RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 DPP8Q6V1X1 898 aaPredicted RBP25.26■■□□□ 1.63
SORT1-203ENST00000471996 PNISRQ8TF01 805 aaKnown RBP25.26■■□□□ 1.63
SORT1-203ENST00000471996 CNOT7Q9UIV1 285 aaKnown RBP25.26■■□□□ 1.63
SORT1-203ENST00000471996 ABCC4O15439 1325 aa25.26■■□□□ 1.63
SORT1-203ENST00000471996 BBOX1O75936 387 aa25.25■■□□□ 1.63
SORT1-203ENST00000471996 EIF4A1P60842 406 aaKnown RBP25.25■■□□□ 1.63
SORT1-203ENST00000471996 USP48Q86UV5 1035 aa25.25■■□□□ 1.63
SORT1-203ENST00000471996 SP8Q8IXZ3 490 aa25.25■■□□□ 1.63
SORT1-203ENST00000471996 MPNDQ8N594 471 aa25.24■■□□□ 1.63
SORT1-203ENST00000471996 SAGE1Q9NXZ1 904 aa25.24■■□□□ 1.63
SORT1-203ENST00000471996 SHTN1A0MZ66 631 aa25.23■■□□□ 1.63
SORT1-203ENST00000471996 H7C1D1 291 aa25.23■■□□□ 1.63
SORT1-203ENST00000471996 FAM155AB1AL88 458 aaPredicted RBP25.22■■□□□ 1.63
SORT1-203ENST00000471996 SOX10P56693 466 aa25.22■■□□□ 1.63
SORT1-203ENST00000471996 RGMBQ6NW40 437 aa25.22■■□□□ 1.63
SORT1-203ENST00000471996 UTP14AQ9BVJ6 771 aaKnown RBP25.22■■□□□ 1.63
SORT1-203ENST00000471996 DLK2Q6UY11 383 aa25.21■■□□□ 1.63
SORT1-203ENST00000471996 MICALL2Q8IY33 904 aa25.21■■□□□ 1.63
SORT1-203ENST00000471996 YDJCA8MPS7 323 aa25.2■■□□□ 1.62
SORT1-203ENST00000471996 ERBB4Q15303 1308 aa25.19■■□□□ 1.62
SORT1-203ENST00000471996 CCDC102AQ96A19 550 aa25.19■■□□□ 1.62
SORT1-203ENST00000471996 PDE4DIPQ5VU43 2346 aa25.19■■□□□ 1.62
SORT1-203ENST00000471996 KIF23Q02241 960 aaPredicted RBP25.18■■□□□ 1.62
SORT1-203ENST00000471996 DPF2Q92785 391 aa25.18■■□□□ 1.62
SORT1-203ENST00000471996 GBA2Q9HCG7 927 aaPredicted RBP25.18■■□□□ 1.62
SORT1-203ENST00000471996 PPP2R1AP30153 589 aa25.17■■□□□ 1.62
SORT1-203ENST00000471996 SAMD7Q7Z3H4 446 aa25.17■■□□□ 1.62
SORT1-203ENST00000471996 KRT26Q7Z3Y9 468 aa25.17■■□□□ 1.62
SORT1-203ENST00000471996 C2orf69Q8N8R5 385 aa25.17■■□□□ 1.62
SORT1-203ENST00000471996 RNF186Q9NXI6 227 aa25.17■■□□□ 1.62
SORT1-203ENST00000471996 ZBTB12Q9Y330 459 aaPredicted RBP25.17■■□□□ 1.62
SORT1-203ENST00000471996 TRPA1O75762 1119 aa25.16■■□□□ 1.62
SORT1-203ENST00000471996 PRPF38BQ5VTL8 546 aaKnown RBP25.16■■□□□ 1.62
SORT1-203ENST00000471996 DDX46Q7L014 1031 aaKnown RBP25.16■■□□□ 1.62
SORT1-203ENST00000471996 LRP10Q7Z4F1 713 aa25.16■■□□□ 1.62
SORT1-203ENST00000471996 KDM3BQ7LBC6 1761 aa25.16■■□□□ 1.62
SORT1-203ENST00000471996 ZNF157P51786 506 aaPredicted RBP25.15■■□□□ 1.62
SORT1-203ENST00000471996 GRAPQ13588 217 aa25.15■■□□□ 1.62
SORT1-203ENST00000471996 GRAPLQ8TC17 118 aaPredicted RBP25.15■■□□□ 1.62
SORT1-203ENST00000471996 HCLS1P14317 486 aaPredicted RBP25.14■■□□□ 1.62
SORT1-203ENST00000471996 THUMPD2Q9BTF0 503 aaKnown RBP25.14■■□□□ 1.62
SORT1-203ENST00000471996 PSMD14O00487 310 aa25.13■■□□□ 1.61
SORT1-203ENST00000471996 PDIA6Q15084 440 aa25.13■■□□□ 1.61
SORT1-203ENST00000471996 TBC1D10BQ4KMP7 808 aaPredicted RBP25.13■■□□□ 1.61
SORT1-203ENST00000471996 ADM5C9JUS6 153 aa25.12■■□□□ 1.61
SORT1-203ENST00000471996 EGFRP00533 1210 aa25.12■■□□□ 1.61
SORT1-203ENST00000471996 NEFMP07197 916 aa25.12■■□□□ 1.61
SORT1-203ENST00000471996 TMC4Q7Z404 712 aa25.12■■□□□ 1.61
SORT1-203ENST00000471996 DCPSQ96C86 337 aaKnown RBP25.12■■□□□ 1.61
SORT1-203ENST00000471996 CTU1Q7Z7A3 348 aaKnown RBP25.11■■□□□ 1.61
SORT1-203ENST00000471996 NLRP10Q86W26 655 aa25.11■■□□□ 1.61
SORT1-203ENST00000471996 CCER1Q8TC90 406 aaPredicted RBP25.11■■□□□ 1.61
SORT1-203ENST00000471996 CSRNP1Q96S65 589 aa25.11■■□□□ 1.61
SORT1-203ENST00000471996 SLC10A3P09131 477 aa25.1■■□□□ 1.61
SORT1-203ENST00000471996 HSP90AB3PQ58FF7 597 aa25.1■■□□□ 1.61
SORT1-203ENST00000471996 DUOX1Q9NRD9 1551 aa25.1■■□□□ 1.61
SORT1-203ENST00000471996 RPS12P25398 132 aaKnown RBP25.09■■□□□ 1.61
SORT1-203ENST00000471996 WASHC4Q2M389 1173 aa25.09■■□□□ 1.61
SORT1-203ENST00000471996 DBNDD1Q9H9R9 158 aa25.09■■□□□ 1.61
SORT1-203ENST00000471996 EIF2S2P20042 333 aaKnown RBP25.08■■□□□ 1.61
SORT1-203ENST00000471996 PROSER3Q2NL68 480 aa25.08■■□□□ 1.61
SORT1-203ENST00000471996 RBM26Q5T8P6 1007 aaKnown RBP25.08■■□□□ 1.61
SORT1-203ENST00000471996 TRMT112Q9UI30 125 aaKnown RBP25.08■■□□□ 1.61
SORT1-203ENST00000471996 NFE2L2Q16236 605 aa25.07■■□□□ 1.6
SORT1-203ENST00000471996 SH3TC1Q8TE82 1336 aa25.07■■□□□ 1.6
SORT1-203ENST00000471996 ANXA1P04083 346 aa25.06■■□□□ 1.6
SORT1-203ENST00000471996 REM2Q8IYK8 340 aaPredicted RBP25.06■■□□□ 1.6
SORT1-203ENST00000471996 PLEKHF1Q96S99 279 aa25.06■■□□□ 1.6
SORT1-203ENST00000471996 NSFL1CQ9UNZ2 370 aaKnown RBP25.06■■□□□ 1.6
SORT1-203ENST00000471996 ANKRD36CQ5JPF3 1778 aa25.05■■□□□ 1.6
SORT1-203ENST00000471996 RIMBP2O15034 1052 aa25.05■■□□□ 1.6
SORT1-203ENST00000471996 TCIRG1Q13488 830 aa25.05■■□□□ 1.6
SORT1-203ENST00000471996 SULF1Q8IWU6 871 aa25.05■■□□□ 1.6
SORT1-203ENST00000471996 HPS5Q9UPZ3 1129 aa25.05■■□□□ 1.6
SORT1-203ENST00000471996 LAMB2P55268 1798 aa25.04■■□□□ 1.6
SORT1-203ENST00000471996 KIF4BQ2VIQ3 1234 aa25.04■■□□□ 1.6
SORT1-203ENST00000471996 COPS6Q7L5N1 327 aa25.04■■□□□ 1.6
SORT1-203ENST00000471996 KCNQ5Q9NR82 932 aa25.04■■□□□ 1.6
SORT1-203ENST00000471996 TSPYL4Q9UJ04 414 aa25.04■■□□□ 1.6
SORT1-203ENST00000471996 RTL9Q8NET4 1388 aa25.04■■□□□ 1.6
SORT1-203ENST00000471996 ECE2O60344 883 aa25.03■■□□□ 1.6
SORT1-203ENST00000471996 GGA3Q9NZ52 723 aa25.03■■□□□ 1.6
SORT1-203ENST00000471996 POLLQ9UGP5 575 aa25.03■■□□□ 1.6
SORT1-203ENST00000471996 C6orf229H3BNL8 230 aa25.02■■□□□ 1.6
SORT1-203ENST00000471996 AIMP1Q12904 312 aaKnown RBP25.02■■□□□ 1.6
SORT1-203ENST00000471996 RASAL3Q86YV0 1011 aa25.02■■□□□ 1.6
SORT1-203ENST00000471996 XAGE3Q8WTP9 111 aa25.02■■□□□ 1.6
SORT1-203ENST00000471996 CDCA5Q96FF9 252 aa25.02■■□□□ 1.6
SORT1-203ENST00000471996 PKN2Q16513 984 aaKnown RBP25.01■■□□□ 1.59
SORT1-203ENST00000471996 DOK7Q18PE1 504 aa25.01■■□□□ 1.59
SORT1-203ENST00000471996 CELF1Q92879 486 aaKnown RBP25.01■■□□□ 1.59
SORT1-203ENST00000471996 DLG5Q8TDM6 1919 aa25.01■■□□□ 1.59
SORT1-203ENST00000471996 LRRC37AA6NMS7 1700 aa25■■□□□ 1.59
SORT1-203ENST00000471996 GPSM2P81274 684 aa25■■□□□ 1.59
SORT1-203ENST00000471996 EYA3Q99504 573 aa25■■□□□ 1.59
SORT1-203ENST00000471996 ASTN2O75129 1339 aaPredicted RBP24.99■■□□□ 1.59
SORT1-203ENST00000471996 VIL1P09327 827 aaKnown RBP24.99■■□□□ 1.59
SORT1-203ENST00000471996 SF3B3Q15393 1217 aaKnown RBP24.99■■□□□ 1.59
SORT1-203ENST00000471996 AKAP11Q9UKA4 1901 aa24.98■■□□□ 1.59
SORT1-203ENST00000471996 POLR2AP24928 1970 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms