RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 ARSIQ5FYB1 569 aa13.94□□□□□ -0.18
CALD1-217ENST00000475772 OLFM4Q6UX06 510 aa13.94□□□□□ -0.18
CALD1-217ENST00000475772 CFAP53Q96M91 514 aa13.94□□□□□ -0.18
CALD1-217ENST00000475772 MIS18AQ9NYP9 233 aa13.94□□□□□ -0.18
CALD1-217ENST00000475772 HSPA1AP0DMV8 641 aaKnown RBP13.93□□□□□ -0.18
CALD1-217ENST00000475772 HSPA1BP0DMV9 641 aaKnown RBP13.93□□□□□ -0.18
CALD1-217ENST00000475772 NPM2Q86SE8 214 aaKnown RBP13.93□□□□□ -0.18
CALD1-217ENST00000475772 NBPF5PQ86XG9 351 aaPredicted RBP13.93□□□□□ -0.18
CALD1-217ENST00000475772 NUDCQ9Y266 331 aa13.93□□□□□ -0.18
CALD1-217ENST00000475772 NUP98P52948 1817 aa13.92□□□□□ -0.18
CALD1-217ENST00000475772 HTATSF1O43719 755 aaKnown RBP13.92□□□□□ -0.18
CALD1-217ENST00000475772 TAF7Q15545 349 aaPredicted RBP13.92□□□□□ -0.18
CALD1-217ENST00000475772 RTF1Q92541 710 aaKnown RBP13.92□□□□□ -0.18
CALD1-217ENST00000475772 NIP7Q9Y221 180 aaKnown RBP eCLIP13.92□□□□□ -0.18
CALD1-217ENST00000475772 SCN4AP35499 1836 aa13.92□□□□□ -0.18
CALD1-217ENST00000475772 FAM177BA6PVY3 158 aa13.91□□□□□ -0.18
CALD1-217ENST00000475772 NPHP1O15259 732 aa13.91□□□□□ -0.18
CALD1-217ENST00000475772 NPR1P16066 1061 aa13.91□□□□□ -0.18
CALD1-217ENST00000475772 TPTE2Q6XPS3 522 aa13.91□□□□□ -0.18
CALD1-217ENST00000475772 KHSRPQ92945 711 aaKnown RBP eCLIP13.91□□□□□ -0.18
CALD1-217ENST00000475772 PASKQ96RG2 1323 aa13.9□□□□□ -0.18
CALD1-217ENST00000475772 CCDC93Q567U6 631 aa13.9□□□□□ -0.18
CALD1-217ENST00000475772 SOGA3Q5TF21 947 aa13.9□□□□□ -0.18
CALD1-217ENST00000475772 TBC1D12O60347 775 aa13.89□□□□□ -0.19
CALD1-217ENST00000475772 FKBP4Q02790 459 aaKnown RBP eCLIP13.89□□□□□ -0.19
CALD1-217ENST00000475772 PLEKHF1Q96S99 279 aa13.89□□□□□ -0.19
CALD1-217ENST00000475772 TAF1DQ9H5J8 278 aaPredicted RBP13.89□□□□□ -0.19
CALD1-217ENST00000475772 ZNF277Q9NRM2 450 aaPredicted RBP13.89□□□□□ -0.19
CALD1-217ENST00000475772 ZNF652Q9Y2D9 606 aa13.89□□□□□ -0.19
CALD1-217ENST00000475772 SNED1Q8TER0 1413 aa13.89□□□□□ -0.19
CALD1-217ENST00000475772 ZNF541Q9H0D2 1346 aa13.89□□□□□ -0.19
CALD1-217ENST00000475772 ITGBL1O95965 494 aaPredicted RBP13.88□□□□□ -0.19
CALD1-217ENST00000475772 TNS4Q8IZW8 715 aa13.88□□□□□ -0.19
CALD1-217ENST00000475772 MKRN1Q9UHC7 482 aaKnown RBP13.88□□□□□ -0.19
CALD1-217ENST00000475772 ARIH1Q9Y4X5 557 aaPredicted RBP13.88□□□□□ -0.19
CALD1-217ENST00000475772 KDM3BQ7LBC6 1761 aa13.88□□□□□ -0.19
CALD1-217ENST00000475772 LAMB4A4D0S4 1761 aa13.87□□□□□ -0.19
CALD1-217ENST00000475772 FZD9O00144 591 aa13.87□□□□□ -0.19
CALD1-217ENST00000475772 EIF4A1P60842 406 aaKnown RBP13.87□□□□□ -0.19
CALD1-217ENST00000475772 TTLL7Q6ZT98 887 aa13.87□□□□□ -0.19
CALD1-217ENST00000475772 SLC51AQ86UW1 340 aa13.87□□□□□ -0.19
CALD1-217ENST00000475772 NUTM1Q86Y26 1132 aa13.87□□□□□ -0.19
CALD1-217ENST00000475772 SYNE4Q8N205 404 aa13.87□□□□□ -0.19
CALD1-217ENST00000475772 NGEFQ8N5V2 710 aa13.87□□□□□ -0.19
CALD1-217ENST00000475772 ADAMTSL1Q8N6G6 1762 aa13.86□□□□□ -0.19
CALD1-217ENST00000475772 ABCC12Q96J65 1359 aa13.86□□□□□ -0.19
CALD1-217ENST00000475772 NUDT7P0C024 238 aa13.86□□□□□ -0.19
CALD1-217ENST00000475772 ALDH1B1P30837 517 aa13.86□□□□□ -0.19
CALD1-217ENST00000475772 CRY2Q49AN0 593 aa13.86□□□□□ -0.19
CALD1-217ENST00000475772 LDHDQ86WU2 507 aa13.86□□□□□ -0.19
CALD1-217ENST00000475772 KCNV2Q8TDN2 545 aa13.86□□□□□ -0.19
CALD1-217ENST00000475772 THUMPD2Q9BTF0 503 aaKnown RBP13.86□□□□□ -0.19
CALD1-217ENST00000475772 IQCA1LA6NCM1 817 aa13.85□□□□□ -0.19
CALD1-217ENST00000475772 ERVV-1B6SEH8 477 aa13.85□□□□□ -0.19
CALD1-217ENST00000475772 IARSP41252 1262 aaKnown RBP13.85□□□□□ -0.19
CALD1-217ENST00000475772 MAP3K9P80192 1104 aa13.85□□□□□ -0.19
CALD1-217ENST00000475772 RTKN2Q8IZC4 609 aa13.85□□□□□ -0.19
CALD1-217ENST00000475772 MARVELD3Q96A59 401 aa13.85□□□□□ -0.19
CALD1-217ENST00000475772 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
CALD1-217ENST00000475772 MAP3K15Q6ZN16 1313 aa13.85□□□□□ -0.19
CALD1-217ENST00000475772 COL4A5P29400 1685 aa13.85□□□□□ -0.19
CALD1-217ENST00000475772 CNTNAP1P78357 1384 aa13.84□□□□□ -0.19
CALD1-217ENST00000475772 DPYSL4O14531 572 aa13.84□□□□□ -0.19
CALD1-217ENST00000475772 SUSD4Q5VX71 490 aa13.84□□□□□ -0.19
CALD1-217ENST00000475772 UBN2Q6ZU65 1347 aa13.84□□□□□ -0.19
CALD1-217ENST00000475772 LRP10Q7Z4F1 713 aa13.83□□□□□ -0.2
CALD1-217ENST00000475772 ZNF34Q8IZ26 560 aa13.83□□□□□ -0.2
CALD1-217ENST00000475772 PNISRQ8TF01 805 aaKnown RBP13.83□□□□□ -0.2
CALD1-217ENST00000475772 PSMD1Q99460 953 aa13.83□□□□□ -0.2
CALD1-217ENST00000475772 HACL1Q9UJ83 578 aa13.83□□□□□ -0.2
CALD1-217ENST00000475772 LTBP1Q14766 1721 aa13.83□□□□□ -0.2
CALD1-217ENST00000475772 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
CALD1-217ENST00000475772 FOXN1O15353 648 aa13.82□□□□□ -0.2
CALD1-217ENST00000475772 MYL6BP14649 208 aa13.82□□□□□ -0.2
CALD1-217ENST00000475772 GPTP24298 496 aa13.82□□□□□ -0.2
CALD1-217ENST00000475772 GTF2E1P29083 439 aaPredicted RBP13.82□□□□□ -0.2
CALD1-217ENST00000475772 HOXA10P31260 410 aaPredicted RBP13.82□□□□□ -0.2
CALD1-217ENST00000475772 EPHX2P34913 555 aa13.82□□□□□ -0.2
CALD1-217ENST00000475772 VEGFBP49765 207 aa13.82□□□□□ -0.2
CALD1-217ENST00000475772 PDIA6Q15084 440 aa13.82□□□□□ -0.2
CALD1-217ENST00000475772 NFE2L2Q16236 605 aa13.82□□□□□ -0.2
CALD1-217ENST00000475772 EAPPQ56P03 285 aaPredicted RBP13.82□□□□□ -0.2
CALD1-217ENST00000475772 TMEM88BA6NKF7 163 aa13.81□□□□□ -0.2
CALD1-217ENST00000475772 MAP1SQ66K74 1059 aaPredicted RBP13.81□□□□□ -0.2
CALD1-217ENST00000475772 CNTROBQ8N137 903 aa13.81□□□□□ -0.2
CALD1-217ENST00000475772 NYXQ9GZU5 481 aa13.81□□□□□ -0.2
CALD1-217ENST00000475772 ZBTB3Q9H5J0 574 aa13.81□□□□□ -0.2
CALD1-217ENST00000475772 EVI5O60447 810 aa13.8□□□□□ -0.2
CALD1-217ENST00000475772 NTSR2O95665 410 aa13.8□□□□□ -0.2
CALD1-217ENST00000475772 EMP3P54852 163 aa13.8□□□□□ -0.2
CALD1-217ENST00000475772 FMR1Q06787 632 aaKnown RBP eCLIP13.8□□□□□ -0.2
CALD1-217ENST00000475772 GIGYF2Q6Y7W6 1299 aaKnown RBP13.8□□□□□ -0.2
CALD1-217ENST00000475772 GPC2Q8N158 579 aa13.8□□□□□ -0.2
CALD1-217ENST00000475772 CC2D2BQ6DHV5 1058 aa13.79□□□□□ -0.2
CALD1-217ENST00000475772 PNMA8AQ86V59 439 aaPredicted RBP13.79□□□□□ -0.2
CALD1-217ENST00000475772 CRAMP1Q96RY5 1269 aa13.79□□□□□ -0.2
CALD1-217ENST00000475772 RIC1Q4ADV7 1423 aa13.79□□□□□ -0.2
CALD1-217ENST00000475772 EPS15P42566 896 aa13.78□□□□□ -0.2
CALD1-217ENST00000475772 SCNN1DP51172 638 aa13.78□□□□□ -0.2
CALD1-217ENST00000475772 PROSER3Q2NL68 480 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms