RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 ABCC4O15439 1325 aa16.47■□□□□ 0.23
TRIM13-207ENST00000474805 SHTN1A0MZ66 631 aa16.47■□□□□ 0.23
TRIM13-207ENST00000474805 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
TRIM13-207ENST00000474805 USP48Q86UV5 1035 aa16.47■□□□□ 0.23
TRIM13-207ENST00000474805 ZC3H15Q8WU90 426 aaKnown RBP16.47■□□□□ 0.23
TRIM13-207ENST00000474805 RTFDC1Q9BY42 306 aaPredicted RBP16.47■□□□□ 0.23
TRIM13-207ENST00000474805 CNOT7Q9UIV1 285 aaKnown RBP16.47■□□□□ 0.23
TRIM13-207ENST00000474805 PPP2R1AP30153 589 aa16.46■□□□□ 0.23
TRIM13-207ENST00000474805 HUNKP57058 714 aa16.46■□□□□ 0.23
TRIM13-207ENST00000474805 NOGQ13253 232 aa16.46■□□□□ 0.23
TRIM13-207ENST00000474805 TNIP1Q15025 636 aa16.46■□□□□ 0.23
TRIM13-207ENST00000474805 SLC10A5Q5PT55 438 aa16.46■□□□□ 0.23
TRIM13-207ENST00000474805 SP8Q8IXZ3 490 aa16.46■□□□□ 0.23
TRIM13-207ENST00000474805 MPNDQ8N594 471 aa16.46■□□□□ 0.23
TRIM13-207ENST00000474805 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.23
TRIM13-207ENST00000474805 ANKRD36CQ5JPF3 1778 aa16.46■□□□□ 0.22
TRIM13-207ENST00000474805 AKAP11Q9UKA4 1901 aa16.45■□□□□ 0.22
TRIM13-207ENST00000474805 KIAA2012Q0VF49 1180 aa16.45■□□□□ 0.22
TRIM13-207ENST00000474805 PARP10Q53GL7 1025 aa16.45■□□□□ 0.22
TRIM13-207ENST00000474805 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
TRIM13-207ENST00000474805 UTP14AQ9BVJ6 771 aaKnown RBP16.45■□□□□ 0.22
TRIM13-207ENST00000474805 CDHR2Q9BYE9 1310 aa16.45■□□□□ 0.22
TRIM13-207ENST00000474805 YDJCA8MPS7 323 aa16.44■□□□□ 0.22
TRIM13-207ENST00000474805 BBOX1O75936 387 aa16.44■□□□□ 0.22
TRIM13-207ENST00000474805 H7C1D1 291 aa16.43■□□□□ 0.22
TRIM13-207ENST00000474805 MICALL2Q8IY33 904 aa16.43■□□□□ 0.22
TRIM13-207ENST00000474805 ZBTB12Q9Y330 459 aaPredicted RBP16.43■□□□□ 0.22
TRIM13-207ENST00000474805 HCLS1P14317 486 aaPredicted RBP16.42■□□□□ 0.22
TRIM13-207ENST00000474805 SOX10P56693 466 aa16.42■□□□□ 0.22
TRIM13-207ENST00000474805 RGMBQ6NW40 437 aa16.42■□□□□ 0.22
TRIM13-207ENST00000474805 SAMD7Q7Z3H4 446 aa16.42■□□□□ 0.22
TRIM13-207ENST00000474805 FAM155AB1AL88 458 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-207ENST00000474805 KIF23Q02241 960 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-207ENST00000474805 LRP10Q7Z4F1 713 aa16.41■□□□□ 0.22
TRIM13-207ENST00000474805 TRPA1O75762 1119 aa16.4■□□□□ 0.22
TRIM13-207ENST00000474805 ANXA1P04083 346 aa16.4■□□□□ 0.22
TRIM13-207ENST00000474805 NEFMP07197 916 aa16.4■□□□□ 0.22
TRIM13-207ENST00000474805 EIF2S2P20042 333 aaKnown RBP16.4■□□□□ 0.22
TRIM13-207ENST00000474805 PDIA6Q15084 440 aa16.4■□□□□ 0.22
TRIM13-207ENST00000474805 TBC1D10BQ4KMP7 808 aaPredicted RBP16.4■□□□□ 0.22
TRIM13-207ENST00000474805 DDX46Q7L014 1031 aaKnown RBP16.4■□□□□ 0.22
TRIM13-207ENST00000474805 ERBB4Q15303 1308 aa16.4■□□□□ 0.22
TRIM13-207ENST00000474805 DUOX1Q9NRD9 1551 aa16.39■□□□□ 0.21
TRIM13-207ENST00000474805 EGFRP00533 1210 aa16.39■□□□□ 0.21
TRIM13-207ENST00000474805 GRAPQ13588 217 aa16.39■□□□□ 0.21
TRIM13-207ENST00000474805 PROSER3Q2NL68 480 aa16.39■□□□□ 0.21
TRIM13-207ENST00000474805 RBM26Q5T8P6 1007 aaKnown RBP16.39■□□□□ 0.21
TRIM13-207ENST00000474805 KRT26Q7Z3Y9 468 aa16.39■□□□□ 0.21
TRIM13-207ENST00000474805 C2orf69Q8N8R5 385 aa16.39■□□□□ 0.21
TRIM13-207ENST00000474805 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
TRIM13-207ENST00000474805 GBA2Q9HCG7 927 aaPredicted RBP16.39■□□□□ 0.21
TRIM13-207ENST00000474805 RNF186Q9NXI6 227 aa16.39■□□□□ 0.21
TRIM13-207ENST00000474805 ADM5C9JUS6 153 aa16.38■□□□□ 0.21
TRIM13-207ENST00000474805 PSMD14O00487 310 aa16.38■□□□□ 0.21
TRIM13-207ENST00000474805 ZNF157P51786 506 aaPredicted RBP16.38■□□□□ 0.21
TRIM13-207ENST00000474805 NLRP10Q86W26 655 aa16.38■□□□□ 0.21
TRIM13-207ENST00000474805 DPF2Q92785 391 aa16.38■□□□□ 0.21
TRIM13-207ENST00000474805 CCDC102AQ96A19 550 aa16.38■□□□□ 0.21
TRIM13-207ENST00000474805 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
TRIM13-207ENST00000474805 DBNDD1Q9H9R9 158 aa16.38■□□□□ 0.21
TRIM13-207ENST00000474805 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
TRIM13-207ENST00000474805 RIMBP2O15034 1052 aa16.37■□□□□ 0.21
TRIM13-207ENST00000474805 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
TRIM13-207ENST00000474805 NFE2L2Q16236 605 aa16.37■□□□□ 0.21
TRIM13-207ENST00000474805 WASHC4Q2M389 1173 aa16.37■□□□□ 0.21
TRIM13-207ENST00000474805 PLEKHF1Q96S99 279 aa16.37■□□□□ 0.21
TRIM13-207ENST00000474805 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
TRIM13-207ENST00000474805 LRRC37AA6NMS7 1700 aa16.36■□□□□ 0.21
TRIM13-207ENST00000474805 COPS6Q7L5N1 327 aa16.36■□□□□ 0.21
TRIM13-207ENST00000474805 DCPSQ96C86 337 aaKnown RBP16.36■□□□□ 0.21
TRIM13-207ENST00000474805 KCNQ5Q9NR82 932 aa16.36■□□□□ 0.21
TRIM13-207ENST00000474805 TSPYL4Q9UJ04 414 aa16.36■□□□□ 0.21
TRIM13-207ENST00000474805 HSP90AB3PQ58FF7 597 aa16.35■□□□□ 0.21
TRIM13-207ENST00000474805 NECTIN2Q92692 538 aa16.35■□□□□ 0.21
TRIM13-207ENST00000474805 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
TRIM13-207ENST00000474805 NSFL1CQ9UNZ2 370 aaKnown RBP16.35■□□□□ 0.21
TRIM13-207ENST00000474805 DDX60Q8IY21 1712 aaKnown RBP16.35■□□□□ 0.21
TRIM13-207ENST00000474805 SH3TC1Q8TE82 1336 aa16.35■□□□□ 0.21
TRIM13-207ENST00000474805 TCIRG1Q13488 830 aa16.34■□□□□ 0.21
TRIM13-207ENST00000474805 DOK7Q18PE1 504 aa16.34■□□□□ 0.21
TRIM13-207ENST00000474805 TMC4Q7Z404 712 aa16.34■□□□□ 0.21
TRIM13-207ENST00000474805 XAGE3Q8WTP9 111 aa16.34■□□□□ 0.21
TRIM13-207ENST00000474805 C6orf229H3BNL8 230 aa16.33■□□□□ 0.2
TRIM13-207ENST00000474805 SLC10A3P09131 477 aa16.33■□□□□ 0.2
TRIM13-207ENST00000474805 CTU1Q7Z7A3 348 aaKnown RBP16.33■□□□□ 0.2
TRIM13-207ENST00000474805 CELF1Q92879 486 aaKnown RBP16.33■□□□□ 0.2
TRIM13-207ENST00000474805 POLLQ9UGP5 575 aa16.33■□□□□ 0.2
TRIM13-207ENST00000474805 SCN9AQ15858 1988 aa16.33■□□□□ 0.2
TRIM13-207ENST00000474805 ECE2O60344 883 aa16.32■□□□□ 0.2
TRIM13-207ENST00000474805 ASTN2O75129 1339 aaPredicted RBP16.32■□□□□ 0.2
TRIM13-207ENST00000474805 COL4A1P02462 1669 aa16.32■□□□□ 0.2
TRIM13-207ENST00000474805 RPS12P25398 132 aaKnown RBP16.32■□□□□ 0.2
TRIM13-207ENST00000474805 GPSM2P81274 684 aa16.32■□□□□ 0.2
TRIM13-207ENST00000474805 RTL9Q8NET4 1388 aa16.32■□□□□ 0.2
TRIM13-207ENST00000474805 KIF4BQ2VIQ3 1234 aa16.31■□□□□ 0.2
TRIM13-207ENST00000474805 PRPF38BQ5VTL8 546 aaKnown RBP16.31■□□□□ 0.2
TRIM13-207ENST00000474805 SULF1Q8IWU6 871 aa16.31■□□□□ 0.2
TRIM13-207ENST00000474805 CDCA5Q96FF9 252 aa16.31■□□□□ 0.2
TRIM13-207ENST00000474805 GGA3Q9NZ52 723 aa16.31■□□□□ 0.2
TRIM13-207ENST00000474805 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms