RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 NDFIP2Q9NV92 336 aa6.77□□□□□ -1.33
BRCA1-212ENST00000473961 FAM13BQ9NYF5 915 aa6.77□□□□□ -1.33
BRCA1-212ENST00000473961 CABP1Q9NZU7 370 aa6.77□□□□□ -1.33
BRCA1-212ENST00000473961 IL2RAP01589 272 aa6.76□□□□□ -1.33
BRCA1-212ENST00000473961 TXKP42681 527 aa6.76□□□□□ -1.33
BRCA1-212ENST00000473961 TEAD4Q15561 434 aa6.76□□□□□ -1.33
BRCA1-212ENST00000473961 RTN1Q16799 776 aa6.76□□□□□ -1.33
BRCA1-212ENST00000473961 TMC7Q7Z402 723 aa6.76□□□□□ -1.33
BRCA1-212ENST00000473961 FMNL2Q96PY5 1086 aa6.76□□□□□ -1.33
BRCA1-212ENST00000473961 NIFKQ9BYG3 293 aaKnown RBP6.76□□□□□ -1.33
BRCA1-212ENST00000473961 KIAA1522Q9P206 1035 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-212ENST00000473961 TREHO43280 583 aa6.75□□□□□ -1.33
BRCA1-212ENST00000473961 PAX4O43316 350 aa6.75□□□□□ -1.33
BRCA1-212ENST00000473961 NOS2P35228 1153 aa6.75□□□□□ -1.33
BRCA1-212ENST00000473961 LBRQ14739 615 aaKnown RBP6.75□□□□□ -1.33
BRCA1-212ENST00000473961 TBCELQ5QJ74 424 aa6.75□□□□□ -1.33
BRCA1-212ENST00000473961 COX20Q5RI15 118 aa6.75□□□□□ -1.33
BRCA1-212ENST00000473961 TMEM214Q6NUQ4 689 aaKnown RBP6.75□□□□□ -1.33
BRCA1-212ENST00000473961 POTEAQ6S8J7 498 aa6.75□□□□□ -1.33
BRCA1-212ENST00000473961 NGLY1Q96IV0 654 aa6.75□□□□□ -1.33
BRCA1-212ENST00000473961 ZSCAN10Q96SZ4 725 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-212ENST00000473961 QTRT2Q9H974 415 aaKnown RBP6.75□□□□□ -1.33
BRCA1-212ENST00000473961 RPLP1P05386 114 aaKnown RBP6.74□□□□□ -1.33
BRCA1-212ENST00000473961 NEFLP07196 543 aa6.74□□□□□ -1.33
BRCA1-212ENST00000473961 XPCQ01831 940 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-212ENST00000473961 PLCB3Q01970 1234 aa6.74□□□□□ -1.33
BRCA1-212ENST00000473961 CENPCQ03188 943 aa6.74□□□□□ -1.33
BRCA1-212ENST00000473961 C11orf91Q3C1V1 193 aa6.74□□□□□ -1.33
BRCA1-212ENST00000473961 GNASQ5JWF2 1037 aa6.74□□□□□ -1.33
BRCA1-212ENST00000473961 SAP130Q9H0E3 1048 aa6.74□□□□□ -1.33
BRCA1-212ENST00000473961 MRS2Q9HD23 443 aa6.74□□□□□ -1.33
BRCA1-212ENST00000473961 IGSF5Q9NSI5 407 aa6.74□□□□□ -1.33
BRCA1-212ENST00000473961 IQSEC3Q9UPP2 1182 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-212ENST00000473961 COL17A1Q9UMD9 1497 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-212ENST00000473961 EML1O00423 815 aa6.73□□□□□ -1.33
BRCA1-212ENST00000473961 BNIP3LO60238 219 aa6.73□□□□□ -1.33
BRCA1-212ENST00000473961 FMR1Q06787 632 aaKnown RBP eCLIP6.73□□□□□ -1.33
BRCA1-212ENST00000473961 EHHADHQ08426 723 aa6.73□□□□□ -1.33
BRCA1-212ENST00000473961 C1orf53Q5VUE5 145 aa6.73□□□□□ -1.33
BRCA1-212ENST00000473961 PPARGC1BQ86YN6 1023 aaKnown RBP6.73□□□□□ -1.33
BRCA1-212ENST00000473961 ALDH16A1Q8IZ83 802 aa6.73□□□□□ -1.33
BRCA1-212ENST00000473961 RHBDD1Q8TEB9 315 aa6.73□□□□□ -1.33
BRCA1-212ENST00000473961 L3MBTL2Q969R5 705 aa6.73□□□□□ -1.33
BRCA1-212ENST00000473961 ALKBH8Q96BT7 664 aaKnown RBP6.73□□□□□ -1.33
BRCA1-212ENST00000473961 TNFRSF10BO14763 440 aa6.72□□□□□ -1.33
BRCA1-212ENST00000473961 PRPF40AO75400 957 aaKnown RBP6.72□□□□□ -1.33
BRCA1-212ENST00000473961 APBA3O96018 575 aa6.72□□□□□ -1.33
BRCA1-212ENST00000473961 P4HBP07237 508 aaKnown RBP6.72□□□□□ -1.33
BRCA1-212ENST00000473961 H2AFB1P0C5Y9 115 aa6.72□□□□□ -1.33
BRCA1-212ENST00000473961 H2AFB2P0C5Z0 115 aa6.72□□□□□ -1.33
BRCA1-212ENST00000473961 MZF1P28698 734 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-212ENST00000473961 MAPK8P45983 427 aa6.72□□□□□ -1.33
BRCA1-212ENST00000473961 NBPF1Q3BBV0 1214 aa6.72□□□□□ -1.33
BRCA1-212ENST00000473961 FCHSD1Q86WN1 690 aa6.72□□□□□ -1.33
BRCA1-212ENST00000473961 FAM129BQ96TA1 746 aa6.72□□□□□ -1.33
BRCA1-212ENST00000473961 RUBCNLQ9H714 662 aa6.72□□□□□ -1.33
BRCA1-212ENST00000473961 KLF15Q9UIH9 416 aa6.72□□□□□ -1.33
BRCA1-212ENST00000473961 HRH3Q9Y5N1 445 aa6.72□□□□□ -1.33
BRCA1-212ENST00000473961 GPC6Q9Y625 555 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-212ENST00000473961 A0A1B0GTH6 734 aa6.71□□□□□ -1.34
BRCA1-212ENST00000473961 FZD6O60353 706 aa6.71□□□□□ -1.34
BRCA1-212ENST00000473961 LDHBP07195 334 aaKnown RBP6.71□□□□□ -1.34
BRCA1-212ENST00000473961 FZD5Q13467 585 aa6.71□□□□□ -1.34
BRCA1-212ENST00000473961 DGKZQ13574 1117 aa6.71□□□□□ -1.34
BRCA1-212ENST00000473961 FHDC1Q9C0D6 1143 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-212ENST00000473961 ZAP70P43403 619 aa6.7□□□□□ -1.34
BRCA1-212ENST00000473961 TSNAXIP1Q2TAA8 658 aa6.7□□□□□ -1.34
BRCA1-212ENST00000473961 ALG1LQ6GMV1 187 aa6.7□□□□□ -1.34
BRCA1-212ENST00000473961 IFT43Q96FT9 208 aa6.7□□□□□ -1.34
BRCA1-212ENST00000473961 PHACTR1Q9C0D0 580 aa6.7□□□□□ -1.34
BRCA1-212ENST00000473961 CCDC87Q9NVE4 849 aa6.7□□□□□ -1.34
BRCA1-212ENST00000473961 USP35Q9P2H5 1018 aa6.7□□□□□ -1.34
BRCA1-212ENST00000473961 LRFN2Q9ULH4 789 aa6.7□□□□□ -1.34
BRCA1-212ENST00000473961 TATP17735 454 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-212ENST00000473961 ADH6P28332 368 aa6.69□□□□□ -1.34
BRCA1-212ENST00000473961 PHKA2P46019 1235 aa6.69□□□□□ -1.34
BRCA1-212ENST00000473961 DNM1Q05193 864 aaKnown RBP6.69□□□□□ -1.34
BRCA1-212ENST00000473961 PRRT3Q5FWE3 981 aa6.69□□□□□ -1.34
BRCA1-212ENST00000473961 GJD3Q8N144 294 aa6.69□□□□□ -1.34
BRCA1-212ENST00000473961 C8orf37Q96NL8 207 aa6.69□□□□□ -1.34
BRCA1-212ENST00000473961 ANKIB1Q9P2G1 1089 aa6.69□□□□□ -1.34
BRCA1-212ENST00000473961 HCN4Q9Y3Q4 1203 aa6.69□□□□□ -1.34
BRCA1-212ENST00000473961 SCAMP3O14828 347 aaKnown RBP6.68□□□□□ -1.34
BRCA1-212ENST00000473961 SORBS3O60504 671 aa6.68□□□□□ -1.34
BRCA1-212ENST00000473961 ZC3H6P61129 1189 aaKnown RBP6.68□□□□□ -1.34
BRCA1-212ENST00000473961 DSC3Q14574 896 aa6.68□□□□□ -1.34
BRCA1-212ENST00000473961 PGBD3Q8N328 593 aa6.68□□□□□ -1.34
BRCA1-212ENST00000473961 RHPN1Q8TCX5 695 aa6.68□□□□□ -1.34
BRCA1-212ENST00000473961 FBF1Q8TES7 1133 aa6.68□□□□□ -1.34
BRCA1-212ENST00000473961 ZDHHC1Q8WTX9 485 aa6.68□□□□□ -1.34
BRCA1-212ENST00000473961 PIK3R5Q8WYR1 880 aa6.68□□□□□ -1.34
BRCA1-212ENST00000473961 FRMD6Q96NE9 622 aa6.68□□□□□ -1.34
BRCA1-212ENST00000473961 ZDHHC3Q9NYG2 299 aa6.68□□□□□ -1.34
BRCA1-212ENST00000473961 POLIQ9UNA4 740 aa6.68□□□□□ -1.34
BRCA1-212ENST00000473961 USP3Q9Y6I4 520 aa6.68□□□□□ -1.34
BRCA1-212ENST00000473961 FAM229AH3BQW9 127 aa6.67□□□□□ -1.34
BRCA1-212ENST00000473961 RECKO95980 971 aa6.67□□□□□ -1.34
BRCA1-212ENST00000473961 PDGFAP04085 211 aa6.67□□□□□ -1.34
BRCA1-212ENST00000473961 MSX1P28360 303 aa6.67□□□□□ -1.34
BRCA1-212ENST00000473961 PSMD2Q13200 908 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms