RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 KIF6Q6ZMV9 814 aa16.06■□□□□ 0.16
LSM2-209ENST00000470083 MCM10Q7L590 875 aa16.06■□□□□ 0.16
LSM2-209ENST00000470083 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
LSM2-209ENST00000470083 RTF1Q92541 710 aaKnown RBP16.06■□□□□ 0.16
LSM2-209ENST00000470083 DPF2Q92785 391 aa16.06■□□□□ 0.16
LSM2-209ENST00000470083 NLRP3Q96P20 1036 aa16.06■□□□□ 0.16
LSM2-209ENST00000470083 ABCC4O15439 1325 aa16.05■□□□□ 0.16
LSM2-209ENST00000470083 YDJCA8MPS7 323 aa16.05■□□□□ 0.16
LSM2-209ENST00000470083 TTLL7Q6ZT98 887 aa16.05■□□□□ 0.16
LSM2-209ENST00000470083 SAMD7Q7Z3H4 446 aa16.05■□□□□ 0.16
LSM2-209ENST00000470083 ZNF34Q8IZ26 560 aa16.05■□□□□ 0.16
LSM2-209ENST00000470083 MPNDQ8N594 471 aa16.05■□□□□ 0.16
LSM2-209ENST00000470083 ADM5C9JUS6 153 aa16.04■□□□□ 0.16
LSM2-209ENST00000470083 BBOX1O75936 387 aa16.04■□□□□ 0.16
LSM2-209ENST00000470083 CC2D1BQ5T0F9 858 aaKnown RBP16.04■□□□□ 0.16
LSM2-209ENST00000470083 PPP1R42Q7Z4L9 355 aa16.04■□□□□ 0.16
LSM2-209ENST00000470083 SP8Q8IXZ3 490 aa16.04■□□□□ 0.16
LSM2-209ENST00000470083 RSPH6AQ9H0K4 717 aa16.04■□□□□ 0.16
LSM2-209ENST00000470083 EGFRP00533 1210 aa16.03■□□□□ 0.16
LSM2-209ENST00000470083 TBC1D10BQ4KMP7 808 aaPredicted RBP16.03■□□□□ 0.16
LSM2-209ENST00000470083 PARP10Q53GL7 1025 aa16.03■□□□□ 0.16
LSM2-209ENST00000470083 DCPSQ96C86 337 aaKnown RBP16.03■□□□□ 0.16
LSM2-209ENST00000470083 ZBTB3Q9H5J0 574 aa16.03■□□□□ 0.16
LSM2-209ENST00000470083 ZBTB12Q9Y330 459 aaPredicted RBP16.03■□□□□ 0.16
LSM2-209ENST00000470083 PER1O15534 1290 aaPredicted RBP16.02■□□□□ 0.16
LSM2-209ENST00000470083 SLC10A5Q5PT55 438 aa16.02■□□□□ 0.16
LSM2-209ENST00000470083 HDAC9Q9UKV0 1011 aa16.02■□□□□ 0.16
LSM2-209ENST00000470083 PSMD14O00487 310 aa16.01■□□□□ 0.15
LSM2-209ENST00000470083 GIGYF2Q6Y7W6 1299 aaKnown RBP16.01■□□□□ 0.15
LSM2-209ENST00000470083 RASAL3Q86YV0 1011 aa16.01■□□□□ 0.15
LSM2-209ENST00000470083 ZNF296Q8WUU4 475 aaPredicted RBP16.01■□□□□ 0.15
LSM2-209ENST00000470083 HTATSF1O43719 755 aaKnown RBP16■□□□□ 0.15
LSM2-209ENST00000470083 RPS12P25398 132 aaKnown RBP16■□□□□ 0.15
LSM2-209ENST00000470083 DCTN1Q14203 1278 aa16■□□□□ 0.15
LSM2-209ENST00000470083 TAF7Q15545 349 aaPredicted RBP16■□□□□ 0.15
LSM2-209ENST00000470083 SULF1Q8IWU6 871 aa16■□□□□ 0.15
LSM2-209ENST00000470083 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
LSM2-209ENST00000470083 FBXO46Q6PJ61 603 aaPredicted RBP15.99■□□□□ 0.15
LSM2-209ENST00000470083 UTP14AQ9BVJ6 771 aaKnown RBP15.99■□□□□ 0.15
LSM2-209ENST00000470083 HTTP42858 3142 aa15.99■□□□□ 0.15
LSM2-209ENST00000470083 MYL6BP14649 208 aa15.98■□□□□ 0.15
LSM2-209ENST00000470083 GRAPQ13588 217 aa15.98■□□□□ 0.15
LSM2-209ENST00000470083 NOM1Q5C9Z4 860 aaKnown RBP15.98■□□□□ 0.15
LSM2-209ENST00000470083 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
LSM2-209ENST00000470083 CDCA5Q96FF9 252 aa15.98■□□□□ 0.15
LSM2-209ENST00000470083 MIS18AQ9NYP9 233 aa15.98■□□□□ 0.15
LSM2-209ENST00000470083 GGA3Q9NZ52 723 aa15.98■□□□□ 0.15
LSM2-209ENST00000470083 NUP98P52948 1817 aa15.98■□□□□ 0.15
LSM2-209ENST00000470083 DUOX1Q9NRD9 1551 aa15.97■□□□□ 0.15
LSM2-209ENST00000470083 FKBP1BP68106 108 aa15.97■□□□□ 0.15
LSM2-209ENST00000470083 KIF4BQ2VIQ3 1234 aa15.97■□□□□ 0.15
LSM2-209ENST00000470083 RBM26Q5T8P6 1007 aaKnown RBP15.97■□□□□ 0.15
LSM2-209ENST00000470083 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
LSM2-209ENST00000470083 TMC4Q7Z404 712 aa15.97■□□□□ 0.15
LSM2-209ENST00000470083 AKAP11Q9UKA4 1901 aa15.97■□□□□ 0.15
LSM2-209ENST00000470083 LAMB4A4D0S4 1761 aa15.97■□□□□ 0.15
LSM2-209ENST00000470083 TBC1D8O95759 1140 aa15.96■□□□□ 0.15
LSM2-209ENST00000470083 FXR1P51114 621 aaKnown RBP eCLIP15.96■□□□□ 0.15
LSM2-209ENST00000470083 WASHC4Q2M389 1173 aa15.96■□□□□ 0.15
LSM2-209ENST00000470083 DBNDD1Q9H9R9 158 aa15.96■□□□□ 0.15
LSM2-209ENST00000470083 ERBB4Q15303 1308 aa15.95■□□□□ 0.14
LSM2-209ENST00000470083 GPR25O00155 361 aa15.95■□□□□ 0.14
LSM2-209ENST00000470083 PNISRQ8TF01 805 aaKnown RBP15.95■□□□□ 0.14
LSM2-209ENST00000470083 HCLS1P14317 486 aaPredicted RBP15.94■□□□□ 0.14
LSM2-209ENST00000470083 EIF4A1P60842 406 aaKnown RBP15.94■□□□□ 0.14
LSM2-209ENST00000470083 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
LSM2-209ENST00000470083 NUDCQ9Y266 331 aa15.94■□□□□ 0.14
LSM2-209ENST00000470083 RTL9Q8NET4 1388 aa15.94■□□□□ 0.14
LSM2-209ENST00000470083 ASTN2O75129 1339 aaPredicted RBP15.94■□□□□ 0.14
LSM2-209ENST00000470083 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
LSM2-209ENST00000470083 ECE2O60344 883 aa15.92■□□□□ 0.14
LSM2-209ENST00000470083 U2AF1L5P0DN76 240 aaPredicted RBP15.92■□□□□ 0.14
LSM2-209ENST00000470083 TM4SF4P48230 202 aa15.92■□□□□ 0.14
LSM2-209ENST00000470083 U2AF1Q01081 240 aaKnown RBP eCLIP15.92■□□□□ 0.14
LSM2-209ENST00000470083 LRP10Q7Z4F1 713 aa15.92■□□□□ 0.14
LSM2-209ENST00000470083 KCNQ5Q9NR82 932 aa15.92■□□□□ 0.14
LSM2-209ENST00000470083 CENPFP49454 3210 aa15.91■□□□□ 0.14
LSM2-209ENST00000470083 PAPPA2Q9BXP8 1791 aa15.91■□□□□ 0.14
LSM2-209ENST00000470083 BRCA2P51587 3418 aa15.91■□□□□ 0.14
LSM2-209ENST00000470083 VIL1P09327 827 aaKnown RBP15.91■□□□□ 0.14
LSM2-209ENST00000470083 POTEDQ86YR6 584 aa15.91■□□□□ 0.14
LSM2-209ENST00000470083 CFHR5Q9BXR6 569 aa15.91■□□□□ 0.14
LSM2-209ENST00000470083 NSFL1CQ9UNZ2 370 aaKnown RBP15.91■□□□□ 0.14
LSM2-209ENST00000470083 C6orf229H3BNL8 230 aa15.9■□□□□ 0.14
LSM2-209ENST00000470083 RIMBP2O15034 1052 aa15.9■□□□□ 0.14
LSM2-209ENST00000470083 FKTNO75072 461 aa15.9■□□□□ 0.14
LSM2-209ENST00000470083 ZNF280AP59817 542 aaPredicted RBP15.9■□□□□ 0.14
LSM2-209ENST00000470083 ANGEL2Q5VTE6 544 aaKnown RBP15.9■□□□□ 0.14
LSM2-209ENST00000470083 INTS3Q68E01 1043 aaKnown RBP15.9■□□□□ 0.14
LSM2-209ENST00000470083 NLRP10Q86W26 655 aa15.9■□□□□ 0.14
LSM2-209ENST00000470083 EYA3Q99504 573 aa15.9■□□□□ 0.14
LSM2-209ENST00000470083 POLLQ9UGP5 575 aa15.9■□□□□ 0.14
LSM2-209ENST00000470083 SH3TC1Q8TE82 1336 aa15.9■□□□□ 0.14
LSM2-209ENST00000470083 POTEFA5A3E0 1075 aa15.89■□□□□ 0.13
LSM2-209ENST00000470083 CNGB1Q14028 1251 aaPredicted RBP15.89■□□□□ 0.13
LSM2-209ENST00000470083 SCARF1Q14162 830 aa15.89■□□□□ 0.13
LSM2-209ENST00000470083 DOK7Q18PE1 504 aa15.89■□□□□ 0.13
LSM2-209ENST00000470083 HSP90AB3PQ58FF7 597 aa15.89■□□□□ 0.13
LSM2-209ENST00000470083 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.13
LSM2-209ENST00000470083 PITPNM2Q9BZ72 1349 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms