RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 GREM2Q9H772 168 aa14.06□□□□□ -0.16
SREBF1-209ENST00000470247 SRGAP3O43295 1099 aa14.05□□□□□ -0.16
SREBF1-209ENST00000470247 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
SREBF1-209ENST00000470247 ST5P78524 1137 aa14.05□□□□□ -0.16
SREBF1-209ENST00000470247 FAM161AQ3B820 660 aa14.05□□□□□ -0.16
SREBF1-209ENST00000470247 CRY2Q49AN0 593 aa14.05□□□□□ -0.16
SREBF1-209ENST00000470247 B4GALNT3Q6L9W6 998 aa14.05□□□□□ -0.16
SREBF1-209ENST00000470247 NLRP3Q96P20 1036 aa14.05□□□□□ -0.16
SREBF1-209ENST00000470247 CCDC85AQ96PX6 553 aaPredicted RBP14.05□□□□□ -0.16
SREBF1-209ENST00000470247 PTPN12Q05209 780 aaKnown RBP14.04□□□□□ -0.16
SREBF1-209ENST00000470247 DCTPP1Q9H773 170 aa14.04□□□□□ -0.16
SREBF1-209ENST00000470247 SEC31BQ9NQW1 1179 aa14.04□□□□□ -0.16
SREBF1-209ENST00000470247 PA2G4Q9UQ80 394 aaKnown RBP14.04□□□□□ -0.16
SREBF1-209ENST00000470247 KDM2BQ8NHM5 1336 aa14.04□□□□□ -0.16
SREBF1-209ENST00000470247 RTL9Q8NET4 1388 aa14.04□□□□□ -0.16
SREBF1-209ENST00000470247 TNRC6CQ9HCJ0 1690 aaKnown RBP14.04□□□□□ -0.16
SREBF1-209ENST00000470247 NPHP1O15259 732 aa14.03□□□□□ -0.16
SREBF1-209ENST00000470247 ITGA6P23229 1130 aa14.03□□□□□ -0.16
SREBF1-209ENST00000470247 CCDC152Q4G0S7 254 aa14.03□□□□□ -0.16
SREBF1-209ENST00000470247 KLHDC4Q8TBB5 520 aa14.03□□□□□ -0.16
SREBF1-209ENST00000470247 ZNF594Q96JF6 807 aaPredicted RBP14.03□□□□□ -0.16
SREBF1-209ENST00000470247 RWDD1Q9H446 243 aaPredicted RBP14.03□□□□□ -0.16
SREBF1-209ENST00000470247 COPRSQ9NQ92 184 aa14.03□□□□□ -0.16
SREBF1-209ENST00000470247 NOP58Q9Y2X3 529 aaKnown RBP14.03□□□□□ -0.16
SREBF1-209ENST00000470247 LAMB2P55268 1798 aa14.03□□□□□ -0.16
SREBF1-209ENST00000470247 ANKRD31Q8N7Z5 1873 aa14.02□□□□□ -0.16
SREBF1-209ENST00000470247 COL4A1P02462 1669 aa14.02□□□□□ -0.16
SREBF1-209ENST00000470247 C10orf71Q711Q0 1435 aa14.02□□□□□ -0.16
SREBF1-209ENST00000470247 HMMRO75330 724 aa14.02□□□□□ -0.17
SREBF1-209ENST00000470247 POLD1P28340 1107 aa14.02□□□□□ -0.17
SREBF1-209ENST00000470247 HOXA10P31260 410 aaPredicted RBP14.02□□□□□ -0.17
SREBF1-209ENST00000470247 SMC5Q8IY18 1101 aa14.02□□□□□ -0.17
SREBF1-209ENST00000470247 CCDC136Q96JN2 1154 aa14.02□□□□□ -0.17
SREBF1-209ENST00000470247 CHMP3Q9Y3E7 222 aa14.02□□□□□ -0.17
SREBF1-209ENST00000470247 SRGNP10124 158 aa14.01□□□□□ -0.17
SREBF1-209ENST00000470247 IFIT5Q13325 482 aaKnown RBP14.01□□□□□ -0.17
SREBF1-209ENST00000470247 CELF1Q92879 486 aaKnown RBP14.01□□□□□ -0.17
SREBF1-209ENST00000470247 SPON1Q9HCB6 807 aa14.01□□□□□ -0.17
SREBF1-209ENST00000470247 MYH3P11055 1940 aa14.01□□□□□ -0.17
SREBF1-209ENST00000470247 ANKRD18BA2A2Z9 1011 aa14□□□□□ -0.17
SREBF1-209ENST00000470247 PDE6BP35913 854 aa14□□□□□ -0.17
SREBF1-209ENST00000470247 CCDC57Q2TAC2 916 aa14□□□□□ -0.17
SREBF1-209ENST00000470247 ATG9AQ7Z3C6 839 aa14□□□□□ -0.17
SREBF1-209ENST00000470247 PUS3Q9BZE2 481 aaKnown RBP14□□□□□ -0.17
SREBF1-209ENST00000470247 SURF6O75683 361 aaKnown RBP13.99□□□□□ -0.17
SREBF1-209ENST00000470247 KCNA3P22001 575 aa13.99□□□□□ -0.17
SREBF1-209ENST00000470247 CHRNA5P30532 468 aa13.99□□□□□ -0.17
SREBF1-209ENST00000470247 LRRC24Q50LG9 513 aa13.99□□□□□ -0.17
SREBF1-209ENST00000470247 CRAMP1Q96RY5 1269 aa13.99□□□□□ -0.17
SREBF1-209ENST00000470247 EXOC6BQ9Y2D4 811 aa13.99□□□□□ -0.17
SREBF1-209ENST00000470247 RIPOR2Q9Y4F9 1068 aa13.99□□□□□ -0.17
SREBF1-209ENST00000470247 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-209ENST00000470247 EYA2O00167 538 aa13.98□□□□□ -0.17
SREBF1-209ENST00000470247 SASH1O94885 1247 aa13.98□□□□□ -0.17
SREBF1-209ENST00000470247 RPS8P62241 208 aaKnown RBP13.98□□□□□ -0.17
SREBF1-209ENST00000470247 DDX46Q7L014 1031 aaKnown RBP13.98□□□□□ -0.17
SREBF1-209ENST00000470247 C2CD5Q86YS7 1000 aa13.98□□□□□ -0.17
SREBF1-209ENST00000470247 SIL1Q9H173 461 aa13.98□□□□□ -0.17
SREBF1-209ENST00000470247 CIAO1O76071 339 aa13.97□□□□□ -0.17
SREBF1-209ENST00000470247 NPR1P16066 1061 aa13.97□□□□□ -0.17
SREBF1-209ENST00000470247 GRAPQ13588 217 aa13.97□□□□□ -0.17
SREBF1-209ENST00000470247 CENPQQ7L2Z9 268 aaPredicted RBP13.97□□□□□ -0.17
SREBF1-209ENST00000470247 SLC51AQ86UW1 340 aa13.97□□□□□ -0.17
SREBF1-209ENST00000470247 GRAPLQ8TC17 118 aaPredicted RBP13.97□□□□□ -0.17
SREBF1-209ENST00000470247 GCC1Q96CN9 775 aa13.97□□□□□ -0.17
SREBF1-209ENST00000470247 MASTLQ96GX5 879 aa13.97□□□□□ -0.17
SREBF1-209ENST00000470247 RBM17Q96I25 401 aaKnown RBP13.97□□□□□ -0.17
SREBF1-209ENST00000470247 CDC5LQ99459 802 aaKnown RBP13.97□□□□□ -0.17
SREBF1-209ENST00000470247 FBXO3Q9UK99 471 aa13.97□□□□□ -0.17
SREBF1-209ENST00000470247 PDZRN3Q9UPQ7 1066 aa13.97□□□□□ -0.17
SREBF1-209ENST00000470247 CD2APQ9Y5K6 639 aa13.97□□□□□ -0.17
SREBF1-209ENST00000470247 TAF1P21675 1872 aa13.97□□□□□ -0.17
SREBF1-209ENST00000470247 H0YIN7 160 aa13.96□□□□□ -0.17
SREBF1-209ENST00000470247 DPEP1P16444 411 aa13.96□□□□□ -0.17
SREBF1-209ENST00000470247 TGFB2P61812 414 aa13.96□□□□□ -0.17
SREBF1-209ENST00000470247 STYK1Q6J9G0 422 aa13.96□□□□□ -0.17
SREBF1-209ENST00000470247 LDHAL6AQ6ZMR3 332 aa13.96□□□□□ -0.17
SREBF1-209ENST00000470247 ANKRD18AQ8IVF6 992 aa13.96□□□□□ -0.17
SREBF1-209ENST00000470247 RPGRQ92834 1020 aaKnown RBP13.96□□□□□ -0.17
SREBF1-209ENST00000470247 BSDC1Q9NW68 430 aaPredicted RBP13.96□□□□□ -0.17
SREBF1-209ENST00000470247 KIF13BQ9NQT8 1826 aa13.96□□□□□ -0.17
SREBF1-209ENST00000470247 LRP5O75197 1615 aa13.95□□□□□ -0.18
SREBF1-209ENST00000470247 A0A0G2JLW4 131 aa13.95□□□□□ -0.18
SREBF1-209ENST00000470247 RAB11FIP3O75154 756 aa13.95□□□□□ -0.18
SREBF1-209ENST00000470247 BBOX1O75936 387 aa13.95□□□□□ -0.18
SREBF1-209ENST00000470247 G3BP1Q13283 466 aaKnown RBP eCLIP13.95□□□□□ -0.18
SREBF1-209ENST00000470247 TAF7LQ5H9L4 462 aa13.95□□□□□ -0.18
SREBF1-209ENST00000470247 VGLL2Q8N8G2 317 aa13.95□□□□□ -0.18
SREBF1-209ENST00000470247 RHPN1Q8TCX5 695 aa13.95□□□□□ -0.18
SREBF1-209ENST00000470247 COL11A2P13942 1736 aaPredicted RBP13.95□□□□□ -0.18
SREBF1-209ENST00000470247 SMARCA5O60264 1052 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-209ENST00000470247 ALDH1B1P30837 517 aa13.94□□□□□ -0.18
SREBF1-209ENST00000470247 IGHMBP2P38935 993 aaKnown RBP13.94□□□□□ -0.18
SREBF1-209ENST00000470247 IL15P40933 162 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-209ENST00000470247 NUCB1Q02818 461 aa13.94□□□□□ -0.18
SREBF1-209ENST00000470247 HSP90AB4PQ58FF6 505 aa13.94□□□□□ -0.18
SREBF1-209ENST00000470247 ZNF622Q969S3 477 aaKnown RBP eCLIP13.94□□□□□ -0.181e-7■■■□□ 18.8
SREBF1-209ENST00000470247 MPHOSPH8Q99549 860 aa13.94□□□□□ -0.18
SREBF1-209ENST00000470247 KIAA1551Q9HCM1 1747 aa13.94□□□□□ -0.18
SREBF1-209ENST00000470247 MINPP1Q9UNW1 487 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms