RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 SRSF11Q05519 484 aaKnown RBP7.71□□□□□ -1.18
ATPAF1-204ENST00000474020 NGEFQ8N5V2 710 aa7.71□□□□□ -1.18
ATPAF1-204ENST00000474020 ABCC3O15438 1527 aa7.71□□□□□ -1.18
ATPAF1-204ENST00000474020 GLI2P10070 1586 aa7.71□□□□□ -1.18
ATPAF1-204ENST00000474020 ABCA6Q8N139 1617 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 PIK3C2GO75747 1445 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 NOS1P29475 1434 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 BLMP54132 1417 aaPredicted RBP7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 NPATQ14207 1427 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 ARHGAP31Q2M1Z3 1444 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 GPR25O00155 361 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 CFAP70Q5T0N1 1121 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 ZNF385CQ66K41 422 aaPredicted RBP7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 ADAMTS19Q8TE59 1207 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 GTPBP3Q969Y2 492 aaKnown RBP7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 TRERF1Q96PN7 1200 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 NUCKS1Q9H1E3 243 aaKnown RBP7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 SLC52A1Q9NWF4 448 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 RCAN3Q9UKA8 241 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 NOD1Q9Y239 953 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 PCDHGA11Q9Y5H2 935 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 ADGRF5Q8IZF2 1346 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 CAMSAP1Q5T5Y3 1602 aa7.7□□□□□ -1.18
ATPAF1-204ENST00000474020 TMEM229AB2RXF0 380 aa7.69□□□□□ -1.18
ATPAF1-204ENST00000474020 ADAMTS2O95450 1211 aa7.69□□□□□ -1.18
ATPAF1-204ENST00000474020 PPP2R1AP30153 589 aa7.69□□□□□ -1.18
ATPAF1-204ENST00000474020 NCOA4Q13772 614 aa7.69□□□□□ -1.18
ATPAF1-204ENST00000474020 ERICH6Q7L0X2 663 aa7.69□□□□□ -1.18
ATPAF1-204ENST00000474020 SVOPQ8N4V2 548 aa7.69□□□□□ -1.18
ATPAF1-204ENST00000474020 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.69□□□□□ -1.18
ATPAF1-204ENST00000474020 C14orf93Q9H972 538 aaKnown RBP7.69□□□□□ -1.18
ATPAF1-204ENST00000474020 MBIPQ9NS73 344 aa7.69□□□□□ -1.18
ATPAF1-204ENST00000474020 RNF123Q5XPI4 1314 aa7.69□□□□□ -1.18
ATPAF1-204ENST00000474020 FRMPD1Q5SYB0 1578 aa7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 UGGT1Q9NYU2 1555 aa7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 DIP2CQ9Y2E4 1556 aa7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 MYO3AQ8NEV4 1616 aa7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 USP17L5A8MUK1 530 aa7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 SMTNP53814 917 aa7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 RRP1P56182 461 aaKnown RBP7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 CLUAP1Q96AJ1 413 aa7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 CFAP53Q96M91 514 aa7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 PUS7Q96PZ0 661 aaKnown RBP7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 GPAMQ9HCL2 828 aa7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 RBM19Q9Y4C8 960 aaKnown RBP7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 IFT172Q9UG01 1749 aa7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 EVC2Q86UK5 1308 aa7.68□□□□□ -1.18
ATPAF1-204ENST00000474020 RAPGEF3O95398 923 aa7.67□□□□□ -1.18
ATPAF1-204ENST00000474020 GTF2IP78347 998 aa7.67□□□□□ -1.18
ATPAF1-204ENST00000474020 LBRQ14739 615 aaKnown RBP7.67□□□□□ -1.18
ATPAF1-204ENST00000474020 HDGFL1Q5TGJ6 251 aa7.67□□□□□ -1.18
ATPAF1-204ENST00000474020 B4GALNT3Q6L9W6 998 aa7.67□□□□□ -1.18
ATPAF1-204ENST00000474020 WHAMMQ8TF30 809 aa7.67□□□□□ -1.18
ATPAF1-204ENST00000474020 SLC4A9Q96Q91 983 aa7.67□□□□□ -1.18
ATPAF1-204ENST00000474020 NINLQ9Y2I6 1382 aa7.67□□□□□ -1.18
ATPAF1-204ENST00000474020 ERVK-7P63135 1459 aa7.67□□□□□ -1.18
ATPAF1-204ENST00000474020 MROH2AA6NES4 1674 aa7.67□□□□□ -1.18
ATPAF1-204ENST00000474020 RNF225M0QZC1 329 aaPredicted RBP7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 THBS1P07996 1170 aa7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 MSX1P28360 303 aa7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 MTFR1Q15390 333 aa7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 PROSER2Q86WR7 435 aaPredicted RBP7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 PLEKHM2Q8IWE5 1019 aa7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 DEPDC4Q8N2C3 294 aa7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 FNBP4Q8N3X1 1017 aaPredicted RBP7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 UCN2Q96RP3 112 aa7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 SERTAD1Q9UHV2 236 aa7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 CGNL1Q0VF96 1302 aa7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 NSD2O96028 1365 aa7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 PPLO60437 1756 aa7.66□□□□□ -1.18
ATPAF1-204ENST00000474020 A6NJY4 79 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 ARHGEF15O94989 841 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 ZFYVE9O95405 1425 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 CSB-PGBD3P0DP91 1061 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 PLA2G4AP47712 749 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 MAP3K10Q02779 954 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 FAM69CQ0P6D2 419 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 MORC1Q86VD1 984 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 PGBD3Q8N328 593 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 CFHR5Q9BXR6 569 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 NIFKQ9BYG3 293 aaKnown RBP7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 CRISPLD1Q9H336 500 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 FANCIQ9NVI1 1328 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 NSFL1CQ9UNZ2 370 aaKnown RBP7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 ADAMTS8Q9UP79 889 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 TRAK1Q9UPV9 953 aa7.65□□□□□ -1.18
ATPAF1-204ENST00000474020 RICTORQ6R327 1708 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 CDK2AP1O14519 115 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 BACH1O14867 736 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 ATP9BO43861 1147 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 PSME1Q06323 249 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 KCNMA1Q12791 1236 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 UBAP2LQ14157 1087 aaKnown RBP7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 LYPD4Q6UWN0 246 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 TBC1D9Q6ZT07 1266 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 TRIM50Q86XT4 487 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 ZNF295-AS1Q8N0V1 137 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 RUBCNLQ9H714 662 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 ENAMQ9NRM1 1142 aa7.64□□□□□ -1.19
ATPAF1-204ENST00000474020 IQSEC3Q9UPP2 1182 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms