RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
VAPB-204ENST00000475243 RNF216Q9NWF9 866 aaPredicted RBP12.58□□□□□ -0.4
VAPB-204ENST00000475243 TERF1P54274 439 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 RGS22Q8NE09 1264 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 ZNF830Q96NB3 372 aaPredicted RBP12.57□□□□□ -0.4
VAPB-204ENST00000475243 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
VAPB-204ENST00000475243 PIK3R4Q99570 1358 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 SYKP43405 635 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 XAGE3Q8WTP9 111 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 TAOK3Q9H2K8 898 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 STAT6P42226 847 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 SNW1Q13573 536 aaKnown RBP12.57□□□□□ -0.4
VAPB-204ENST00000475243 PLS1Q14651 629 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 COPS6Q7L5N1 327 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 VTI1AQ96AJ9 217 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 TTC21BQ7Z4L5 1316 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 MARCKSP29966 332 aaPredicted RBP12.57□□□□□ -0.4
VAPB-204ENST00000475243 CTR9Q6PD62 1173 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 ALG1Q9BT22 464 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 MAATS1Q7Z4T9 603 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 BRF1Q92994 677 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 N4BP3O15049 544 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 STAMBPO95630 424 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 SDSP20132 328 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 CCDC174Q6PII3 467 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 HOMER2Q9NSB8 354 aa12.57□□□□□ -0.4
VAPB-204ENST00000475243 ZBTB43O43298 467 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 PTGS1P23219 599 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 UBE2HP62256 183 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 TICAM2Q86XR7 235 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 SYNCQ9H7C4 482 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 HCLS1P14317 486 aaPredicted RBP12.56□□□□□ -0.4
VAPB-204ENST00000475243 ZNF354CQ86Y25 554 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 UBASH3AP57075 661 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 C16orf71Q8IYS4 520 aaPredicted RBP12.56□□□□□ -0.4
VAPB-204ENST00000475243 JAG2Q9Y219 1238 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 STXBP4Q6ZWJ1 553 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 NAA15Q9BXJ9 866 aaKnown RBP12.56□□□□□ -0.4
VAPB-204ENST00000475243 CNPY2Q9Y2B0 182 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 TBCAO75347 108 aaKnown RBP12.56□□□□□ -0.4
VAPB-204ENST00000475243 RHPN1Q8TCX5 695 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 FAM107BQ9H098 131 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
VAPB-204ENST00000475243 ARID5AQ03989 594 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 DPH6Q7L8W6 267 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 FAM114A1Q8IWE2 563 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 PRXQ9BXM0 1461 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 TTC21AQ8NDW8 1320 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 Q6ZUG5 572 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 GSDMDP57764 484 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 ZCRB1Q8TBF4 217 aaKnown RBP12.55□□□□□ -0.4
VAPB-204ENST00000475243 KANK3Q6NY19 840 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 GNG11P61952 73 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 RTN1Q16799 776 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 RBM26Q5T8P6 1007 aaKnown RBP12.55□□□□□ -0.4
VAPB-204ENST00000475243 RRAGBQ5VZM2 374 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 TMX3Q96JJ7 454 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 CALM1P0DP23 149 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 CALM2P0DP24 149 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 CALM3P0DP25 149 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
VAPB-204ENST00000475243 BMP2KLQ5H9B9 411 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 PA2G4Q9UQ80 394 aaKnown RBP12.54□□□□□ -0.4
VAPB-204ENST00000475243 CABLES1Q8TDN4 633 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 NIP7Q9Y221 180 aaKnown RBP eCLIP12.54□□□□□ -0.4
VAPB-204ENST00000475243 FSD2A1L4K1 749 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 C8orf37Q96NL8 207 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 CEP135Q66GS9 1140 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 CEP63Q96MT8 703 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 HMG20BQ9P0W2 317 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 CLEC11AQ9Y240 323 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 PHACTR2O75167 634 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 ZSCAN23Q3MJ62 389 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 ANO6Q4KMQ2 910 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 RBM8AQ9Y5S9 174 aaKnown RBP12.54□□□□□ -0.4
VAPB-204ENST00000475243 RRP9O43818 475 aaKnown RBP12.54□□□□□ -0.4
VAPB-204ENST00000475243 CCDC175P0C221 793 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 NBPF7P0C2Y1 421 aaPredicted RBP12.54□□□□□ -0.4
VAPB-204ENST00000475243 GSTO1P78417 241 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 ATP2B3Q16720 1220 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 AKNAD1Q5T1N1 836 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 TBC1D5Q92609 795 aa12.54□□□□□ -0.4
VAPB-204ENST00000475243 PAIP2Q9BPZ3 127 aaKnown RBP12.54□□□□□ -0.4
VAPB-204ENST00000475243 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
VAPB-204ENST00000475243 CGNQ9P2M7 1197 aaKnown RBP12.53□□□□□ -0.4
VAPB-204ENST00000475243 GRM8O00222 908 aa12.53□□□□□ -0.4
VAPB-204ENST00000475243 RBM25P49756 843 aaKnown RBP12.53□□□□□ -0.4
VAPB-204ENST00000475243 SMC1AQ14683 1233 aaKnown RBP12.53□□□□□ -0.4
VAPB-204ENST00000475243 SLC9C2Q5TAH2 1124 aa12.53□□□□□ -0.4
VAPB-204ENST00000475243 NAA16Q6N069 864 aaPredicted RBP12.53□□□□□ -0.4
VAPB-204ENST00000475243 TMEM110-MUSTN1A8MSY1 372 aa12.53□□□□□ -0.4
VAPB-204ENST00000475243 UQCRFS1P1P0C7P4 283 aa12.53□□□□□ -0.4
VAPB-204ENST00000475243 LMBR1LQ6UX01 489 aa12.53□□□□□ -0.4
VAPB-204ENST00000475243 HELBQ8NG08 1087 aaPredicted RBP12.53□□□□□ -0.4
VAPB-204ENST00000475243 KRT23Q9C075 422 aa12.53□□□□□ -0.4
VAPB-204ENST00000475243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.53□□□□□ -0.4
VAPB-204ENST00000475243 ZSCAN22P10073 491 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms