RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 PRDM2Q13029 1718 aa8.91□□□□□ -0.98
VPS8-219ENST00000469479 TOP2AP11388 1531 aaKnown RBP8.91□□□□□ -0.98
VPS8-219ENST00000469479 PALM3A6NDB9 673 aaPredicted RBP8.91□□□□□ -0.98
VPS8-219ENST00000469479 IRAK1P51617 712 aa8.91□□□□□ -0.98
VPS8-219ENST00000469479 CCINQ13939 588 aa8.91□□□□□ -0.98
VPS8-219ENST00000469479 IER5Q5VY09 327 aa8.91□□□□□ -0.98
VPS8-219ENST00000469479 MSL1Q68DK7 614 aa8.91□□□□□ -0.98
VPS8-219ENST00000469479 GAS2L2Q8NHY3 880 aa8.91□□□□□ -0.98
VPS8-219ENST00000469479 COG6Q9Y2V7 657 aa8.91□□□□□ -0.98
VPS8-219ENST00000469479 RBM19Q9Y4C8 960 aaKnown RBP8.91□□□□□ -0.98
VPS8-219ENST00000469479 FRRS1LQ9P0K9 344 aa8.9□□□□□ -0.98
VPS8-219ENST00000469479 NAGPAQ9UK23 515 aa8.9□□□□□ -0.98
VPS8-219ENST00000469479 KIAA1024Q9UPX6 916 aa8.9□□□□□ -0.98
VPS8-219ENST00000469479 IREB2P48200 963 aaKnown RBP8.89□□□□□ -0.99
VPS8-219ENST00000469479 CLDN10P78369 228 aa8.89□□□□□ -0.99
VPS8-219ENST00000469479 IGF2-ASQ6U949 168 aa8.89□□□□□ -0.99
VPS8-219ENST00000469479 FAM35AQ86V20 835 aa8.89□□□□□ -0.99
VPS8-219ENST00000469479 DNMBPQ6XZF7 1577 aa8.89□□□□□ -0.99
VPS8-219ENST00000469479 CLASP1Q7Z460 1538 aa8.89□□□□□ -0.99
VPS8-219ENST00000469479 ATAD2Q6PL18 1390 aa8.88□□□□□ -0.99
VPS8-219ENST00000469479 WDR97A6NE52 1622 aa8.88□□□□□ -0.99
VPS8-219ENST00000469479 SYNJ1O43426 1573 aa8.88□□□□□ -0.99
VPS8-219ENST00000469479 USP17L3A6NCW0 530 aa8.88□□□□□ -0.99
VPS8-219ENST00000469479 USP17L4A6NCW7 530 aa8.88□□□□□ -0.99
VPS8-219ENST00000469479 NFKB1P19838 968 aa8.88□□□□□ -0.99
VPS8-219ENST00000469479 NOS3P29474 1203 aa8.88□□□□□ -0.99
VPS8-219ENST00000469479 USP17L2Q6R6M4 530 aa8.88□□□□□ -0.99
VPS8-219ENST00000469479 USP17L1Q7RTZ2 530 aa8.88□□□□□ -0.99
VPS8-219ENST00000469479 OGFOD1Q8N543 542 aa8.88□□□□□ -0.99
VPS8-219ENST00000469479 C2orf49Q9BVC5 232 aaPredicted RBP8.88□□□□□ -0.99
VPS8-219ENST00000469479 AQRO60306 1485 aaKnown RBP eCLIP8.88□□□□□ -0.995e-6■■□□□ 14.3
VPS8-219ENST00000469479 C21orf2O43822 256 aa8.87□□□□□ -0.99
VPS8-219ENST00000469479 MAP3K6O95382 1288 aa8.87□□□□□ -0.99
VPS8-219ENST00000469479 EPB42P16452 691 aa8.87□□□□□ -0.99
VPS8-219ENST00000469479 WFDC8Q8IUA0 241 aa8.87□□□□□ -0.99
VPS8-219ENST00000469479 TSEN2Q8NCE0 465 aaKnown RBP8.87□□□□□ -0.99
VPS8-219ENST00000469479 TTC9Q92623 222 aa8.87□□□□□ -0.99
VPS8-219ENST00000469479 TARBP1Q13395 1621 aaKnown RBP8.87□□□□□ -0.99
VPS8-219ENST00000469479 PRR23CQ6ZRP0 262 aa8.86□□□□□ -0.99
VPS8-219ENST00000469479 SIX5Q8N196 739 aa8.86□□□□□ -0.99
VPS8-219ENST00000469479 KRTAP4-9Q9BYQ8 210 aa8.86□□□□□ -0.99
VPS8-219ENST00000469479 RNF114Q9Y508 228 aa8.86□□□□□ -0.99
VPS8-219ENST00000469479 TGFBR3LH3BV60 316 aa8.85□□□□□ -0.99
VPS8-219ENST00000469479 CPB1P15086 417 aa8.85□□□□□ -0.99
VPS8-219ENST00000469479 GRIK5Q16478 980 aa8.85□□□□□ -0.99
VPS8-219ENST00000469479 LPIN3Q9BQK8 851 aa8.85□□□□□ -0.99
VPS8-219ENST00000469479 C11orf16Q9NQ32 467 aa8.85□□□□□ -0.99
VPS8-219ENST00000469479 MKRN1Q9UHC7 482 aaKnown RBP8.85□□□□□ -0.99
VPS8-219ENST00000469479 MAGI1Q96QZ7 1491 aaPredicted RBP8.84□□□□□ -0.99
VPS8-219ENST00000469479 TAL1P17542 331 aaPredicted RBP8.84□□□□□ -0.99
VPS8-219ENST00000469479 RTN1Q16799 776 aa8.84□□□□□ -0.99
VPS8-219ENST00000469479 ELMSAN1Q6PJG2 1045 aa8.84□□□□□ -0.99
VPS8-219ENST00000469479 TRPM4Q8TD43 1214 aa8.84□□□□□ -0.99
VPS8-219ENST00000469479 CHMP7Q8WUX9 453 aaPredicted RBP8.84□□□□□ -0.99
VPS8-219ENST00000469479 MEGF10Q96KG7 1140 aa8.84□□□□□ -0.99
VPS8-219ENST00000469479 GAPVD1Q14C86 1478 aa8.83□□□□□ -1
VPS8-219ENST00000469479 ATP9BO43861 1147 aa8.83□□□□□ -1
VPS8-219ENST00000469479 ARID4AP29374 1257 aaPredicted RBP8.83□□□□□ -1
VPS8-219ENST00000469479 PERM1Q5SV97 790 aa8.83□□□□□ -1
VPS8-219ENST00000469479 SCG3Q8WXD2 468 aaKnown RBP8.83□□□□□ -1
VPS8-219ENST00000469479 NGLY1Q96IV0 654 aa8.83□□□□□ -1
VPS8-219ENST00000469479 SSTR4P31391 388 aa8.82□□□□□ -1
VPS8-219ENST00000469479 DMGDHQ9UI17 866 aaKnown RBP8.82□□□□□ -1
VPS8-219ENST00000469479 POLA1P09884 1462 aaPredicted RBP8.82□□□□□ -1
VPS8-219ENST00000469479 DHX32Q7L7V1 743 aaKnown RBP8.81□□□□□ -1
VPS8-219ENST00000469479 DZIP1LQ8IYY4 767 aaKnown RBP8.81□□□□□ -1
VPS8-219ENST00000469479 ZNF594Q96JF6 807 aaPredicted RBP8.81□□□□□ -1
VPS8-219ENST00000469479 AKTIPQ9H8T0 292 aa8.81□□□□□ -1
VPS8-219ENST00000469479 SNAPC4Q5SXM2 1469 aa8.81□□□□□ -1
VPS8-219ENST00000469479 DLL1O00548 723 aa8.8□□□□□ -1
VPS8-219ENST00000469479 RAD21O60216 631 aa8.8□□□□□ -1
VPS8-219ENST00000469479 DKK1O94907 266 aa8.8□□□□□ -1
VPS8-219ENST00000469479 FSTP19883 344 aa8.8□□□□□ -1
VPS8-219ENST00000469479 GPLD1P80108 840 aa8.8□□□□□ -1
VPS8-219ENST00000469479 TMEM130Q8N3G9 435 aa8.8□□□□□ -1
VPS8-219ENST00000469479 SYNJ2O15056 1496 aa8.8□□□□□ -1
VPS8-219ENST00000469479 GRIN2BQ13224 1484 aa8.79□□□□□ -1
VPS8-219ENST00000469479 ZBTB42B2RXF5 422 aa8.79□□□□□ -1
VPS8-219ENST00000469479 DEAF1O75398 565 aaPredicted RBP8.79□□□□□ -1
VPS8-219ENST00000469479 SEC13P55735 322 aa8.79□□□□□ -1
VPS8-219ENST00000469479 DCAF11Q8TEB1 546 aa8.79□□□□□ -1
VPS8-219ENST00000469479 MRPL18Q9H0U6 180 aaKnown RBP8.79□□□□□ -1
VPS8-219ENST00000469479 BCS1LQ9Y276 419 aa8.79□□□□□ -1
VPS8-219ENST00000469479 SOGA1O94964 1423 aa8.79□□□□□ -1
VPS8-219ENST00000469479 TDRD9Q8NDG6 1382 aaKnown RBP8.78□□□□□ -1
VPS8-219ENST00000469479 INPP5BP32019 993 aa8.78□□□□□ -1
VPS8-219ENST00000469479 ZFATQ9P243 1243 aa8.78□□□□□ -1
VPS8-219ENST00000469479 CCDC88BA6NC98 1476 aa8.77□□□□□ -1
VPS8-219ENST00000469479 IDH3AP50213 366 aa8.77□□□□□ -1.01
VPS8-219ENST00000469479 HDGFL1Q5TGJ6 251 aa8.77□□□□□ -1.01
VPS8-219ENST00000469479 ADAMTS19Q8TE59 1207 aa8.77□□□□□ -1.01
VPS8-219ENST00000469479 UCN2Q96RP3 112 aa8.77□□□□□ -1.01
VPS8-219ENST00000469479 SRA1Q9HD15 236 aaKnown RBP8.77□□□□□ -1.01
VPS8-219ENST00000469479 GSC2O15499 205 aa8.76□□□□□ -1.01
VPS8-219ENST00000469479 RARAP10276 462 aa8.76□□□□□ -1.01
VPS8-219ENST00000469479 RASA1P20936 1047 aa8.76□□□□□ -1.01
VPS8-219ENST00000469479 TARSP26639 723 aaKnown RBP8.76□□□□□ -1.01
VPS8-219ENST00000469479 CD97P48960 835 aa8.76□□□□□ -1.01
VPS8-219ENST00000469479 ARSDP51689 593 aa8.76□□□□□ -1.01
VPS8-219ENST00000469479 NRLP54845 237 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms