RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 DACT1Q9NYF0 836 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 SRGAP3O43295 1099 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 ST3GAL1Q11201 340 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 CREBRFQ8IUR6 639 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 CEP120Q8N960 986 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 SPATA32Q96LK8 384 aa13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 LARP6Q9BRS8 491 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-204ENST00000470951 CPA1P15085 419 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 TPD52L1Q16890 204 aaPredicted RBP13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 PRPF40BQ6NWY9 871 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 ZNF397Q8NF99 534 aaPredicted RBP13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 KIF18AQ8NI77 898 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 CLIP2Q9UDT6 1046 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 ACEP12821 1306 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 ADAMTS13Q76LX8 1427 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 ZNF165P49910 485 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 LRMPQ12912 555 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 ADCK5Q3MIX3 580 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 SLFNL1Q499Z3 407 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 CEP135Q66GS9 1140 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 ZNF526Q8TF50 670 aaPredicted RBP13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 EVI5LQ96CN4 794 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 TIGD1Q96MW7 591 aa13.33□□□□□ -0.28
SRGAP3-204ENST00000470951 PTH1RQ03431 593 aa13.32□□□□□ -0.28
SRGAP3-204ENST00000470951 CAMK4Q16566 473 aa13.32□□□□□ -0.28
SRGAP3-204ENST00000470951 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
SRGAP3-204ENST00000470951 KRT222Q8N1A0 295 aa13.32□□□□□ -0.28
SRGAP3-204ENST00000470951 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-204ENST00000470951 MRFAP1L1Q96HT8 127 aa13.32□□□□□ -0.28
SRGAP3-204ENST00000470951 SNRKQ9NRH2 765 aa13.32□□□□□ -0.28
SRGAP3-204ENST00000470951 KCND1Q9NSA2 647 aa13.32□□□□□ -0.28
SRGAP3-204ENST00000470951 ECHDC1Q9NTX5 307 aa13.32□□□□□ -0.28
SRGAP3-204ENST00000470951 KIF2AO00139 706 aaPredicted RBP13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 MTX1Q13505 466 aa13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 TAF7Q15545 349 aaPredicted RBP13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 ERC1Q8IUD2 1116 aa13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 TPCN1Q9ULQ1 816 aa13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 SLFN14P0C7P3 912 aa13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 CAPN2P17655 700 aa13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 CKAP2LQ8IYA6 745 aa13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 CACTINQ8WUQ7 758 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 LEO1Q8WVC0 666 aaPredicted RBP13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 MAP4K1Q92918 833 aa13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 NRBP1Q9UHY1 535 aa13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 PTPRUQ92729 1446 aa13.31□□□□□ -0.28
SRGAP3-204ENST00000470951 CTAGE5O15320 804 aa13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 HOXB7P09629 217 aa13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 HDGFL1Q5TGJ6 251 aa13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 CREB3L3Q68CJ9 461 aa13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 LRRC8AQ8IWT6 810 aa13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 PRDM16Q9HAZ2 1276 aa13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 PATL2C9JE40 543 aaKnown RBP13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 NYAP1Q6ZVC0 841 aa13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 ERO1AQ96HE7 468 aa13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 EYA1Q99502 592 aa13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 FAM53CQ9NYF3 392 aa13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 RBM8AQ9Y5S9 174 aaKnown RBP13.3□□□□□ -0.28
SRGAP3-204ENST00000470951 GOLGA6L19H0YKK7 550 aa13.29□□□□□ -0.28
SRGAP3-204ENST00000470951 TERF2Q15554 542 aa13.29□□□□□ -0.28
SRGAP3-204ENST00000470951 PTPN14Q15678 1187 aa13.29□□□□□ -0.28
SRGAP3-204ENST00000470951 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
SRGAP3-204ENST00000470951 MYH15Q9Y2K3 1946 aa13.29□□□□□ -0.28
SRGAP3-204ENST00000470951 BLOC1S2Q6QNY1 142 aa13.29□□□□□ -0.28
SRGAP3-204ENST00000470951 FERMT3Q86UX7 667 aa13.29□□□□□ -0.28
SRGAP3-204ENST00000470951 HMG20BQ9P0W2 317 aa13.29□□□□□ -0.28
SRGAP3-204ENST00000470951 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.29□□□□□ -0.28
SRGAP3-204ENST00000470951 OS9Q13438 667 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 TSGA10IPQ3SY00 556 aa13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 DNAJC25Q9H1X3 360 aa13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 CHMP3Q9Y3E7 222 aa13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 TBX22Q9Y458 520 aa13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 ZNF335Q9H4Z2 1342 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 IQCB1Q15051 598 aa13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 CC2D2BQ6DHV5 1058 aa13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 BICD2Q8TD16 824 aa13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 ZSCAN16Q9H4T2 348 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 CFAP45Q9UL16 551 aa13.28□□□□□ -0.28
SRGAP3-204ENST00000470951 SLC27A2O14975 620 aa13.27□□□□□ -0.28
SRGAP3-204ENST00000470951 NR1I2O75469 434 aa13.27□□□□□ -0.28
SRGAP3-204ENST00000470951 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.28
SRGAP3-204ENST00000470951 NBPF7P0C2Y1 421 aaPredicted RBP13.27□□□□□ -0.28
SRGAP3-204ENST00000470951 RPS6KB1P23443 525 aa13.27□□□□□ -0.28
SRGAP3-204ENST00000470951 DHX8Q14562 1220 aaKnown RBP13.27□□□□□ -0.28
SRGAP3-204ENST00000470951 STX1AQ16623 288 aa13.27□□□□□ -0.28
SRGAP3-204ENST00000470951 CCDC144BQ3MJ40 725 aa13.27□□□□□ -0.28
SRGAP3-204ENST00000470951 CCDC144CPQ8IYA2 1237 aa13.27□□□□□ -0.28
SRGAP3-204ENST00000470951 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.28
SRGAP3-204ENST00000470951 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.28
SRGAP3-204ENST00000470951 TUBB4AP04350 444 aa13.27□□□□□ -0.29
SRGAP3-204ENST00000470951 AMPHP49418 695 aa13.27□□□□□ -0.29
SRGAP3-204ENST00000470951 EGFL6Q8IUX8 553 aa13.27□□□□□ -0.29
SRGAP3-204ENST00000470951 IL17REQ8NFR9 667 aa13.27□□□□□ -0.29
SRGAP3-204ENST00000470951 PHAXQ9H814 394 aaKnown RBP13.27□□□□□ -0.29
SRGAP3-204ENST00000470951 DIP2AQ14689 1571 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms