RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 ZSCAN31Q96LW9 406 aaPredicted RBP24.05■■□□□ 1.44
CDHR3-207ENST00000470188 MED23Q9ULK4 1368 aa24.04■■□□□ 1.44
CDHR3-207ENST00000470188 FOXD4L6Q3SYB3 417 aaPredicted RBP24.04■■□□□ 1.44
CDHR3-207ENST00000470188 FOXD4L3Q6VB84 417 aaPredicted RBP24.04■■□□□ 1.44
CDHR3-207ENST00000470188 MTERF4Q7Z6M4 381 aaKnown RBP24.04■■□□□ 1.44
CDHR3-207ENST00000470188 SLAIN2Q9P270 581 aa24.04■■□□□ 1.44
CDHR3-207ENST00000470188 SLC27A2O14975 620 aa24.03■■□□□ 1.44
CDHR3-207ENST00000470188 IL2RBP14784 551 aa24.03■■□□□ 1.44
CDHR3-207ENST00000470188 NKX1-1Q15270 411 aaPredicted RBP24.03■■□□□ 1.44
CDHR3-207ENST00000470188 LMBR1LQ6UX01 489 aa24.03■■□□□ 1.44
CDHR3-207ENST00000470188 SH2B1Q9NRF2 756 aaPredicted RBP24.03■■□□□ 1.44
CDHR3-207ENST00000470188 H7C1W4 665 aa24.02■■□□□ 1.44
CDHR3-207ENST00000470188 ZSCAN22P10073 491 aaPredicted RBP24.02■■□□□ 1.44
CDHR3-207ENST00000470188 RNF20Q5VTR2 975 aa24.02■■□□□ 1.44
CDHR3-207ENST00000470188 TTLL7Q6ZT98 887 aa24.02■■□□□ 1.44
CDHR3-207ENST00000470188 EDC3Q96F86 508 aaKnown RBP24.02■■□□□ 1.44
CDHR3-207ENST00000470188 CARD10Q9BWT7 1032 aa24.02■■□□□ 1.44
CDHR3-207ENST00000470188 STX6O43752 255 aa24.02■■□□□ 1.44
CDHR3-207ENST00000470188 SYT1P21579 422 aa24.02■■□□□ 1.44
CDHR3-207ENST00000470188 PSMA5P28066 241 aa24.02■■□□□ 1.44
CDHR3-207ENST00000470188 CCDC83Q8IWF9 413 aa24.02■■□□□ 1.44
CDHR3-207ENST00000470188 CWC25Q9NXE8 425 aaPredicted RBP24.02■■□□□ 1.44
CDHR3-207ENST00000470188 KCPQ6ZWJ8 1503 aa24.02■■□□□ 1.44
CDHR3-207ENST00000470188 UBR2Q8IWV8 1755 aa24.01■■□□□ 1.43
CDHR3-207ENST00000470188 FOXO4P98177 505 aa24.01■■□□□ 1.43
CDHR3-207ENST00000470188 DDX54Q8TDD1 881 aaKnown RBP24.01■■□□□ 1.43
CDHR3-207ENST00000470188 CHMP3Q9Y3E7 222 aa24.01■■□□□ 1.43
CDHR3-207ENST00000470188 A1BGP04217 495 aa24.01■■□□□ 1.43
CDHR3-207ENST00000470188 SYCE3A1L190 88 aa24■■□□□ 1.43
CDHR3-207ENST00000470188 ZNF589Q86UQ0 364 aaPredicted RBP24■■□□□ 1.43
CDHR3-207ENST00000470188 DBNDD2Q9BQY9 259 aa24■■□□□ 1.43
CDHR3-207ENST00000470188 GDPD2Q9HCC8 539 aa24■■□□□ 1.43
CDHR3-207ENST00000470188 DYNC1I1O14576 645 aa23.99■■□□□ 1.43
CDHR3-207ENST00000470188 JCADQ9P266 1359 aa23.99■■□□□ 1.43
CDHR3-207ENST00000470188 UQCRHLA0A096LP55 91 aa23.99■■□□□ 1.43
CDHR3-207ENST00000470188 UQCRHP07919 91 aa23.99■■□□□ 1.43
CDHR3-207ENST00000470188 USP48Q86UV5 1035 aa23.99■■□□□ 1.43
CDHR3-207ENST00000470188 STRN4Q9NRL3 753 aa23.99■■□□□ 1.43
CDHR3-207ENST00000470188 GJB2P29033 226 aa23.98■■□□□ 1.43
CDHR3-207ENST00000470188 PAPPAQ13219 1627 aa23.98■■□□□ 1.43
CDHR3-207ENST00000470188 RFX7Q2KHR2 1363 aa23.98■■□□□ 1.43
CDHR3-207ENST00000470188 ME3Q16798 604 aa23.98■■□□□ 1.43
CDHR3-207ENST00000470188 SYAP1Q96A49 352 aaPredicted RBP23.98■■□□□ 1.43
CDHR3-207ENST00000470188 DNAJC2Q99543 621 aaKnown RBP23.98■■□□□ 1.43
CDHR3-207ENST00000470188 ZBTB3Q9H5J0 574 aa23.98■■□□□ 1.43
CDHR3-207ENST00000470188 HMG20BQ9P0W2 317 aa23.98■■□□□ 1.43
CDHR3-207ENST00000470188 NUP188Q5SRE5 1749 aa23.97■■□□□ 1.43
CDHR3-207ENST00000470188 TAF5LO75529 589 aa23.97■■□□□ 1.43
CDHR3-207ENST00000470188 RBM10P98175 930 aaKnown RBP23.97■■□□□ 1.43
CDHR3-207ENST00000470188 BLOC1S2Q6QNY1 142 aa23.97■■□□□ 1.43
CDHR3-207ENST00000470188 TMEM87AQ8NBN3 555 aa23.97■■□□□ 1.43
CDHR3-207ENST00000470188 HAUS7Q99871 368 aa23.97■■□□□ 1.43
CDHR3-207ENST00000470188 TNS2Q63HR2 1409 aa23.96■■□□□ 1.43
CDHR3-207ENST00000470188 GADD45BO75293 160 aaPredicted RBP23.96■■□□□ 1.43
CDHR3-207ENST00000470188 F13A1P00488 732 aa23.96■■□□□ 1.43
CDHR3-207ENST00000470188 EVA1CP58658 441 aa23.96■■□□□ 1.43
CDHR3-207ENST00000470188 TPCN1Q9ULQ1 816 aa23.96■■□□□ 1.43
CDHR3-207ENST00000470188 NDUFB9Q9Y6M9 179 aa23.96■■□□□ 1.43
CDHR3-207ENST00000470188 CCDC191Q8NCU4 936 aa23.96■■□□□ 1.43
CDHR3-207ENST00000470188 FAM13BQ9NYF5 915 aa23.96■■□□□ 1.43
CDHR3-207ENST00000470188 ATP6V1DQ9Y5K8 247 aa23.96■■□□□ 1.43
CDHR3-207ENST00000470188 ST3GAL1Q11201 340 aa23.95■■□□□ 1.42
CDHR3-207ENST00000470188 SASS6Q6UVJ0 657 aa23.95■■□□□ 1.42
CDHR3-207ENST00000470188 ABCA3Q99758 1704 aa23.95■■□□□ 1.42
CDHR3-207ENST00000470188 LTBP4Q8N2S1 1624 aa23.95■■□□□ 1.42
CDHR3-207ENST00000470188 ANKRD1Q15327 319 aa23.95■■□□□ 1.42
CDHR3-207ENST00000470188 CNPY2Q9Y2B0 182 aa23.95■■□□□ 1.42
CDHR3-207ENST00000470188 RPS6KB1P23443 525 aa23.94■■□□□ 1.42
CDHR3-207ENST00000470188 TSGA10IPQ3SY00 556 aa23.94■■□□□ 1.42
CDHR3-207ENST00000470188 ATG9AQ7Z3C6 839 aa23.94■■□□□ 1.42
CDHR3-207ENST00000470188 NECAB1Q8N987 351 aa23.94■■□□□ 1.42
CDHR3-207ENST00000470188 TAF6LQ9Y6J9 622 aa23.94■■□□□ 1.42
CDHR3-207ENST00000470188 SHANK3Q9BYB0 1731 aa23.94■■□□□ 1.42
CDHR3-207ENST00000470188 USPL1Q5W0Q7 1092 aa23.93■■□□□ 1.42
CDHR3-207ENST00000470188 TJP1Q07157 1748 aa23.93■■□□□ 1.42
CDHR3-207ENST00000470188 COL9A3Q14050 684 aaPredicted RBP23.93■■□□□ 1.42
CDHR3-207ENST00000470188 ZNF609O15014 1411 aa23.93■■□□□ 1.42
CDHR3-207ENST00000470188 DDX46Q7L014 1031 aaKnown RBP23.92■■□□□ 1.42
CDHR3-207ENST00000470188 ALDH8A1Q9H2A2 487 aaPredicted RBP23.92■■□□□ 1.42
CDHR3-207ENST00000470188 MTMR6Q9Y217 621 aa23.92■■□□□ 1.42
CDHR3-207ENST00000470188 IL15P40933 162 aaPredicted RBP23.92■■□□□ 1.42
CDHR3-207ENST00000470188 NEUROD6Q96NK8 337 aa23.92■■□□□ 1.42
CDHR3-207ENST00000470188 GPR108Q9NPR9 543 aa23.92■■□□□ 1.42
CDHR3-207ENST00000470188 TMOD3Q9NYL9 352 aa23.92■■□□□ 1.42
CDHR3-207ENST00000470188 CCDC9Q9Y3X0 531 aaKnown RBP23.92■■□□□ 1.42
CDHR3-207ENST00000470188 KRT32Q14532 448 aa23.91■■□□□ 1.42
CDHR3-207ENST00000470188 TCEANC2Q96MN5 208 aa23.91■■□□□ 1.42
CDHR3-207ENST00000470188 DTNBO60941 627 aa23.91■■□□□ 1.42
CDHR3-207ENST00000470188 PHF14O94880 888 aa23.91■■□□□ 1.42
CDHR3-207ENST00000470188 MCMDC2Q4G0Z9 681 aa23.91■■□□□ 1.42
CDHR3-207ENST00000470188 KBTBD3Q8NAB2 608 aa23.91■■□□□ 1.42
CDHR3-207ENST00000470188 TSPY26PQ9H489 355 aa23.91■■□□□ 1.42
CDHR3-207ENST00000470188 CHGBP05060 677 aa23.89■■□□□ 1.42
CDHR3-207ENST00000470188 CCDC129Q6ZRS4 1044 aa23.89■■□□□ 1.42
CDHR3-207ENST00000470188 SEC62Q99442 399 aaKnown RBP23.89■■□□□ 1.42
CDHR3-207ENST00000470188 U3KPZ7 1027 aaPredicted RBP23.89■■□□□ 1.42
CDHR3-207ENST00000470188 EYA2O00167 538 aa23.89■■□□□ 1.41
CDHR3-207ENST00000470188 TOB2Q14106 344 aaPredicted RBP23.89■■□□□ 1.41
CDHR3-207ENST00000470188 TCHHQ07283 1943 aa23.88■■□□□ 1.41
CDHR3-207ENST00000470188 VPS37CA5D8V6 355 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms