RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 EGFRP00533 1210 aa14.96□□□□□ -0.01
NEDD9-207ENST00000468612 SUSD4Q5VX71 490 aa14.96□□□□□ -0.01
NEDD9-207ENST00000468612 DPP8Q6V1X1 898 aaPredicted RBP14.96□□□□□ -0.01
NEDD9-207ENST00000468612 TMX4Q9H1E5 349 aaPredicted RBP14.96□□□□□ -0.01
NEDD9-207ENST00000468612 NUP98P52948 1817 aa14.96□□□□□ -0.01
NEDD9-207ENST00000468612 BRCA2P51587 3418 aa14.96□□□□□ -0.01
NEDD9-207ENST00000468612 MAP3K15Q6ZN16 1313 aa14.95□□□□□ -0.02
NEDD9-207ENST00000468612 NTSR2O95665 410 aa14.95□□□□□ -0.02
NEDD9-207ENST00000468612 TBC1D10BQ4KMP7 808 aaPredicted RBP14.95□□□□□ -0.02
NEDD9-207ENST00000468612 ZBTB12Q9Y330 459 aaPredicted RBP14.95□□□□□ -0.02
NEDD9-207ENST00000468612 ABCC4O15439 1325 aa14.94□□□□□ -0.02
NEDD9-207ENST00000468612 GPTP24298 496 aa14.94□□□□□ -0.02
NEDD9-207ENST00000468612 NOM1Q5C9Z4 860 aaKnown RBP14.94□□□□□ -0.02
NEDD9-207ENST00000468612 DCPSQ96C86 337 aaKnown RBP14.94□□□□□ -0.02
NEDD9-207ENST00000468612 COL3A1P02461 1466 aaPredicted RBP14.94□□□□□ -0.02
NEDD9-207ENST00000468612 TBC1D8O95759 1140 aa14.93□□□□□ -0.02
NEDD9-207ENST00000468612 SP8Q8IXZ3 490 aa14.93□□□□□ -0.02
NEDD9-207ENST00000468612 ZNF34Q8IZ26 560 aa14.93□□□□□ -0.02
NEDD9-207ENST00000468612 MPNDQ8N594 471 aa14.93□□□□□ -0.02
NEDD9-207ENST00000468612 A0A0C4DFX4 3053 aa14.93□□□□□ -0.02
NEDD9-207ENST00000468612 GPR25O00155 361 aa14.92□□□□□ -0.02
NEDD9-207ENST00000468612 PSMD14O00487 310 aa14.92□□□□□ -0.02
NEDD9-207ENST00000468612 BBOX1O75936 387 aa14.92□□□□□ -0.02
NEDD9-207ENST00000468612 TTLL7Q6ZT98 887 aa14.92□□□□□ -0.02
NEDD9-207ENST00000468612 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
NEDD9-207ENST00000468612 DUOX1Q9NRD9 1551 aa14.91□□□□□ -0.02
NEDD9-207ENST00000468612 SLC10A5Q5PT55 438 aa14.91□□□□□ -0.02
NEDD9-207ENST00000468612 NGEFQ8N5V2 710 aa14.91□□□□□ -0.02
NEDD9-207ENST00000468612 CDCA5Q96FF9 252 aa14.91□□□□□ -0.02
NEDD9-207ENST00000468612 PHACTR3Q96KR7 559 aa14.91□□□□□ -0.02
NEDD9-207ENST00000468612 POTEFA5A3E0 1075 aa14.9□□□□□ -0.02
NEDD9-207ENST00000468612 U2SURPO15042 1029 aaKnown RBP14.9□□□□□ -0.02
NEDD9-207ENST00000468612 RPS12P25398 132 aaKnown RBP14.9□□□□□ -0.02
NEDD9-207ENST00000468612 KIF6Q6ZMV9 814 aa14.9□□□□□ -0.02
NEDD9-207ENST00000468612 LAMB4A4D0S4 1761 aa14.9□□□□□ -0.02
NEDD9-207ENST00000468612 FKBP1BP68106 108 aa14.89□□□□□ -0.03
NEDD9-207ENST00000468612 RBM26Q5T8P6 1007 aaKnown RBP14.89□□□□□ -0.03
NEDD9-207ENST00000468612 PPP1R42Q7Z4L9 355 aa14.89□□□□□ -0.03
NEDD9-207ENST00000468612 SULF1Q8IWU6 871 aa14.89□□□□□ -0.03
NEDD9-207ENST00000468612 ZBTB3Q9H5J0 574 aa14.89□□□□□ -0.03
NEDD9-207ENST00000468612 GGA3Q9NZ52 723 aa14.89□□□□□ -0.03
NEDD9-207ENST00000468612 PAPPA2Q9BXP8 1791 aa14.88□□□□□ -0.03
NEDD9-207ENST00000468612 TM4SF4P48230 202 aa14.88□□□□□ -0.03
NEDD9-207ENST00000468612 KIF4BQ2VIQ3 1234 aa14.88□□□□□ -0.03
NEDD9-207ENST00000468612 GIGYF2Q6Y7W6 1299 aaKnown RBP14.88□□□□□ -0.03
NEDD9-207ENST00000468612 MCM10Q7L590 875 aa14.88□□□□□ -0.03
NEDD9-207ENST00000468612 ASTN2O75129 1339 aaPredicted RBP14.88□□□□□ -0.03
NEDD9-207ENST00000468612 FKTNO75072 461 aa14.87□□□□□ -0.03
NEDD9-207ENST00000468612 HSPA5P11021 654 aaKnown RBP14.87□□□□□ -0.03
NEDD9-207ENST00000468612 PARP10Q53GL7 1025 aa14.87□□□□□ -0.03
NEDD9-207ENST00000468612 INTS3Q68E01 1043 aaKnown RBP14.87□□□□□ -0.03
NEDD9-207ENST00000468612 CFHR5Q9BXR6 569 aa14.87□□□□□ -0.03
NEDD9-207ENST00000468612 COLQQ9Y215 455 aaPredicted RBP14.87□□□□□ -0.03
NEDD9-207ENST00000468612 RTL9Q8NET4 1388 aa14.86□□□□□ -0.03
NEDD9-207ENST00000468612 DLL1O00548 723 aa14.86□□□□□ -0.03
NEDD9-207ENST00000468612 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
NEDD9-207ENST00000468612 RSPH6AQ9H0K4 717 aa14.86□□□□□ -0.03
NEDD9-207ENST00000468612 R3HDMLQ9H3Y0 253 aa14.86□□□□□ -0.03
NEDD9-207ENST00000468612 DBNDD1Q9H9R9 158 aa14.86□□□□□ -0.03
NEDD9-207ENST00000468612 TRIOBPQ9H2D6 2365 aa14.86□□□□□ -0.03
NEDD9-207ENST00000468612 KIAA0100Q14667 2235 aaKnown RBP14.86□□□□□ -0.03
NEDD9-207ENST00000468612 LAMB2P55268 1798 aa14.85□□□□□ -0.03
NEDD9-207ENST00000468612 ANKRD36CQ5JPF3 1778 aa14.85□□□□□ -0.03
NEDD9-207ENST00000468612 RBBP6Q7Z6E9 1792 aaKnown RBP14.85□□□□□ -0.03
NEDD9-207ENST00000468612 EIF4G2P78344 907 aaKnown RBP eCLIP14.85□□□□□ -0.03
NEDD9-207ENST00000468612 GRAPQ13588 217 aa14.85□□□□□ -0.03
NEDD9-207ENST00000468612 GRAPLQ8TC17 118 aaPredicted RBP14.85□□□□□ -0.03
NEDD9-207ENST00000468612 RTF1Q92541 710 aaKnown RBP14.85□□□□□ -0.03
NEDD9-207ENST00000468612 UTP14AQ9BVJ6 771 aaKnown RBP14.85□□□□□ -0.03
NEDD9-207ENST00000468612 KCNQ5Q9NR82 932 aa14.85□□□□□ -0.03
NEDD9-207ENST00000468612 RRP7AQ9Y3A4 280 aaKnown RBP14.85□□□□□ -0.03
NEDD9-207ENST00000468612 LRRC37AA6NMS7 1700 aa14.85□□□□□ -0.03
NEDD9-207ENST00000468612 RANBP2P49792 3224 aaKnown RBP14.85□□□□□ -0.03
NEDD9-207ENST00000468612 COL6A3P12111 3177 aa14.84□□□□□ -0.03
NEDD9-207ENST00000468612 DCTN1Q14203 1278 aa14.84□□□□□ -0.03
NEDD9-207ENST00000468612 WASHC4Q2M389 1173 aa14.84□□□□□ -0.03
NEDD9-207ENST00000468612 MOB2Q70IA6 237 aa14.84□□□□□ -0.03
NEDD9-207ENST00000468612 MYL6BP14649 208 aa14.83□□□□□ -0.04
NEDD9-207ENST00000468612 TAF7Q15545 349 aaPredicted RBP14.83□□□□□ -0.04
NEDD9-207ENST00000468612 ANGEL2Q5VTE6 544 aaKnown RBP14.83□□□□□ -0.04
NEDD9-207ENST00000468612 DDX46Q7L014 1031 aaKnown RBP14.83□□□□□ -0.04
NEDD9-207ENST00000468612 TMC4Q7Z404 712 aa14.83□□□□□ -0.04
NEDD9-207ENST00000468612 TIMELESSQ9UNS1 1208 aa14.83□□□□□ -0.04
NEDD9-207ENST00000468612 CEP290O15078 2479 aa14.82□□□□□ -0.04
NEDD9-207ENST00000468612 UBE2Q2LH0YL09 131 aa14.82□□□□□ -0.04
NEDD9-207ENST00000468612 HTATSF1O43719 755 aaKnown RBP14.82□□□□□ -0.04
NEDD9-207ENST00000468612 ECE2O60344 883 aa14.82□□□□□ -0.04
NEDD9-207ENST00000468612 VIL1P09327 827 aaKnown RBP14.82□□□□□ -0.04
NEDD9-207ENST00000468612 HCLS1P14317 486 aaPredicted RBP14.82□□□□□ -0.04
NEDD9-207ENST00000468612 ZNF280AP59817 542 aaPredicted RBP14.82□□□□□ -0.04
NEDD9-207ENST00000468612 SCARF1Q14162 830 aa14.82□□□□□ -0.04
NEDD9-207ENST00000468612 MIS18AQ9NYP9 233 aa14.82□□□□□ -0.04
NEDD9-207ENST00000468612 TAF1P21675 1872 aa14.81□□□□□ -0.04
NEDD9-207ENST00000468612 CUL9Q8IWT3 2517 aa14.81□□□□□ -0.04
NEDD9-207ENST00000468612 RIMBP2O15034 1052 aa14.81□□□□□ -0.04
NEDD9-207ENST00000468612 PER1O15534 1290 aaPredicted RBP14.81□□□□□ -0.04
NEDD9-207ENST00000468612 EN2P19622 333 aaPredicted RBP14.81□□□□□ -0.04
NEDD9-207ENST00000468612 CC2D1BQ5T0F9 858 aaKnown RBP14.81□□□□□ -0.04
NEDD9-207ENST00000468612 OTOP1Q7RTM1 612 aa14.81□□□□□ -0.04
NEDD9-207ENST00000468612 POLLQ9UGP5 575 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms