RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-211	ENST00000475315	GORAB	Q5T7V8	394 aa		13.75	□□□□□ -0.21
FXR1-211	ENST00000475315	G2E3	Q7L622	706 aa		13.75	□□□□□ -0.21
FXR1-211	ENST00000475315	CCDC150	Q8NCX0	1101 aa		13.75	□□□□□ -0.21
FXR1-211	ENST00000475315	JAKMIP1	Q96N16	626 aa	Known RBP	13.75	□□□□□ -0.21
FXR1-211	ENST00000475315	STAG3	Q9UJ98	1225 aa		13.75	□□□□□ -0.21
FXR1-211	ENST00000475315	MAP4K4	O95819	1239 aa	Predicted RBP	13.75	□□□□□ -0.21
FXR1-211	ENST00000475315	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.75	□□□□□ -0.21
FXR1-211	ENST00000475315	NOM1	Q5C9Z4	860 aa	Known RBP	13.75	□□□□□ -0.21
FXR1-211	ENST00000475315	CCDC34	Q96HJ3	373 aa		13.75	□□□□□ -0.21
FXR1-211	ENST00000475315	CARD6	Q9BX69	1037 aa		13.75	□□□□□ -0.21
FXR1-211	ENST00000475315	CYP46A1	Q9Y6A2	500 aa		13.75	□□□□□ -0.21
FXR1-211	ENST00000475315	IVL	P07476	585 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	EVC	P57679	992 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	MNS1	Q8NEH6	495 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	EPC1	Q9H2F5	836 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	DNAI1	Q9UI46	699 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	SPG7	Q9UQ90	795 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	PARP3	Q9Y6F1	533 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	ITSN1	Q15811	1721 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	BECN2	A8MW95	431 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	CTAGE5	O15320	804 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	IFIT2	P09913	472 aa	Known RBP	13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	PTH1R	Q03431	593 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	SLC4A10	Q6U841	1118 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	GPR161	Q8N6U8	529 aa	Known RBP	13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	EMILIN1	Q9Y6C2	1016 aa		13.74	□□□□□ -0.21
FXR1-211	ENST00000475315	ATP7B	P35670	1465 aa		13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	MAP2K7	O14733	419 aa		13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	PRR29	P0C7W0	189 aa		13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	LARP1	Q6PKG0	1096 aa	Known RBP	13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	NUTM1	Q86Y26	1132 aa		13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	SUGP1	Q8IWZ8	645 aa	Known RBP	13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	DRC1	Q96MC2	740 aa		13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	TOMM22	Q9NS69	142 aa		13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	NPAT	Q14207	1427 aa		13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	EIF3CL	B5ME19	914 aa	Known RBP	13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	RSRC2	Q7L4I2	434 aa	Known RBP	13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	EIF3C	Q99613	913 aa	Known RBP	13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	IL1RAPL2	Q9NP60	686 aa		13.73	□□□□□ -0.21
FXR1-211	ENST00000475315	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	SWT1	Q5T5J6	900 aa	Known RBP	13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	FOXR1	Q6PIV2	292 aa		13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	AOPEP	Q8N6M6	819 aa		13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	ARFGAP3	Q9NP61	516 aa		13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	ARHGEF10	O15013	1369 aa		13.72	□□□□□ -0.21
FXR1-211	ENST00000475315		A0A087WWV3	80 aa		13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	CP	P00450	1065 aa		13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	CORO7	P57737	925 aa		13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	REST	Q13127	1097 aa		13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	NECTIN1	Q15223	517 aa		13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	CWC27	Q6UX04	472 aa	Known RBP	13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	ANO10	Q9NW15	660 aa		13.72	□□□□□ -0.21
FXR1-211	ENST00000475315	URI1	O94763	535 aa	Predicted RBP	13.71	□□□□□ -0.21
FXR1-211	ENST00000475315	MYCN	P04198	464 aa	Predicted RBP	13.71	□□□□□ -0.21
FXR1-211	ENST00000475315	GSC	P56915	257 aa	Predicted RBP	13.71	□□□□□ -0.21
FXR1-211	ENST00000475315	PRPF40B	Q6NWY9	871 aa	Known RBP	13.71	□□□□□ -0.21
FXR1-211	ENST00000475315	HOMER1	Q86YM7	354 aa		13.71	□□□□□ -0.21
FXR1-211	ENST00000475315	CNTROB	Q8N137	903 aa		13.71	□□□□□ -0.21
FXR1-211	ENST00000475315	SOS1	Q07889	1333 aa	Predicted RBP	13.71	□□□□□ -0.21
FXR1-211	ENST00000475315	SFPQ	P23246	707 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	COL9A3	Q14050	684 aa	Predicted RBP	13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	LEKR1	Q6ZMV7	388 aa		13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	PARD6B	Q9BYG5	372 aa		13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	CCP110	O43303	1012 aa		13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	BRD2	P25440	801 aa	Known RBP	13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	DHX8	Q14562	1220 aa	Known RBP	13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	SART3	Q15020	963 aa	Known RBP	13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	TMC6	Q7Z403	805 aa		13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	PPM1E	Q8WY54	764 aa		13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	XPO4	Q9C0E2	1151 aa	Known RBP	13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	GOLPH3L	Q9H4A5	285 aa		13.7	□□□□□ -0.22
FXR1-211	ENST00000475315	CRB1	P82279	1406 aa		13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	PSME1	Q06323	249 aa		13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	LONRF2	Q1L5Z9	754 aa		13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	CEP57L1	Q8IYX8	460 aa		13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	ENGASE	Q8NFI3	743 aa		13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	SSH3	Q8TE77	659 aa		13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	SMC2	O95347	1197 aa		13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	MAP3K9	P80192	1104 aa		13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	DDX54	Q8TDD1	881 aa	Known RBP	13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	7e-7	■□□□□ 9.9
FXR1-211	ENST00000475315	CABP1	Q9NZU7	370 aa		13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	FAM208A	Q9UK61	1670 aa	Known RBP	13.69	□□□□□ -0.22
FXR1-211	ENST00000475315	KIDINS220	Q9ULH0	1771 aa		13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	CCDC172	P0C7W6	258 aa		13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	ADD1	P35611	737 aa	Known RBP	13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	NBPF6	Q5VWK0	638 aa		13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	MSL3	Q8N5Y2	521 aa	Known RBP	13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	RABGGTA	Q92696	567 aa		13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	NBPF4	Q96M43	638 aa		13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	DEF6	Q9H4E7	631 aa		13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	CEP83	Q9Y592	693 aa		13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	NRK	Q7Z2Y5	1582 aa		13.68	□□□□□ -0.22
FXR1-211	ENST00000475315	USP42	Q9H9J4	1324 aa	Known RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms