST00000475875 NUDCQ9Y266 331 aa19.24■□□□□ 0.67
CSNK2B-207ENST00000475875 POTEFA5A3E0 1075 aa19.23■□□□□ 0.67
CSNK2B-207ENST00000475875 HSP90AB3PQ58FF7 597 aa19.23■□□□□ 0.67
CSNK2B-207ENST00000475875 ANGEL2Q5VTE6 544 aaKnown RBP19.23■□□□□ 0.67
CSNK2B-207ENST00000475875 CENPFP49454 3210 aa19.23■□□□□ 0.67
CSNK2B-207ENST00000475875 BRCA2P51587 3418 aa19.23■□□□□ 0.67
CSNK2B-207ENST00000475875 DDX60Q8IY21 1712 aaKnown RBP19.22■□□□□ 0.67
CSNK2B-207ENST00000475875 SZT2Q5T011 3432 aa19.22■□□□□ 0.67
CSNK2B-207ENST00000475875 ALDH1A1P00352 501 aa19.22■□□□□ 0.67
CSNK2B-207ENST00000475875 EIF4A1P60842 406 aaKnown RBP19.22■□□□□ 0.67
CSNK2B-207ENST00000475875 CFAP53Q96M91 514 aa19.22■□□□□ 0.67
CSNK2B-207ENST00000475875 NSFL1CQ9UNZ2 370 aaKnown RBP19.22■□□□□ 0.67
CSNK2B-207ENST00000475875 ASTN2O75129 1339 aaPredicted RBP19.22■□□□□ 0.67
CSNK2B-207ENST00000475875 RBBP6Q7Z6E9 1792 aaKnown RBP19.21■□□□□ 0.67
CSNK2B-207ENST00000475875 HCLS1P14317 486 aaPredicted RBP19.21■□□□□ 0.67
CSNK2B-207ENST00000475875 SCARF1Q14162 830 aa19.21■□□□□ 0.67
CSNK2B-207ENST00000475875 AGBL3Q8NEM8 1001 aa19.21■□□□□ 0.67
CSNK2B-207ENST00000475875 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.67
CSNK2B-207ENST00000475875 KIAA0100Q14667 2235 aaKnown RBP19.21■□□□□ 0.67
CSNK2B-207ENST00000475875 LAMB2P55268 1798 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms