RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
RPGR-206ENST00000474584 MYL6BP14649 208 aa16.68■□□□□ 0.26
RPGR-206ENST00000474584 TYRO3Q06418 890 aa16.68■□□□□ 0.26
RPGR-206ENST00000474584 TRPM3Q9HCF6 1732 aaPredicted RBP16.68■□□□□ 0.26
RPGR-206ENST00000474584 RFX7Q2KHR2 1363 aa16.68■□□□□ 0.26
RPGR-206ENST00000474584 AP5Z1O43299 807 aa16.67■□□□□ 0.26
RPGR-206ENST00000474584 LIG1P18858 919 aa16.67■□□□□ 0.26
RPGR-206ENST00000474584 COL9A3Q14050 684 aaPredicted RBP16.67■□□□□ 0.26
RPGR-206ENST00000474584 FAM173BQ6P4H8 233 aa16.67■□□□□ 0.26
RPGR-206ENST00000474584 C17orf53Q8N3J3 647 aaPredicted RBP16.67■□□□□ 0.26
RPGR-206ENST00000474584 DDX19AQ9NUU7 478 aaKnown RBP16.67■□□□□ 0.26
RPGR-206ENST00000474584 TAF5LO75529 589 aa16.67■□□□□ 0.26
RPGR-206ENST00000474584 ATP5JP18859 108 aa16.67■□□□□ 0.26
RPGR-206ENST00000474584 STK3Q13188 491 aa16.67■□□□□ 0.26
RPGR-206ENST00000474584 CAMK4Q16566 473 aa16.67■□□□□ 0.26
RPGR-206ENST00000474584 USPL1Q5W0Q7 1092 aa16.67■□□□□ 0.26
RPGR-206ENST00000474584 MYD88Q99836 296 aa16.67■□□□□ 0.26
RPGR-206ENST00000474584 METTL22Q9BUU2 404 aaPredicted RBP16.67■□□□□ 0.26
RPGR-206ENST00000474584 COPRSQ9NQ92 184 aa16.67■□□□□ 0.26
RPGR-206ENST00000474584 TAF6LQ9Y6J9 622 aa16.67■□□□□ 0.26
RPGR-206ENST00000474584 XAGE3Q8WTP9 111 aa16.66■□□□□ 0.26
RPGR-206ENST00000474584 ZMYND15Q9H091 742 aa16.66■□□□□ 0.26
RPGR-206ENST00000474584 DACT1Q9NYF0 836 aa16.66■□□□□ 0.26
RPGR-206ENST00000474584 MRVI1Q9Y6F6 885 aa16.66■□□□□ 0.26
RPGR-206ENST00000474584 GTF2F1P35269 517 aaKnown RBP eCLIP16.66■□□□□ 0.26
RPGR-206ENST00000474584 SPC24Q8NBT2 197 aa16.66■□□□□ 0.26
RPGR-206ENST00000474584 KIAA1524Q8TCG1 905 aa16.66■□□□□ 0.26
RPGR-206ENST00000474584 GTF3C6Q969F1 213 aa16.66■□□□□ 0.26
RPGR-206ENST00000474584 ORAI2Q96SN7 254 aa16.66■□□□□ 0.26
RPGR-206ENST00000474584 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
RPGR-206ENST00000474584 AXIN2Q9Y2T1 843 aa16.66■□□□□ 0.26
RPGR-206ENST00000474584 ERBB3P21860 1342 aa16.65■□□□□ 0.26
RPGR-206ENST00000474584 MYH15Q9Y2K3 1946 aa16.65■□□□□ 0.26
RPGR-206ENST00000474584 CHAF1AQ13111 956 aaPredicted RBP16.65■□□□□ 0.26
RPGR-206ENST00000474584 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
RPGR-206ENST00000474584 COPS6Q7L5N1 327 aa16.65■□□□□ 0.26
RPGR-206ENST00000474584 LEO1Q8WVC0 666 aaPredicted RBP16.65■□□□□ 0.26
RPGR-206ENST00000474584 RAPGEF4Q8WZA2 1011 aa16.65■□□□□ 0.26
RPGR-206ENST00000474584 NEK1Q96PY6 1258 aa16.65■□□□□ 0.26
RPGR-206ENST00000474584 ARFGEF2Q9Y6D5 1785 aa16.65■□□□□ 0.26
RPGR-206ENST00000474584 TNNI3KQ59H18 835 aa16.65■□□□□ 0.26
RPGR-206ENST00000474584 EPHA10Q5JZY3 1008 aa16.65■□□□□ 0.26
RPGR-206ENST00000474584 KCNF1Q9H3M0 494 aa16.65■□□□□ 0.26
RPGR-206ENST00000474584 DBNLQ9UJU6 430 aaKnown RBP16.65■□□□□ 0.26
RPGR-206ENST00000474584 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
RPGR-206ENST00000474584 FPGT-TNNI3KV9GXZ4 949 aa16.65■□□□□ 0.26
RPGR-206ENST00000474584 EDC3Q96F86 508 aaKnown RBP16.64■□□□□ 0.25
RPGR-206ENST00000474584 TFIP11Q9UBB9 837 aaKnown RBP16.64■□□□□ 0.25
RPGR-206ENST00000474584 KDM6AO15550 1401 aaPredicted RBP16.64■□□□□ 0.25
RPGR-206ENST00000474584 KIF1AQ12756 1690 aa16.64■□□□□ 0.25
RPGR-206ENST00000474584 HSP90B1P14625 803 aaKnown RBP16.63■□□□□ 0.25
RPGR-206ENST00000474584 ANO6Q4KMQ2 910 aa16.63■□□□□ 0.25
RPGR-206ENST00000474584 ANKRD13DQ6ZTN6 518 aa16.63■□□□□ 0.25
RPGR-206ENST00000474584 LUZP1Q86V48 1076 aa16.63■□□□□ 0.25
RPGR-206ENST00000474584 CKAP2LQ8IYA6 745 aa16.63■□□□□ 0.25
RPGR-206ENST00000474584 BICD2Q8TD16 824 aa16.63■□□□□ 0.25
RPGR-206ENST00000474584 CLSTN2Q9H4D0 955 aa16.63■□□□□ 0.25
RPGR-206ENST00000474584 LAMA4Q16363 1823 aa16.63■□□□□ 0.25
RPGR-206ENST00000474584 H3BQV1 296 aa16.63■□□□□ 0.25
RPGR-206ENST00000474584 IFFO2Q5TF58 517 aa16.63■□□□□ 0.25
RPGR-206ENST00000474584 RBM43Q6ZSC3 357 aaKnown RBP16.63■□□□□ 0.25
RPGR-206ENST00000474584 KIF3AQ9Y496 699 aa16.63■□□□□ 0.25
RPGR-206ENST00000474584 ZNF609O15014 1411 aa16.62■□□□□ 0.25
RPGR-206ENST00000474584 TFCP2Q12800 502 aa16.62■□□□□ 0.25
RPGR-206ENST00000474584 PYCARDQ9ULZ3 195 aa16.62■□□□□ 0.25
RPGR-206ENST00000474584 COL15A1P39059 1388 aa16.62■□□□□ 0.25
RPGR-206ENST00000474584 PTPN12Q05209 780 aaKnown RBP16.62■□□□□ 0.25
RPGR-206ENST00000474584 Q6ZUG5 572 aa16.62■□□□□ 0.25
RPGR-206ENST00000474584 BRF1Q92994 677 aa16.62■□□□□ 0.25
RPGR-206ENST00000474584 DNAJC2Q99543 621 aaKnown RBP16.62■□□□□ 0.25
RPGR-206ENST00000474584 ZSCAN16Q9H4T2 348 aaPredicted RBP16.62■□□□□ 0.25
RPGR-206ENST00000474584 CFAP45Q9UL16 551 aa16.62■□□□□ 0.25
RPGR-206ENST00000474584 JAK2O60674 1132 aa16.61■□□□□ 0.25
RPGR-206ENST00000474584 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
RPGR-206ENST00000474584 MCMDC2Q4G0Z9 681 aa16.61■□□□□ 0.25
RPGR-206ENST00000474584 UBE3BQ7Z3V4 1068 aa16.61■□□□□ 0.25
RPGR-206ENST00000474584 NFATC2IPQ8NCF5 419 aa16.61■□□□□ 0.25
RPGR-206ENST00000474584 CBX8Q9HC52 389 aa16.61■□□□□ 0.25
RPGR-206ENST00000474584 TATP17735 454 aaPredicted RBP16.61■□□□□ 0.25
RPGR-206ENST00000474584 FGD1P98174 961 aa16.61■□□□□ 0.25
RPGR-206ENST00000474584 RABL6Q3YEC7 729 aaPredicted RBP16.61■□□□□ 0.25
RPGR-206ENST00000474584 TTC5Q8N0Z6 440 aa16.61■□□□□ 0.25
RPGR-206ENST00000474584 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
RPGR-206ENST00000474584 HAUS7Q99871 368 aa16.61■□□□□ 0.25
RPGR-206ENST00000474584 NR1I2O75469 434 aa16.6■□□□□ 0.25
RPGR-206ENST00000474584 CAVIN2O95810 425 aa16.6■□□□□ 0.25
RPGR-206ENST00000474584 HMGB1P09429 215 aaKnown RBP16.6■□□□□ 0.25
RPGR-206ENST00000474584 SNRPA1P09661 255 aaKnown RBP16.6■□□□□ 0.25
RPGR-206ENST00000474584 PHKG2P15735 406 aa16.6■□□□□ 0.25
RPGR-206ENST00000474584 RESTQ13127 1097 aa16.6■□□□□ 0.25
RPGR-206ENST00000474584 CYP21A2P08686 494 aa16.59■□□□□ 0.25
RPGR-206ENST00000474584 PTGS1P23219 599 aa16.59■□□□□ 0.25
RPGR-206ENST00000474584 KRT28Q7Z3Y7 464 aa16.59■□□□□ 0.25
RPGR-206ENST00000474584 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.59■□□□□ 0.25
RPGR-206ENST00000474584 DRC7Q8IY82 874 aa16.59■□□□□ 0.25
RPGR-206ENST00000474584 NLRP2Q9NX02 1062 aa16.59■□□□□ 0.25
RPGR-206ENST00000474584 LAMB4A4D0S4 1761 aa16.59■□□□□ 0.25
RPGR-206ENST00000474584 CCDC129Q6ZRS4 1044 aa16.59■□□□□ 0.25
RPGR-206ENST00000474584 TDRD7Q8NHU6 1098 aaKnown RBP16.59■□□□□ 0.25
RPGR-206ENST00000474584 PGBD1Q96JS3 809 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms