RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 NFAT5O94916 1531 aa6.39□□□□□ -1.39
LMNB1-205ENST00000472034 NDUFV2P19404 249 aa6.38□□□□□ -1.39
LMNB1-205ENST00000472034 TUSC1Q2TAM9 212 aa6.38□□□□□ -1.39
LMNB1-205ENST00000472034 RSBN1LQ6PCB5 846 aaPredicted RBP6.38□□□□□ -1.39
LMNB1-205ENST00000472034 SLC17A8Q8NDX2 589 aa6.38□□□□□ -1.39
LMNB1-205ENST00000472034 SPSB2Q99619 263 aa6.38□□□□□ -1.39
LMNB1-205ENST00000472034 ZBTB3Q9H5J0 574 aa6.38□□□□□ -1.39
LMNB1-205ENST00000472034 PIM2Q9P1W9 311 aa6.38□□□□□ -1.39
LMNB1-205ENST00000472034 THSD7BQ9C0I4 1608 aa6.38□□□□□ -1.39
LMNB1-205ENST00000472034 CCDC88AQ3V6T2 1871 aa6.38□□□□□ -1.39
LMNB1-205ENST00000472034 PALLDQ8WX93 1383 aa6.37□□□□□ -1.39
LMNB1-205ENST00000472034 ZC3H4Q9UPT8 1303 aaKnown RBP6.37□□□□□ -1.39
LMNB1-205ENST00000472034 AOC2O75106 756 aa6.37□□□□□ -1.39
LMNB1-205ENST00000472034 LMNB1P20700 586 aa6.37□□□□□ -1.39
LMNB1-205ENST00000472034 FMR1Q06787 632 aaKnown RBP eCLIP6.37□□□□□ -1.397e-6■■□□□ 12.8
LMNB1-205ENST00000472034 MTMR2Q13614 643 aa6.37□□□□□ -1.39
LMNB1-205ENST00000472034 CYP4F22Q6NT55 531 aa6.37□□□□□ -1.39
LMNB1-205ENST00000472034 LINC00116Q8NCU8 138 aa6.37□□□□□ -1.39
LMNB1-205ENST00000472034 GCC1Q96CN9 775 aa6.37□□□□□ -1.39
LMNB1-205ENST00000472034 TIMELESSQ9UNS1 1208 aa6.37□□□□□ -1.39
LMNB1-205ENST00000472034 C4AP0C0L4 1744 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 ADAMTS7Q9UKP4 1686 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 PITPNM2Q9BZ72 1349 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 NFKBIEO00221 500 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 ADH1BP00325 375 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 SSFA2P28290 1259 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 GUCA2AQ02747 115 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 CSPP1Q1MSJ5 1256 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 TMEM132AQ24JP5 1023 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 RETREG3Q86VR2 466 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 ZNF516Q92618 1163 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 CAPNS2Q96L46 248 aa6.36□□□□□ -1.39
LMNB1-205ENST00000472034 USB1Q9BQ65 265 aaKnown RBP6.36□□□□□ -1.39
LMNB1-205ENST00000472034 ABT1Q9ULW3 272 aaKnown RBP6.36□□□□□ -1.39
LMNB1-205ENST00000472034 NSD3Q9BZ95 1437 aa6.35□□□□□ -1.39
LMNB1-205ENST00000472034 BRCA2P51587 3418 aa6.35□□□□□ -1.39
LMNB1-205ENST00000472034 DDNO94850 711 aaPredicted RBP6.35□□□□□ -1.39
LMNB1-205ENST00000472034 BRICD5Q6PL45 260 aa6.35□□□□□ -1.39
LMNB1-205ENST00000472034 ANKRD24Q8TF21 1146 aa6.35□□□□□ -1.39
LMNB1-205ENST00000472034 HLA-CQ95604 372 aa6.35□□□□□ -1.39
LMNB1-205ENST00000472034 GPR101Q96P66 508 aaPredicted RBP6.35□□□□□ -1.39
LMNB1-205ENST00000472034 SLC6A16Q9GZN6 736 aa6.35□□□□□ -1.39
LMNB1-205ENST00000472034 CCDC87Q9NVE4 849 aa6.35□□□□□ -1.39
LMNB1-205ENST00000472034 UNC80Q8N2C7 3258 aa6.35□□□□□ -1.39
LMNB1-205ENST00000472034 TRIOBPQ9H2D6 2365 aa6.34□□□□□ -1.39
LMNB1-205ENST00000472034 LDHDQ86WU2 507 aa6.34□□□□□ -1.39
LMNB1-205ENST00000472034 MPNDQ8N594 471 aa6.34□□□□□ -1.39
LMNB1-205ENST00000472034 LIMD1Q9UGP4 676 aa6.34□□□□□ -1.39
LMNB1-205ENST00000472034 MEGF6O75095 1541 aa6.34□□□□□ -1.39
LMNB1-205ENST00000472034 VCANP13611 3396 aa6.34□□□□□ -1.4
LMNB1-205ENST00000472034 TMF1P82094 1093 aa6.33□□□□□ -1.4
LMNB1-205ENST00000472034 ITPK1Q13572 414 aa6.33□□□□□ -1.4
LMNB1-205ENST00000472034 MSS51Q4VC12 460 aa6.33□□□□□ -1.4
LMNB1-205ENST00000472034 EAPPQ56P03 285 aaPredicted RBP6.33□□□□□ -1.4
LMNB1-205ENST00000472034 MAP1SQ66K74 1059 aaPredicted RBP6.33□□□□□ -1.4
LMNB1-205ENST00000472034 RNF19BQ6ZMZ0 732 aa6.33□□□□□ -1.4
LMNB1-205ENST00000472034 NBPF15Q8N660 670 aa6.33□□□□□ -1.4
LMNB1-205ENST00000472034 THAP11Q96EK4 314 aa6.33□□□□□ -1.4
LMNB1-205ENST00000472034 TAF1DQ9H5J8 278 aaPredicted RBP6.33□□□□□ -1.4
LMNB1-205ENST00000472034 PCDHGC3Q9UN70 934 aa6.33□□□□□ -1.4
LMNB1-205ENST00000472034 PCDHB15Q9Y5E8 787 aa6.33□□□□□ -1.4
LMNB1-205ENST00000472034 RANBP2P49792 3224 aaKnown RBP6.33□□□□□ -1.4
LMNB1-205ENST00000472034 MAP2P11137 1827 aaKnown RBP6.32□□□□□ -1.4
LMNB1-205ENST00000472034 TLL1O43897 1013 aa6.32□□□□□ -1.4
LMNB1-205ENST00000472034 GYS1P13807 737 aa6.32□□□□□ -1.4
LMNB1-205ENST00000472034 DDR1Q08345 913 aa6.32□□□□□ -1.4
LMNB1-205ENST00000472034 MPRIPQ6WCQ1 1025 aa6.32□□□□□ -1.4
LMNB1-205ENST00000472034 KCNH5Q8NCM2 988 aa6.32□□□□□ -1.4
LMNB1-205ENST00000472034 HELBQ8NG08 1087 aaPredicted RBP6.32□□□□□ -1.4
LMNB1-205ENST00000472034 NKX2-3Q8TAU0 364 aa6.32□□□□□ -1.4
LMNB1-205ENST00000472034 TSC1Q92574 1164 aa6.32□□□□□ -1.4
LMNB1-205ENST00000472034 LTV1Q96GA3 475 aaPredicted RBP6.32□□□□□ -1.4
LMNB1-205ENST00000472034 CABP1Q9NZU7 370 aa6.32□□□□□ -1.4
LMNB1-205ENST00000472034 TTC21BQ7Z4L5 1316 aa6.31□□□□□ -1.4
LMNB1-205ENST00000472034 LOC105371045A0A1W2PR82 267 aa6.31□□□□□ -1.4
LMNB1-205ENST00000472034 LILRB3O75022 631 aa6.31□□□□□ -1.4
LMNB1-205ENST00000472034 NBPF1Q3BBV0 1214 aa6.31□□□□□ -1.4
LMNB1-205ENST00000472034 ERFEQ4G0M1 354 aa6.31□□□□□ -1.4
LMNB1-205ENST00000472034 PROCA1Q8NCQ7 364 aaPredicted RBP6.31□□□□□ -1.4
LMNB1-205ENST00000472034 PRR7Q8TB68 274 aa6.31□□□□□ -1.4
LMNB1-205ENST00000472034 ZCRB1Q8TBF4 217 aaKnown RBP6.31□□□□□ -1.4
LMNB1-205ENST00000472034 SYMPKQ92797 1274 aaKnown RBP6.31□□□□□ -1.4
LMNB1-205ENST00000472034 ZIC5Q96T25 663 aa6.31□□□□□ -1.4
LMNB1-205ENST00000472034 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.31□□□□□ -1.4
LMNB1-205ENST00000472034 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
LMNB1-205ENST00000472034 ADAMTSL1Q8N6G6 1762 aa6.31□□□□□ -1.4
LMNB1-205ENST00000472034 FAM208AQ9UK61 1670 aaKnown RBP6.3□□□□□ -1.4
LMNB1-205ENST00000472034 SRPK2P78362 688 aaKnown RBP6.3□□□□□ -1.4
LMNB1-205ENST00000472034 CIAPIN1Q6FI81 312 aa6.3□□□□□ -1.4
LMNB1-205ENST00000472034 DESI1Q6ICB0 168 aa6.3□□□□□ -1.4
LMNB1-205ENST00000472034 CNTROBQ8N137 903 aa6.3□□□□□ -1.4
LMNB1-205ENST00000472034 NLGN1Q8N2Q7 840 aa6.3□□□□□ -1.4
LMNB1-205ENST00000472034 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.3□□□□□ -1.4
LMNB1-205ENST00000472034 LTN1O94822 1766 aa6.3□□□□□ -1.4
LMNB1-205ENST00000472034 CENPFP49454 3210 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 RGPD2P0DJD1 1756 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 LOC102724428A0A0B4J2F2 783 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 TRAF5O00463 557 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 S1PR4O95977 384 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 JUNDP17535 347 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms