RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PTCD1O75127 700 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 MRE11P49959 708 aa7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 MPNDQ8N594 471 aa7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 BACH2Q9BYV9 841 aa7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 PPP1R1BQ9UD71 204 aaPredicted RBP7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 KIF3AQ9Y496 699 aa7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 GAPVD1Q14C86 1478 aa7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 FSD2A1L4K1 749 aa7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 P4HBP07237 508 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 BMP2P12643 396 aa7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 SETDB1Q15047 1291 aa7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 AGERQ15109 404 aa7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 HELQQ8TDG4 1101 aa7.37□□□□□ -1.23
ECHDC1-215ENST00000475319 PHLDB1Q86UU1 1377 aa7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 NINLQ9Y2I6 1382 aa7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 KIF1CO43896 1103 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 ADAMTS2O95450 1211 aa7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 C4orf48Q5BLP8 95 aa7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 TSHZ1Q6ZSZ6 1077 aa7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 SV2AQ7L0J3 742 aa7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 BAP1Q92560 729 aa7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 FOXJ1Q92949 421 aa7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 SLC10A4Q96EP9 437 aa7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 TIGD1Q96MW7 591 aa7.36□□□□□ -1.23
ECHDC1-215ENST00000475319 M0R2N6 131 aa7.35□□□□□ -1.23
ECHDC1-215ENST00000475319 CCDC172P0C7W6 258 aa7.35□□□□□ -1.23
ECHDC1-215ENST00000475319 ERCC5P28715 1186 aaPredicted RBP7.35□□□□□ -1.23
ECHDC1-215ENST00000475319 MRPL58Q14197 206 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-215ENST00000475319 TMC7Q7Z402 723 aa7.35□□□□□ -1.23
ECHDC1-215ENST00000475319 BPHLQ86WA6 291 aaPredicted RBP7.35□□□□□ -1.23
ECHDC1-215ENST00000475319 TMTC2Q8N394 836 aa7.35□□□□□ -1.23
ECHDC1-215ENST00000475319 NCAPGQ9BPX3 1015 aa7.35□□□□□ -1.23
ECHDC1-215ENST00000475319 BRMS1Q9HCU9 246 aa7.35□□□□□ -1.23
ECHDC1-215ENST00000475319 SOS2Q07890 1332 aaPredicted RBP7.35□□□□□ -1.23
ECHDC1-215ENST00000475319 TULP2O00295 520 aa7.34□□□□□ -1.23
ECHDC1-215ENST00000475319 CELA2BP08218 269 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-215ENST00000475319 LINC01559Q495D7 138 aa7.34□□□□□ -1.23
ECHDC1-215ENST00000475319 C9orf131Q5VYM1 1079 aa7.34□□□□□ -1.23
ECHDC1-215ENST00000475319 MNS1Q8NEH6 495 aa7.34□□□□□ -1.23
ECHDC1-215ENST00000475319 COL26A1Q96A83 441 aa7.34□□□□□ -1.23
ECHDC1-215ENST00000475319 MYH16Q9H6N6 1097 aa7.34□□□□□ -1.23
ECHDC1-215ENST00000475319 DNMT3LQ9UJW3 386 aa7.34□□□□□ -1.23
ECHDC1-215ENST00000475319 CLASP1Q7Z460 1538 aa7.34□□□□□ -1.23
ECHDC1-215ENST00000475319 FAM13AO94988 1023 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 XRCC6P12956 609 aaKnown RBP eCLIP7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 KCNJ4P48050 445 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 HDLBPQ00341 1268 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 HDAC1Q13547 482 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 RINLQ6ZS11 566 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 EXOC8Q8IYI6 725 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 UBXN4Q92575 508 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 MKL1Q969V6 931 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 RBCK1Q9BYM8 510 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 SMC4Q9NTJ3 1288 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 ZNF358Q9NW07 568 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 CALCOCO1Q9P1Z2 691 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 MRVI1Q9Y6F6 885 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 CUX1P39880 1505 aa7.33□□□□□ -1.24
ECHDC1-215ENST00000475319 SCAMP3O14828 347 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 SMARCA5O60264 1052 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 NPR3P17342 541 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 MPSTP25325 297 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 RAB15P59190 212 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 PTSQ03393 145 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 SRSF11Q05519 484 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 GABPB1Q06547 395 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 FAM50AQ14320 339 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 SF3A1Q15459 793 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 ZMYM1Q5SVZ6 1142 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 LCE1DQ5T752 114 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 CREBRFQ8IUR6 639 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 FAM210AQ96ND0 272 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 KIF16BQ96L93 1317 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 ABCA10Q8WWZ4 1543 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 IGFBP4P22692 258 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 SH3BP2P78314 561 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 MTA1Q13330 715 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 CCDC96Q2M329 555 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 LDLRAD1Q5T700 205 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 SEPT12Q8IYM1 358 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 VWA5B2Q8N398 1253 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 ZNF511Q8NB15 262 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 TMC1Q8TDI8 760 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 TRIM52Q96A61 297 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 KLF16Q9BXK1 252 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 TLL2Q9Y6L7 1015 aa7.32□□□□□ -1.24
ECHDC1-215ENST00000475319 UQCRHLA0A096LP55 91 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 LOC102724159A0A0B4J2E5 919 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 TREHO43280 583 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 FOXO3O43524 673 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 NDUFB5O43674 189 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 FRAT2O75474 233 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 MYCP01106 439 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 UQCRHP07919 91 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 SCTRP47872 440 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 FMR1Q06787 632 aaKnown RBP eCLIP7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 PWP2Q15269 919 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms