RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 C3orf67Q6ZVT6 689 aa18.58■□□□□ 0.56
FAM3A-218ENST00000475657 SP8Q8IXZ3 490 aa18.58■□□□□ 0.56
FAM3A-218ENST00000475657 REM2Q8IYK8 340 aaPredicted RBP18.58■□□□□ 0.56
FAM3A-218ENST00000475657 C2orf69Q8N8R5 385 aa18.58■□□□□ 0.56
FAM3A-218ENST00000475657 DPF2Q92785 391 aa18.58■□□□□ 0.56
FAM3A-218ENST00000475657 GBA2Q9HCG7 927 aaPredicted RBP18.58■□□□□ 0.56
FAM3A-218ENST00000475657 RAD17O75943 681 aa18.57■□□□□ 0.56
FAM3A-218ENST00000475657 PARP10Q53GL7 1025 aa18.57■□□□□ 0.56
FAM3A-218ENST00000475657 TTLL7Q6ZT98 887 aa18.57■□□□□ 0.56
FAM3A-218ENST00000475657 PPP1R42Q7Z4L9 355 aa18.57■□□□□ 0.56
FAM3A-218ENST00000475657 MPNDQ8N594 471 aa18.57■□□□□ 0.56
FAM3A-218ENST00000475657 PKN2Q16513 984 aaKnown RBP18.56■□□□□ 0.56
FAM3A-218ENST00000475657 GIGYF2Q6Y7W6 1299 aaKnown RBP18.56■□□□□ 0.56
FAM3A-218ENST00000475657 NGEFQ8N5V2 710 aa18.56■□□□□ 0.56
FAM3A-218ENST00000475657 GCC1Q96CN9 775 aa18.56■□□□□ 0.56
FAM3A-218ENST00000475657 NUP98P52948 1817 aa18.56■□□□□ 0.56
FAM3A-218ENST00000475657 ABCC4O15439 1325 aa18.55■□□□□ 0.56
FAM3A-218ENST00000475657 ZNF157P51786 506 aaPredicted RBP18.55■□□□□ 0.56
FAM3A-218ENST00000475657 KRT26Q7Z3Y9 468 aa18.55■□□□□ 0.56
FAM3A-218ENST00000475657 MICALL2Q8IY33 904 aa18.55■□□□□ 0.56
FAM3A-218ENST00000475657 CSRNP1Q96S65 589 aa18.55■□□□□ 0.56
FAM3A-218ENST00000475657 SLC10A3P09131 477 aa18.54■□□□□ 0.56
FAM3A-218ENST00000475657 ZBTB3Q9H5J0 574 aa18.54■□□□□ 0.56
FAM3A-218ENST00000475657 HPS5Q9UPZ3 1129 aa18.54■□□□□ 0.56
FAM3A-218ENST00000475657 SHTN1A0MZ66 631 aa18.53■□□□□ 0.56
FAM3A-218ENST00000475657 YDJCA8MPS7 323 aa18.53■□□□□ 0.56
FAM3A-218ENST00000475657 DCTN1Q14203 1278 aa18.53■□□□□ 0.56
FAM3A-218ENST00000475657 DLK2Q6UY11 383 aa18.53■□□□□ 0.56
FAM3A-218ENST00000475657 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
FAM3A-218ENST00000475657 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
FAM3A-218ENST00000475657 RRP7AQ9Y3A4 280 aaKnown RBP18.53■□□□□ 0.56
FAM3A-218ENST00000475657 CFAP53Q96M91 514 aa18.52■□□□□ 0.56
FAM3A-218ENST00000475657 UTP14AQ9BVJ6 771 aaKnown RBP18.52■□□□□ 0.56
FAM3A-218ENST00000475657 ERBB4Q15303 1308 aa18.51■□□□□ 0.55
FAM3A-218ENST00000475657 LAMB4A4D0S4 1761 aa18.51■□□□□ 0.55
FAM3A-218ENST00000475657 SAMD7Q7Z3H4 446 aa18.51■□□□□ 0.55
FAM3A-218ENST00000475657 TMC4Q7Z404 712 aa18.51■□□□□ 0.55
FAM3A-218ENST00000475657 DCPSQ96C86 337 aaKnown RBP18.51■□□□□ 0.55
FAM3A-218ENST00000475657 RPS12P25398 132 aaKnown RBP18.5■□□□□ 0.55
FAM3A-218ENST00000475657 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
FAM3A-218ENST00000475657 ZBTB12Q9Y330 459 aaPredicted RBP18.5■□□□□ 0.55
FAM3A-218ENST00000475657 AKAP11Q9UKA4 1901 aa18.49■□□□□ 0.55
FAM3A-218ENST00000475657 MYL6BP14649 208 aa18.49■□□□□ 0.55
FAM3A-218ENST00000475657 ADM5C9JUS6 153 aa18.48■□□□□ 0.55
FAM3A-218ENST00000475657 U2AF1L5P0DN76 240 aaPredicted RBP18.48■□□□□ 0.55
FAM3A-218ENST00000475657 EIF4A1P60842 406 aaKnown RBP18.48■□□□□ 0.55
FAM3A-218ENST00000475657 U2AF1Q01081 240 aaKnown RBP eCLIP18.48■□□□□ 0.55
FAM3A-218ENST00000475657 GRAPQ13588 217 aa18.48■□□□□ 0.55
FAM3A-218ENST00000475657 TBC1D10BQ4KMP7 808 aaPredicted RBP18.48■□□□□ 0.55
FAM3A-218ENST00000475657 DDX46Q7L014 1031 aaKnown RBP18.48■□□□□ 0.55
FAM3A-218ENST00000475657 GRAPLQ8TC17 118 aaPredicted RBP18.48■□□□□ 0.55
FAM3A-218ENST00000475657 PSMD14O00487 310 aa18.47■□□□□ 0.55
FAM3A-218ENST00000475657 EGFRP00533 1210 aa18.47■□□□□ 0.55
FAM3A-218ENST00000475657 NOM1Q5C9Z4 860 aaKnown RBP18.47■□□□□ 0.55
FAM3A-218ENST00000475657 SULF1Q8IWU6 871 aa18.47■□□□□ 0.55
FAM3A-218ENST00000475657 FKBP1BP68106 108 aa18.46■□□□□ 0.55
FAM3A-218ENST00000475657 WASHC4Q2M389 1173 aa18.46■□□□□ 0.55
FAM3A-218ENST00000475657 LRP10Q7Z4F1 713 aa18.45■□□□□ 0.54
FAM3A-218ENST00000475657 RASAL3Q86YV0 1011 aa18.45■□□□□ 0.54
FAM3A-218ENST00000475657 HDAC9Q9UKV0 1011 aa18.45■□□□□ 0.54
FAM3A-218ENST00000475657 POLR2AP24928 1970 aaKnown RBP18.44■□□□□ 0.54
FAM3A-218ENST00000475657 DUOX1Q9NRD9 1551 aa18.44■□□□□ 0.54
FAM3A-218ENST00000475657 ZNF296Q8WUU4 475 aaPredicted RBP18.44■□□□□ 0.54
FAM3A-218ENST00000475657 HCLS1P14317 486 aaPredicted RBP18.43■□□□□ 0.54
FAM3A-218ENST00000475657 KIF4BQ2VIQ3 1234 aa18.43■□□□□ 0.54
FAM3A-218ENST00000475657 HSP90AB3PQ58FF7 597 aa18.43■□□□□ 0.54
FAM3A-218ENST00000475657 HABP4Q5JVS0 413 aaKnown RBP18.43■□□□□ 0.54
FAM3A-218ENST00000475657 RBM26Q5T8P6 1007 aaKnown RBP18.43■□□□□ 0.54
FAM3A-218ENST00000475657 FBXO46Q6PJ61 603 aaPredicted RBP18.43■□□□□ 0.54
FAM3A-218ENST00000475657 CDCA5Q96FF9 252 aa18.43■□□□□ 0.54
FAM3A-218ENST00000475657 NLRP10Q86W26 655 aa18.42■□□□□ 0.54
FAM3A-218ENST00000475657 DBNDD1Q9H9R9 158 aa18.42■□□□□ 0.54
FAM3A-218ENST00000475657 GGA3Q9NZ52 723 aa18.42■□□□□ 0.54
FAM3A-218ENST00000475657 ANKRD36CQ5JPF3 1778 aa18.42■□□□□ 0.54
FAM3A-218ENST00000475657 PDIA6Q15084 440 aa18.41■□□□□ 0.54
FAM3A-218ENST00000475657 NSFL1CQ9UNZ2 370 aaKnown RBP18.41■□□□□ 0.54
FAM3A-218ENST00000475657 SH3TC1Q8TE82 1336 aa18.41■□□□□ 0.54
FAM3A-218ENST00000475657 RTL9Q8NET4 1388 aa18.41■□□□□ 0.54
FAM3A-218ENST00000475657 KDM3BQ7LBC6 1761 aa18.4■□□□□ 0.54
FAM3A-218ENST00000475657 VIL1P09327 827 aaKnown RBP18.4■□□□□ 0.54
FAM3A-218ENST00000475657 NECTIN2Q92692 538 aa18.4■□□□□ 0.54
FAM3A-218ENST00000475657 GPR25O00155 361 aa18.39■□□□□ 0.53
FAM3A-218ENST00000475657 ECE2O60344 883 aa18.39■□□□□ 0.53
FAM3A-218ENST00000475657 TBC1D8O95759 1140 aa18.39■□□□□ 0.53
FAM3A-218ENST00000475657 TM4SF4P48230 202 aa18.39■□□□□ 0.53
FAM3A-218ENST00000475657 EYA3Q99504 573 aa18.39■□□□□ 0.53
FAM3A-218ENST00000475657 CFHR5Q9BXR6 569 aa18.39■□□□□ 0.53
FAM3A-218ENST00000475657 TRMT112Q9UI30 125 aaKnown RBP18.39■□□□□ 0.53
FAM3A-218ENST00000475657 LRRC37AA6NMS7 1700 aa18.38■□□□□ 0.53
FAM3A-218ENST00000475657 ZNF280AP59817 542 aaPredicted RBP18.38■□□□□ 0.53
FAM3A-218ENST00000475657 KCNQ5Q9NR82 932 aa18.38■□□□□ 0.53
FAM3A-218ENST00000475657 POLLQ9UGP5 575 aa18.38■□□□□ 0.53
FAM3A-218ENST00000475657 ZNF609O15014 1411 aa18.38■□□□□ 0.53
FAM3A-218ENST00000475657 C6orf229H3BNL8 230 aa18.37■□□□□ 0.53
FAM3A-218ENST00000475657 RIMBP2O15034 1052 aa18.37■□□□□ 0.53
FAM3A-218ENST00000475657 TCIRG1Q13488 830 aa18.37■□□□□ 0.53
FAM3A-218ENST00000475657 SF3B3Q15393 1217 aaKnown RBP18.37■□□□□ 0.53
FAM3A-218ENST00000475657 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
FAM3A-218ENST00000475657 ASTN2O75129 1339 aaPredicted RBP18.37■□□□□ 0.53
FAM3A-218ENST00000475657 PITPNM2Q9BZ72 1349 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms