RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 NBPF6Q5VWK0 638 aa16.19■□□□□ 0.18
SEMA4D-217ENST00000475255 NBPF4Q96M43 638 aa16.19■□□□□ 0.18
SEMA4D-217ENST00000475255 ST7Q9NRC1 585 aa16.19■□□□□ 0.18
SEMA4D-217ENST00000475255 ZNF215Q9UL58 517 aaPredicted RBP16.19■□□□□ 0.18
SEMA4D-217ENST00000475255 CEP135Q66GS9 1140 aa16.18■□□□□ 0.18
SEMA4D-217ENST00000475255 TSPOAP1O95153 1857 aa16.18■□□□□ 0.18
SEMA4D-217ENST00000475255 GOLGA6L19H0YKK7 550 aa16.18■□□□□ 0.18
SEMA4D-217ENST00000475255 ZBTB22O15209 634 aa16.18■□□□□ 0.18
SEMA4D-217ENST00000475255 PDCP20941 246 aa16.18■□□□□ 0.18
SEMA4D-217ENST00000475255 HDGFP51858 240 aaKnown RBP16.18■□□□□ 0.18
SEMA4D-217ENST00000475255 G3BP1Q13283 466 aaKnown RBP eCLIP16.18■□□□□ 0.18
SEMA4D-217ENST00000475255 TDRD7Q8NHU6 1098 aaKnown RBP16.18■□□□□ 0.18
SEMA4D-217ENST00000475255 DDX19AQ9NUU7 478 aaKnown RBP16.18■□□□□ 0.18
SEMA4D-217ENST00000475255 PSMA5P28066 241 aa16.17■□□□□ 0.18
SEMA4D-217ENST00000475255 PIP4K2AP48426 406 aaPredicted RBP16.17■□□□□ 0.18
SEMA4D-217ENST00000475255 FGD1P98174 961 aa16.17■□□□□ 0.18
SEMA4D-217ENST00000475255 SIRT1Q96EB6 747 aa16.17■□□□□ 0.18
SEMA4D-217ENST00000475255 KAZALD1Q96I82 304 aa16.17■□□□□ 0.18
SEMA4D-217ENST00000475255 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
SEMA4D-217ENST00000475255 ELP1O95163 1332 aa16.17■□□□□ 0.18
SEMA4D-217ENST00000475255 USP42Q9H9J4 1324 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-217ENST00000475255 SKILP12757 684 aa16.17■□□□□ 0.18
SEMA4D-217ENST00000475255 KCNB2Q92953 911 aa16.17■□□□□ 0.18
SEMA4D-217ENST00000475255 TECPR2O15040 1411 aa16.16■□□□□ 0.18
SEMA4D-217ENST00000475255 CCT2P78371 535 aaKnown RBP16.16■□□□□ 0.18
SEMA4D-217ENST00000475255 Q6ZUG5 572 aa16.16■□□□□ 0.18
SEMA4D-217ENST00000475255 ERICH4A6NGS2 130 aa16.16■□□□□ 0.18
SEMA4D-217ENST00000475255 ZNF530Q6P9A1 599 aaPredicted RBP16.16■□□□□ 0.18
SEMA4D-217ENST00000475255 LRRC8AQ8IWT6 810 aa16.16■□□□□ 0.18
SEMA4D-217ENST00000475255 GOLPH3LQ9H4A5 285 aa16.16■□□□□ 0.18
SEMA4D-217ENST00000475255 ADAMTS13Q76LX8 1427 aa16.16■□□□□ 0.18
SEMA4D-217ENST00000475255 DNAJC2Q99543 621 aaKnown RBP16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 OGFRQ9NZT2 677 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 BECN2A8MW95 431 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 ELF2Q15723 593 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 CHST3Q7LGC8 479 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 CCAR1Q8IX12 1150 aaKnown RBP16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 PTPRUQ92729 1446 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 TMEM2Q9UHN6 1383 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 A0A0G2JLW4 131 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 CCDC69A6NI79 296 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 RESTQ13127 1097 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 KMT5BQ4FZB7 885 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 RNF20Q5VTR2 975 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 FMNL2Q96PY5 1086 aa16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 NCOA5Q9HCD5 579 aaKnown RBP16.15■□□□□ 0.18
SEMA4D-217ENST00000475255 NPHP4O75161 1426 aaPredicted RBP16.14■□□□□ 0.17
SEMA4D-217ENST00000475255 IQCB1Q15051 598 aa16.14■□□□□ 0.17
SEMA4D-217ENST00000475255 MYL6BP14649 208 aa16.14■□□□□ 0.17
SEMA4D-217ENST00000475255 COL15A1P39059 1388 aa16.14■□□□□ 0.17
SEMA4D-217ENST00000475255 PTPN14Q15678 1187 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 EPHA10Q5JZY3 1008 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 LRRN4CLQ8ND94 238 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 TAF5LO75529 589 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 KIF20AO95235 890 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 TRERF1Q96PN7 1200 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 FMN2Q9NZ56 1722 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 GRM8O00222 908 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 SCRN1Q12765 414 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 DDX46Q7L014 1031 aaKnown RBP16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 AOPEPQ8N6M6 819 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 KIF18AQ8NI77 898 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 GTF3C6Q969F1 213 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 FEZ1Q99689 392 aa16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 DBF4Q9UBU7 674 aaPredicted RBP16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 DDX41Q9UJV9 622 aaKnown RBP16.13■□□□□ 0.17
SEMA4D-217ENST00000475255 PTPN21Q16825 1174 aa16.12■□□□□ 0.17
SEMA4D-217ENST00000475255 OTUD7BQ6GQQ9 843 aa16.12■□□□□ 0.17
SEMA4D-217ENST00000475255 RBM43Q6ZSC3 357 aaKnown RBP16.12■□□□□ 0.17
SEMA4D-217ENST00000475255 NEK1Q96PY6 1258 aa16.12■□□□□ 0.17
SEMA4D-217ENST00000475255 USP28Q96RU2 1077 aa16.12■□□□□ 0.17
SEMA4D-217ENST00000475255 TNRQ92752 1358 aa16.12■□□□□ 0.17
SEMA4D-217ENST00000475255 ISM2Q6H9L7 571 aa16.12■□□□□ 0.17
SEMA4D-217ENST00000475255 KSR2Q6VAB6 950 aa16.12■□□□□ 0.17
SEMA4D-217ENST00000475255 ERC1Q8IUD2 1116 aa16.12■□□□□ 0.17
SEMA4D-217ENST00000475255 RGPD8O14715 1765 aaPredicted RBP16.11■□□□□ 0.17
SEMA4D-217ENST00000475255 BIN1O00499 593 aa16.11■□□□□ 0.17
SEMA4D-217ENST00000475255 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
SEMA4D-217ENST00000475255 MTX1Q13505 466 aa16.11■□□□□ 0.17
SEMA4D-217ENST00000475255 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
SEMA4D-217ENST00000475255 FBXO38Q6PIJ6 1188 aa16.11■□□□□ 0.17
SEMA4D-217ENST00000475255 RAB11FIP4Q86YS3 637 aa16.11■□□□□ 0.17
SEMA4D-217ENST00000475255 ZBTB9Q96C00 473 aa16.11■□□□□ 0.17
SEMA4D-217ENST00000475255 PAXBP1Q9Y5B6 917 aa16.11■□□□□ 0.17
SEMA4D-217ENST00000475255 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
SEMA4D-217ENST00000475255 NALCNQ8IZF0 1738 aa16.11■□□□□ 0.17
SEMA4D-217ENST00000475255 CYP21A2P08686 494 aa16.1■□□□□ 0.17
SEMA4D-217ENST00000475255 ME1P48163 572 aa16.1■□□□□ 0.17
SEMA4D-217ENST00000475255 GORABQ5T7V8 394 aa16.1■□□□□ 0.17
SEMA4D-217ENST00000475255 STOX1Q6ZVD7 989 aa16.1■□□□□ 0.17
SEMA4D-217ENST00000475255 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.1■□□□□ 0.17
SEMA4D-217ENST00000475255 SLFN14P0C7P3 912 aa16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 CCZ1BP86790 482 aa16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 CCZ1P86791 482 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 RIC3Q7Z5B4 369 aa16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 DHX40Q8IX18 779 aaKnown RBP16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 FSIP1Q8NA03 581 aa16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 BBXQ8WY36 941 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 DBNLQ9UJU6 430 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms