RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 MYL6BP14649 208 aa17.65■□□□□ 0.42
RTN4R-206ENST00000474642 MPNDQ8N594 471 aa17.65■□□□□ 0.42
RTN4R-206ENST00000474642 CCDC102AQ96A19 550 aa17.65■□□□□ 0.42
RTN4R-206ENST00000474642 HTATSF1O43719 755 aaKnown RBP17.64■□□□□ 0.41
RTN4R-206ENST00000474642 KIF23Q02241 960 aaPredicted RBP17.64■□□□□ 0.41
RTN4R-206ENST00000474642 KIAA2012Q0VF49 1180 aa17.64■□□□□ 0.41
RTN4R-206ENST00000474642 ZNF34Q8IZ26 560 aa17.64■□□□□ 0.41
RTN4R-206ENST00000474642 C2orf69Q8N8R5 385 aa17.64■□□□□ 0.41
RTN4R-206ENST00000474642 GBA2Q9HCG7 927 aaPredicted RBP17.64■□□□□ 0.41
RTN4R-206ENST00000474642 AKAP11Q9UKA4 1901 aa17.63■□□□□ 0.41
RTN4R-206ENST00000474642 SHTN1A0MZ66 631 aa17.63■□□□□ 0.41
RTN4R-206ENST00000474642 FAM155AB1AL88 458 aaPredicted RBP17.63■□□□□ 0.41
RTN4R-206ENST00000474642 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
RTN4R-206ENST00000474642 ZNF157P51786 506 aaPredicted RBP17.63■□□□□ 0.41
RTN4R-206ENST00000474642 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.41
RTN4R-206ENST00000474642 DLK2Q6UY11 383 aa17.63■□□□□ 0.41
RTN4R-206ENST00000474642 KRT26Q7Z3Y9 468 aa17.63■□□□□ 0.41
RTN4R-206ENST00000474642 SP8Q8IXZ3 490 aa17.63■□□□□ 0.41
RTN4R-206ENST00000474642 MICALL2Q8IY33 904 aa17.63■□□□□ 0.41
RTN4R-206ENST00000474642 RNF186Q9NXI6 227 aa17.63■□□□□ 0.41
RTN4R-206ENST00000474642 ABCC4O15439 1325 aa17.63■□□□□ 0.41
RTN4R-206ENST00000474642 LAMB4A4D0S4 1761 aa17.62■□□□□ 0.41
RTN4R-206ENST00000474642 BBOX1O75936 387 aa17.62■□□□□ 0.41
RTN4R-206ENST00000474642 PARP10Q53GL7 1025 aa17.62■□□□□ 0.41
RTN4R-206ENST00000474642 GIGYF2Q6Y7W6 1299 aaKnown RBP17.62■□□□□ 0.41
RTN4R-206ENST00000474642 POLR2AP24928 1970 aaKnown RBP17.62■□□□□ 0.41
RTN4R-206ENST00000474642 CTU1Q7Z7A3 348 aaKnown RBP17.61■□□□□ 0.41
RTN4R-206ENST00000474642 UTP14AQ9BVJ6 771 aaKnown RBP17.61■□□□□ 0.41
RTN4R-206ENST00000474642 SAMD7Q7Z3H4 446 aa17.6■□□□□ 0.41
RTN4R-206ENST00000474642 PNISRQ8TF01 805 aaKnown RBP17.6■□□□□ 0.41
RTN4R-206ENST00000474642 DCPSQ96C86 337 aaKnown RBP17.6■□□□□ 0.41
RTN4R-206ENST00000474642 ZBTB12Q9Y330 459 aaPredicted RBP17.6■□□□□ 0.41
RTN4R-206ENST00000474642 YDJCA8MPS7 323 aa17.59■□□□□ 0.41
RTN4R-206ENST00000474642 TBC1D10BQ4KMP7 808 aaPredicted RBP17.59■□□□□ 0.41
RTN4R-206ENST00000474642 SLC10A5Q5PT55 438 aa17.59■□□□□ 0.41
RTN4R-206ENST00000474642 DPF2Q92785 391 aa17.59■□□□□ 0.41
RTN4R-206ENST00000474642 RBM26Q5T8P6 1007 aaKnown RBP17.58■□□□□ 0.4
RTN4R-206ENST00000474642 DDX46Q7L014 1031 aaKnown RBP17.58■□□□□ 0.4
RTN4R-206ENST00000474642 ADM5C9JUS6 153 aa17.57■□□□□ 0.4
RTN4R-206ENST00000474642 PSMD14O00487 310 aa17.57■□□□□ 0.4
RTN4R-206ENST00000474642 EIF4A1P60842 406 aaKnown RBP17.57■□□□□ 0.4
RTN4R-206ENST00000474642 CSRNP1Q96S65 589 aa17.57■□□□□ 0.4
RTN4R-206ENST00000474642 HPS5Q9UPZ3 1129 aa17.57■□□□□ 0.4
RTN4R-206ENST00000474642 SLC10A3P09131 477 aa17.56■□□□□ 0.4
RTN4R-206ENST00000474642 HCLS1P14317 486 aaPredicted RBP17.55■□□□□ 0.4
RTN4R-206ENST00000474642 GRAPQ13588 217 aa17.55■□□□□ 0.4
RTN4R-206ENST00000474642 REM2Q8IYK8 340 aaPredicted RBP17.55■□□□□ 0.4
RTN4R-206ENST00000474642 GRAPLQ8TC17 118 aaPredicted RBP17.55■□□□□ 0.4
RTN4R-206ENST00000474642 HDAC9Q9UKV0 1011 aa17.55■□□□□ 0.4
RTN4R-206ENST00000474642 EGFRP00533 1210 aa17.54■□□□□ 0.4
RTN4R-206ENST00000474642 NEFMP07197 916 aa17.54■□□□□ 0.4
RTN4R-206ENST00000474642 PKN2Q16513 984 aaKnown RBP17.54■□□□□ 0.4
RTN4R-206ENST00000474642 WASHC4Q2M389 1173 aa17.54■□□□□ 0.4
RTN4R-206ENST00000474642 SULF1Q8IWU6 871 aa17.54■□□□□ 0.4
RTN4R-206ENST00000474642 DBNDD1Q9H9R9 158 aa17.54■□□□□ 0.4
RTN4R-206ENST00000474642 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
RTN4R-206ENST00000474642 RPS12P25398 132 aaKnown RBP17.53■□□□□ 0.4
RTN4R-206ENST00000474642 TMC4Q7Z404 712 aa17.53■□□□□ 0.4
RTN4R-206ENST00000474642 GCC1Q96CN9 775 aa17.53■□□□□ 0.4
RTN4R-206ENST00000474642 THUMPD2Q9BTF0 503 aaKnown RBP17.53■□□□□ 0.4
RTN4R-206ENST00000474642 KIF4BQ2VIQ3 1234 aa17.52■□□□□ 0.4
RTN4R-206ENST00000474642 KDM3BQ7LBC6 1761 aa17.52■□□□□ 0.4
RTN4R-206ENST00000474642 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
RTN4R-206ENST00000474642 RIMBP2O15034 1052 aa17.51■□□□□ 0.39
RTN4R-206ENST00000474642 GGA3Q9NZ52 723 aa17.51■□□□□ 0.39
RTN4R-206ENST00000474642 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
RTN4R-206ENST00000474642 NSFL1CQ9UNZ2 370 aaKnown RBP17.51■□□□□ 0.39
RTN4R-206ENST00000474642 LAMB2P55268 1798 aa17.51■□□□□ 0.39
RTN4R-206ENST00000474642 C6orf229H3BNL8 230 aa17.5■□□□□ 0.39
RTN4R-206ENST00000474642 EIF2S2P20042 333 aaKnown RBP17.5■□□□□ 0.39
RTN4R-206ENST00000474642 HSP90AB3PQ58FF7 597 aa17.5■□□□□ 0.39
RTN4R-206ENST00000474642 NLRP10Q86W26 655 aa17.5■□□□□ 0.39
RTN4R-206ENST00000474642 RASAL3Q86YV0 1011 aa17.5■□□□□ 0.39
RTN4R-206ENST00000474642 CDCA5Q96FF9 252 aa17.5■□□□□ 0.39
RTN4R-206ENST00000474642 TAF1P21675 1872 aa17.5■□□□□ 0.39
RTN4R-206ENST00000474642 ECE2O60344 883 aa17.49■□□□□ 0.39
RTN4R-206ENST00000474642 DOK7Q18PE1 504 aa17.49■□□□□ 0.39
RTN4R-206ENST00000474642 ZNF296Q8WUU4 475 aaPredicted RBP17.49■□□□□ 0.39
RTN4R-206ENST00000474642 KCNQ5Q9NR82 932 aa17.49■□□□□ 0.39
RTN4R-206ENST00000474642 DUOX1Q9NRD9 1551 aa17.49■□□□□ 0.39
RTN4R-206ENST00000474642 SH3TC1Q8TE82 1336 aa17.48■□□□□ 0.39
RTN4R-206ENST00000474642 TBC1D8O95759 1140 aa17.48■□□□□ 0.39
RTN4R-206ENST00000474642 EYA3Q99504 573 aa17.48■□□□□ 0.39
RTN4R-206ENST00000474642 DLG5Q8TDM6 1919 aa17.47■□□□□ 0.39
RTN4R-206ENST00000474642 ANXA1P04083 346 aa17.47■□□□□ 0.39
RTN4R-206ENST00000474642 PPP2R1AP30153 589 aa17.47■□□□□ 0.39
RTN4R-206ENST00000474642 AIMP1Q12904 312 aaKnown RBP17.47■□□□□ 0.39
RTN4R-206ENST00000474642 PDIA6Q15084 440 aa17.47■□□□□ 0.39
RTN4R-206ENST00000474642 LRP10Q7Z4F1 713 aa17.47■□□□□ 0.39
RTN4R-206ENST00000474642 POLLQ9UGP5 575 aa17.47■□□□□ 0.39
RTN4R-206ENST00000474642 ASTN2O75129 1339 aaPredicted RBP17.47■□□□□ 0.39
RTN4R-206ENST00000474642 RTL9Q8NET4 1388 aa17.46■□□□□ 0.39
RTN4R-206ENST00000474642 G3V3G9 751 aa17.46■□□□□ 0.39
RTN4R-206ENST00000474642 FKBP1BP68106 108 aa17.46■□□□□ 0.39
RTN4R-206ENST00000474642 PROSER3Q2NL68 480 aa17.46■□□□□ 0.39
RTN4R-206ENST00000474642 DCAF8Q5TAQ9 597 aa17.46■□□□□ 0.39
RTN4R-206ENST00000474642 VIL1P09327 827 aaKnown RBP17.45■□□□□ 0.38
RTN4R-206ENST00000474642 GPSM2P81274 684 aa17.45■□□□□ 0.38
RTN4R-206ENST00000474642 TCIRG1Q13488 830 aa17.45■□□□□ 0.38
RTN4R-206ENST00000474642 ANGEL2Q5VTE6 544 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms