RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 DDX54Q8TDD1 881 aaKnown RBP20.87■□□□□ 0.93
CCM2-207ENST00000475551 SNRKQ9NRH2 765 aa20.87■□□□□ 0.93
CCM2-207ENST00000475551 ACEP12821 1306 aa20.87■□□□□ 0.93
CCM2-207ENST00000475551 SLC27A2O14975 620 aa20.87■□□□□ 0.93
CCM2-207ENST00000475551 NBPF7P0C2Y1 421 aaPredicted RBP20.87■□□□□ 0.93
CCM2-207ENST00000475551 CCZ1BP86790 482 aa20.87■□□□□ 0.93
CCM2-207ENST00000475551 CCZ1P86791 482 aaPredicted RBP20.87■□□□□ 0.93
CCM2-207ENST00000475551 GPATCH3Q96I76 525 aa20.87■□□□□ 0.93
CCM2-207ENST00000475551 TIGD1Q96MW7 591 aa20.87■□□□□ 0.93
CCM2-207ENST00000475551 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
CCM2-207ENST00000475551 HIP1O00291 1037 aa20.86■□□□□ 0.93
CCM2-207ENST00000475551 ARID5BQ14865 1188 aa20.86■□□□□ 0.93
CCM2-207ENST00000475551 ELF2Q15723 593 aa20.86■□□□□ 0.93
CCM2-207ENST00000475551 CCAR2Q8N163 923 aaKnown RBP20.86■□□□□ 0.93
CCM2-207ENST00000475551 USP6P35125 1406 aa20.86■□□□□ 0.93
CCM2-207ENST00000475551 SBNO1A3KN83 1393 aa20.86■□□□□ 0.93
CCM2-207ENST00000475551 FLT4P35916 1363 aa20.86■□□□□ 0.93
CCM2-207ENST00000475551 RGPD8O14715 1765 aaPredicted RBP20.86■□□□□ 0.93
CCM2-207ENST00000475551 PLEKHG3A1L390 1219 aa20.86■□□□□ 0.93
CCM2-207ENST00000475551 CTAGE5O15320 804 aa20.86■□□□□ 0.93
CCM2-207ENST00000475551 BLOC1S2Q6QNY1 142 aa20.86■□□□□ 0.93
CCM2-207ENST00000475551 EYA1Q99502 592 aa20.86■□□□□ 0.93
CCM2-207ENST00000475551 ERBB3P21860 1342 aa20.85■□□□□ 0.93
CCM2-207ENST00000475551 CCDC69A6NI79 296 aa20.85■□□□□ 0.93
CCM2-207ENST00000475551 KCNJ4P48050 445 aa20.85■□□□□ 0.93
CCM2-207ENST00000475551 HDGFL1Q5TGJ6 251 aa20.85■□□□□ 0.93
CCM2-207ENST00000475551 CALCOCO1Q9P1Z2 691 aa20.85■□□□□ 0.93
CCM2-207ENST00000475551 RPS6KB1P23443 525 aa20.85■□□□□ 0.93
CCM2-207ENST00000475551 TAF7Q15545 349 aaPredicted RBP20.85■□□□□ 0.93
CCM2-207ENST00000475551 STX1AQ16623 288 aa20.85■□□□□ 0.93
CCM2-207ENST00000475551 ATF3P18847 181 aa20.84■□□□□ 0.93
CCM2-207ENST00000475551 OS9Q13438 667 aaPredicted RBP20.84■□□□□ 0.93
CCM2-207ENST00000475551 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.84■□□□□ 0.93
CCM2-207ENST00000475551 V9GYY5 206 aaPredicted RBP20.84■□□□□ 0.93
CCM2-207ENST00000475551 RESTQ13127 1097 aa20.84■□□□□ 0.93
CCM2-207ENST00000475551 MTX1Q13505 466 aa20.84■□□□□ 0.93
CCM2-207ENST00000475551 TOB2Q14106 344 aaPredicted RBP20.84■□□□□ 0.93
CCM2-207ENST00000475551 BEND3Q5T5X7 828 aa20.84■□□□□ 0.93
CCM2-207ENST00000475551 C11orf57Q6ZUT1 292 aaPredicted RBP20.84■□□□□ 0.93
CCM2-207ENST00000475551 IRX5P78411 483 aaPredicted RBP20.83■□□□□ 0.93
CCM2-207ENST00000475551 BMS1Q14692 1282 aaKnown RBP20.83■□□□□ 0.92
CCM2-207ENST00000475551 CFAP45Q9UL16 551 aa20.83■□□□□ 0.92
CCM2-207ENST00000475551 ADCY9O60503 1353 aa20.83■□□□□ 0.92
CCM2-207ENST00000475551 ZSCAN16Q9H4T2 348 aaPredicted RBP20.82■□□□□ 0.92
CCM2-207ENST00000475551 ZNF446Q9NWS9 450 aa20.82■□□□□ 0.92
CCM2-207ENST00000475551 TOPAZ1Q8N9V7 1692 aa20.82■□□□□ 0.92
CCM2-207ENST00000475551 H2AFXP16104 143 aaPredicted RBP20.82■□□□□ 0.92
CCM2-207ENST00000475551 GSDMDP57764 484 aa20.82■□□□□ 0.92
CCM2-207ENST00000475551 COL9A3Q14050 684 aaPredicted RBP20.82■□□□□ 0.92
CCM2-207ENST00000475551 IL17REQ8NFR9 667 aa20.82■□□□□ 0.92
CCM2-207ENST00000475551 L2HGDHQ9H9P8 463 aa20.82■□□□□ 0.92
CCM2-207ENST00000475551 USP16Q9Y5T5 823 aa20.82■□□□□ 0.92
CCM2-207ENST00000475551 ANKARQ7Z5J8 1434 aa20.82■□□□□ 0.92
CCM2-207ENST00000475551 IFIT2P09913 472 aaKnown RBP20.81■□□□□ 0.92
CCM2-207ENST00000475551 TSGA10IPQ3SY00 556 aa20.81■□□□□ 0.92
CCM2-207ENST00000475551 ERC1Q8IUD2 1116 aa20.81■□□□□ 0.92
CCM2-207ENST00000475551 TRMT1Q9NXH9 659 aaKnown RBP20.81■□□□□ 0.92
CCM2-207ENST00000475551 BECN2A8MW95 431 aa20.81■□□□□ 0.92
CCM2-207ENST00000475551 SLC20A2Q08357 652 aa20.81■□□□□ 0.92
CCM2-207ENST00000475551 NMIQ13287 307 aaPredicted RBP20.81■□□□□ 0.92
CCM2-207ENST00000475551 DNAAF4Q8WXU2 420 aa20.81■□□□□ 0.92
CCM2-207ENST00000475551 FAM227BQ96M60 508 aa20.81■□□□□ 0.92
CCM2-207ENST00000475551 BCL11BQ9C0K0 894 aaPredicted RBP20.81■□□□□ 0.92
CCM2-207ENST00000475551 DCCP43146 1447 aa20.81■□□□□ 0.92
CCM2-207ENST00000475551 ZBTB22O15209 634 aa20.8■□□□□ 0.92
CCM2-207ENST00000475551 SOX12O15370 315 aa20.8■□□□□ 0.92
CCM2-207ENST00000475551 DHX40Q8IX18 779 aaKnown RBP20.8■□□□□ 0.92
CCM2-207ENST00000475551 FILIP1Q7Z7B0 1213 aa20.8■□□□□ 0.92
CCM2-207ENST00000475551 CADPS2Q86UW7 1296 aa20.8■□□□□ 0.92
CCM2-207ENST00000475551 HMG20BQ9P0W2 317 aa20.8■□□□□ 0.92
CCM2-207ENST00000475551 ESCO1Q5FWF5 840 aa20.79■□□□□ 0.92
CCM2-207ENST00000475551 OSBPL5Q9H0X9 879 aaPredicted RBP20.79■□□□□ 0.92
CCM2-207ENST00000475551 MST1RQ04912 1400 aa20.79■□□□□ 0.92
CCM2-207ENST00000475551 TULP2O00295 520 aa20.79■□□□□ 0.92
CCM2-207ENST00000475551 CDK11BP21127 795 aaKnown RBP20.79■□□□□ 0.92
CCM2-207ENST00000475551 TCEANC2Q96MN5 208 aa20.79■□□□□ 0.92
CCM2-207ENST00000475551 NOL10Q9BSC4 688 aaKnown RBP20.79■□□□□ 0.92
CCM2-207ENST00000475551 ANO10Q9NW15 660 aa20.79■□□□□ 0.92
CCM2-207ENST00000475551 IMPACTQ9P2X3 320 aa20.79■□□□□ 0.92
CCM2-207ENST00000475551 CYP2C19P33261 490 aa20.78■□□□□ 0.92
CCM2-207ENST00000475551 GTF3C6Q969F1 213 aa20.78■□□□□ 0.92
CCM2-207ENST00000475551 ORAI2Q96SN7 254 aa20.78■□□□□ 0.92
CCM2-207ENST00000475551 C1orf167Q5SNV9 1468 aa20.78■□□□□ 0.92
CCM2-207ENST00000475551 TUBB4AP04350 444 aa20.78■□□□□ 0.92
CCM2-207ENST00000475551 BRF1Q92994 677 aa20.78■□□□□ 0.92
CCM2-207ENST00000475551 ST7Q9NRC1 585 aa20.78■□□□□ 0.92
CCM2-207ENST00000475551 JCADQ9P266 1359 aa20.77■□□□□ 0.92
CCM2-207ENST00000475551 STK3Q13188 491 aa20.77■□□□□ 0.92
CCM2-207ENST00000475551 SNW1Q13573 536 aaKnown RBP20.77■□□□□ 0.92
CCM2-207ENST00000475551 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
CCM2-207ENST00000475551 ERICH4A6NGS2 130 aa20.77■□□□□ 0.91
CCM2-207ENST00000475551 AMPHP49418 695 aa20.77■□□□□ 0.91
CCM2-207ENST00000475551 RCOR1Q9UKL0 485 aa20.77■□□□□ 0.91
CCM2-207ENST00000475551 FHOD1Q9Y613 1164 aa20.77■□□□□ 0.91
CCM2-207ENST00000475551 MED23Q9ULK4 1368 aa20.77■□□□□ 0.91
CCM2-207ENST00000475551 PI4KAP2A4QPH2 592 aa20.76■□□□□ 0.91
CCM2-207ENST00000475551 JAK2O60674 1132 aa20.76■□□□□ 0.91
CCM2-207ENST00000475551 KCNJ6P48051 423 aa20.76■□□□□ 0.91
CCM2-207ENST00000475551 CCAR1Q8IX12 1150 aaKnown RBP20.76■□□□□ 0.91
CCM2-207ENST00000475551 PI4KAP1Q8N8J0 262 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms