RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 GCC1Q96CN9 775 aa12.95□□□□□ -0.34
THBS3-206ENST00000469769 COPRSQ9NQ92 184 aa12.95□□□□□ -0.34
THBS3-206ENST00000469769 MMP10P09238 476 aa12.94□□□□□ -0.34
THBS3-206ENST00000469769 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
THBS3-206ENST00000469769 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
THBS3-206ENST00000469769 MSH5O43196 834 aa12.93□□□□□ -0.34
THBS3-206ENST00000469769 HCLS1P14317 486 aaPredicted RBP12.93□□□□□ -0.34
THBS3-206ENST00000469769 CRY2Q49AN0 593 aa12.93□□□□□ -0.34
THBS3-206ENST00000469769 CNBD1Q8NA66 436 aa12.93□□□□□ -0.34
THBS3-206ENST00000469769 ANKRD31Q8N7Z5 1873 aa12.93□□□□□ -0.34
THBS3-206ENST00000469769 FAM177BA6PVY3 158 aa12.92□□□□□ -0.34
THBS3-206ENST00000469769 NLRP3Q96P20 1036 aa12.92□□□□□ -0.34
THBS3-206ENST00000469769 MTFR1LQ9H019 292 aa12.92□□□□□ -0.34
THBS3-206ENST00000469769 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
THBS3-206ENST00000469769 TNRC6CQ9HCJ0 1690 aaKnown RBP12.92□□□□□ -0.34
THBS3-206ENST00000469769 RAB11FIP3O75154 756 aa12.91□□□□□ -0.34
THBS3-206ENST00000469769 R3HDM1Q15032 1099 aaKnown RBP12.91□□□□□ -0.34
THBS3-206ENST00000469769 FAM161AQ3B820 660 aa12.91□□□□□ -0.34
THBS3-206ENST00000469769 CCDC152Q4G0S7 254 aa12.91□□□□□ -0.34
THBS3-206ENST00000469769 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
THBS3-206ENST00000469769 SGIP1Q9BQI5 828 aa12.91□□□□□ -0.34
THBS3-206ENST00000469769 BRIP1Q9BX63 1249 aa12.91□□□□□ -0.34
THBS3-206ENST00000469769 GREM2Q9H772 168 aa12.91□□□□□ -0.34
THBS3-206ENST00000469769 KIF13BQ9NQT8 1826 aa12.9□□□□□ -0.34
THBS3-206ENST00000469769 CIAO1O76071 339 aa12.9□□□□□ -0.34
THBS3-206ENST00000469769 ITGA6P23229 1130 aa12.9□□□□□ -0.34
THBS3-206ENST00000469769 GTF2E1P29083 439 aaPredicted RBP12.9□□□□□ -0.34
THBS3-206ENST00000469769 HOXA10P31260 410 aaPredicted RBP12.9□□□□□ -0.34
THBS3-206ENST00000469769 ST5P78524 1137 aa12.9□□□□□ -0.34
THBS3-206ENST00000469769 NUCB1Q02818 461 aa12.9□□□□□ -0.34
THBS3-206ENST00000469769 IFIT5Q13325 482 aaKnown RBP12.9□□□□□ -0.34
THBS3-206ENST00000469769 CCDC57Q2TAC2 916 aa12.9□□□□□ -0.34
THBS3-206ENST00000469769 HSP90AB4PQ58FF6 505 aa12.9□□□□□ -0.34
THBS3-206ENST00000469769 MSL1Q68DK7 614 aa12.9□□□□□ -0.34
THBS3-206ENST00000469769 ANKRD18BA2A2Z9 1011 aa12.89□□□□□ -0.35
THBS3-206ENST00000469769 SURF6O75683 361 aaKnown RBP12.89□□□□□ -0.35
THBS3-206ENST00000469769 PDZRN3Q9UPQ7 1066 aa12.89□□□□□ -0.35
THBS3-206ENST00000469769 PA2G4Q9UQ80 394 aaKnown RBP12.89□□□□□ -0.35
THBS3-206ENST00000469769 CEP350Q5VT06 3117 aa12.89□□□□□ -0.35
THBS3-206ENST00000469769 EYA2O00167 538 aa12.88□□□□□ -0.35
THBS3-206ENST00000469769 SASH1O94885 1247 aa12.88□□□□□ -0.35
THBS3-206ENST00000469769 ATG9AQ7Z3C6 839 aa12.88□□□□□ -0.35
THBS3-206ENST00000469769 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
THBS3-206ENST00000469769 RIPOR2Q9Y4F9 1068 aa12.88□□□□□ -0.35
THBS3-206ENST00000469769 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
THBS3-206ENST00000469769 COL4A1P02462 1669 aa12.87□□□□□ -0.35
THBS3-206ENST00000469769 PDE6BP35913 854 aa12.87□□□□□ -0.35
THBS3-206ENST00000469769 IL15P40933 162 aaPredicted RBP12.87□□□□□ -0.35
THBS3-206ENST00000469769 CHD1LQ86WJ1 897 aa12.87□□□□□ -0.35
THBS3-206ENST00000469769 ERC1Q8IUD2 1116 aa12.87□□□□□ -0.35
THBS3-206ENST00000469769 CCDC24Q8N4L8 307 aa12.87□□□□□ -0.35
THBS3-206ENST00000469769 KLHDC4Q8TBB5 520 aa12.87□□□□□ -0.35
THBS3-206ENST00000469769 KIF1BPQ96EK5 621 aa12.87□□□□□ -0.35
THBS3-206ENST00000469769 CRAMP1Q96RY5 1269 aa12.87□□□□□ -0.35
THBS3-206ENST00000469769 CDC5LQ99459 802 aaKnown RBP12.87□□□□□ -0.35
THBS3-206ENST00000469769 SEC31BQ9NQW1 1179 aa12.87□□□□□ -0.35
THBS3-206ENST00000469769 TAF1P21675 1872 aa12.87□□□□□ -0.35
THBS3-206ENST00000469769 SRGNP10124 158 aa12.86□□□□□ -0.35
THBS3-206ENST00000469769 PTGER2P43116 358 aa12.86□□□□□ -0.35
THBS3-206ENST00000469769 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
THBS3-206ENST00000469769 RHPN1Q8TCX5 695 aa12.86□□□□□ -0.35
THBS3-206ENST00000469769 ZNF594Q96JF6 807 aaPredicted RBP12.86□□□□□ -0.35
THBS3-206ENST00000469769 LRRCC1Q9C099 1032 aa12.86□□□□□ -0.35
THBS3-206ENST00000469769 BSDC1Q9NW68 430 aaPredicted RBP12.86□□□□□ -0.35
THBS3-206ENST00000469769 CHMP3Q9Y3E7 222 aa12.86□□□□□ -0.35
THBS3-206ENST00000469769 NPHP1O15259 732 aa12.85□□□□□ -0.35
THBS3-206ENST00000469769 ZBTB7AO95365 584 aa12.85□□□□□ -0.35
THBS3-206ENST00000469769 RPS8P62241 208 aaKnown RBP12.85□□□□□ -0.35
THBS3-206ENST00000469769 LRRC24Q50LG9 513 aa12.85□□□□□ -0.35
THBS3-206ENST00000469769 ANKRD45Q5TZF3 282 aa12.85□□□□□ -0.35
THBS3-206ENST00000469769 VGLL2Q8N8G2 317 aa12.85□□□□□ -0.35
THBS3-206ENST00000469769 CCDC85AQ96PX6 553 aaPredicted RBP12.85□□□□□ -0.35
THBS3-206ENST00000469769 PUS3Q9BZE2 481 aaKnown RBP12.85□□□□□ -0.35
THBS3-206ENST00000469769 GPR108Q9NPR9 543 aa12.85□□□□□ -0.35
THBS3-206ENST00000469769 SALL3Q9BXA9 1300 aa12.85□□□□□ -0.35
THBS3-206ENST00000469769 COL11A2P13942 1736 aaPredicted RBP12.85□□□□□ -0.35
THBS3-206ENST00000469769 PSDA5PKW4 1024 aaPredicted RBP12.84□□□□□ -0.35
THBS3-206ENST00000469769 GRAPQ13588 217 aa12.84□□□□□ -0.35
THBS3-206ENST00000469769 LDHAL6AQ6ZMR3 332 aa12.84□□□□□ -0.35
THBS3-206ENST00000469769 DDX46Q7L014 1031 aaKnown RBP12.84□□□□□ -0.35
THBS3-206ENST00000469769 GRAPLQ8TC17 118 aaPredicted RBP12.84□□□□□ -0.35
THBS3-206ENST00000469769 CELF1Q92879 486 aaKnown RBP12.84□□□□□ -0.35
THBS3-206ENST00000469769 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.84□□□□□ -0.35
THBS3-206ENST00000469769 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
THBS3-206ENST00000469769 KIAA1551Q9HCM1 1747 aa12.83□□□□□ -0.36
THBS3-206ENST00000469769 BBOX1O75936 387 aa12.83□□□□□ -0.36
THBS3-206ENST00000469769 NPR1P16066 1061 aa12.83□□□□□ -0.36
THBS3-206ENST00000469769 PDE4AP27815 886 aa12.83□□□□□ -0.36
THBS3-206ENST00000469769 POLD1P28340 1107 aa12.83□□□□□ -0.36
THBS3-206ENST00000469769 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.36
THBS3-206ENST00000469769 STYK1Q6J9G0 422 aa12.83□□□□□ -0.36
THBS3-206ENST00000469769 ANKRD18AQ8IVF6 992 aa12.83□□□□□ -0.36
THBS3-206ENST00000469769 MASTLQ96GX5 879 aa12.83□□□□□ -0.36
THBS3-206ENST00000469769 RBM17Q96I25 401 aaKnown RBP12.83□□□□□ -0.36
THBS3-206ENST00000469769 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
THBS3-206ENST00000469769 A0A1B0GUL6 1792 aa12.83□□□□□ -0.36
THBS3-206ENST00000469769 MROH5Q6ZUA9 1318 aa12.83□□□□□ -0.36
THBS3-206ENST00000469769 TGFB2P61812 414 aa12.82□□□□□ -0.36
THBS3-206ENST00000469769 TAF7LQ5H9L4 462 aa12.82□□□□□ -0.36
THBS3-206ENST00000469769 TMC4Q7Z404 712 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms