RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 ORC1Q13415 861 aa8.37□□□□□ -1.07
GAPVD1-211ENST00000467707 TMC4Q7Z404 712 aa8.37□□□□□ -1.07
GAPVD1-211ENST00000467707 GSX2Q9BZM3 304 aa8.37□□□□□ -1.07
GAPVD1-211ENST00000467707 MRS2Q9HD23 443 aa8.37□□□□□ -1.07
GAPVD1-211ENST00000467707 GIPC1O14908 333 aa8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 BNIP3LO60238 219 aa8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 GNA15P30679 374 aa8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 DAB2P98082 770 aa8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 TAGLNQ01995 201 aaKnown RBP8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 SFSWAPQ12872 951 aaKnown RBP8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 PNMA5Q96PV4 448 aa8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 DUSP9Q99956 384 aaKnown RBP8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 ZFYVE28Q9HCC9 887 aa8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 TMEM63CQ9P1W3 806 aa8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 PARP2Q9UGN5 583 aa8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 SPG7Q9UQ90 795 aa8.36□□□□□ -1.07
GAPVD1-211ENST00000467707 NANOS1Q8WY41 292 aaKnown RBP8.35□□□□□ -1.07
GAPVD1-211ENST00000467707 CUEDC1Q9NWM3 386 aaPredicted RBP8.35□□□□□ -1.07
GAPVD1-211ENST00000467707 SORBS3O60504 671 aa8.34□□□□□ -1.07
GAPVD1-211ENST00000467707 PPFIA3O75145 1194 aa8.34□□□□□ -1.07
GAPVD1-211ENST00000467707 MAP3K6O95382 1288 aa8.34□□□□□ -1.07
GAPVD1-211ENST00000467707 SOX18P35713 384 aa8.34□□□□□ -1.07
GAPVD1-211ENST00000467707 SPEM2Q0P670 501 aa8.34□□□□□ -1.07
GAPVD1-211ENST00000467707 PSMD2Q13200 908 aa8.34□□□□□ -1.07
GAPVD1-211ENST00000467707 MRPL58Q14197 206 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-211ENST00000467707 GTPBP3Q969Y2 492 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-211ENST00000467707 NLRP2Q9NX02 1062 aa8.34□□□□□ -1.07
GAPVD1-211ENST00000467707 FOXD3Q9UJU5 478 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-211ENST00000467707 RARAP10276 462 aa8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 HOXD8P13378 290 aaPredicted RBP8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 FGFR3P22607 806 aa8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 CES1P23141 567 aa8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 SV2AQ7L0J3 742 aa8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 NPAS3Q8IXF0 933 aa8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 OR13H1Q8NG92 308 aa8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 CCDC74AQ96AQ1 378 aa8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 ABHD17AQ96GS6 310 aa8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 SRCIN1Q9C0H9 1055 aa8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 WWC3Q9ULE0 1092 aa8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.33□□□□□ -1.08
GAPVD1-211ENST00000467707 PHF20L1A8MW92 1017 aa8.32□□□□□ -1.08
GAPVD1-211ENST00000467707 SASH3O75995 380 aa8.32□□□□□ -1.08
GAPVD1-211ENST00000467707 PSAPP07602 524 aa8.32□□□□□ -1.08
GAPVD1-211ENST00000467707 EDN3P14138 238 aa8.32□□□□□ -1.08
GAPVD1-211ENST00000467707 GALNT12Q8IXK2 581 aa8.32□□□□□ -1.08
GAPVD1-211ENST00000467707 CHRDQ9H2X0 955 aa8.32□□□□□ -1.08
GAPVD1-211ENST00000467707 TARSP26639 723 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-211ENST00000467707 VEGFBP49765 207 aa8.31□□□□□ -1.08
GAPVD1-211ENST00000467707 PCSK7Q16549 785 aa8.31□□□□□ -1.08
GAPVD1-211ENST00000467707 C1orf127Q8N9H9 656 aa8.31□□□□□ -1.08
GAPVD1-211ENST00000467707 AVENQ9NQS1 362 aaPredicted RBP8.31□□□□□ -1.08
GAPVD1-211ENST00000467707 STRN4Q9NRL3 753 aa8.31□□□□□ -1.08
GAPVD1-211ENST00000467707 IGSF5Q9NSI5 407 aa8.31□□□□□ -1.08
GAPVD1-211ENST00000467707 TLR7Q9NYK1 1049 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-211ENST00000467707 AK5Q9Y6K8 562 aa8.31□□□□□ -1.08
GAPVD1-211ENST00000467707 CDC14CA4D256 554 aa8.3□□□□□ -1.08
GAPVD1-211ENST00000467707 TCF3P15923 654 aa8.3□□□□□ -1.08
GAPVD1-211ENST00000467707 NFKB1P19838 968 aa8.3□□□□□ -1.08
GAPVD1-211ENST00000467707 CD33P20138 364 aa8.3□□□□□ -1.08
GAPVD1-211ENST00000467707 PLAURQ03405 335 aa8.3□□□□□ -1.08
GAPVD1-211ENST00000467707 CNTN3Q9P232 1028 aa8.3□□□□□ -1.08
GAPVD1-211ENST00000467707 MMP20O60882 483 aa8.29□□□□□ -1.08
GAPVD1-211ENST00000467707 RECKO95980 971 aa8.29□□□□□ -1.08
GAPVD1-211ENST00000467707 EIF4BP23588 611 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-211ENST00000467707 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.29□□□□□ -1.08
GAPVD1-211ENST00000467707 KRT25Q7Z3Z0 450 aa8.29□□□□□ -1.08
GAPVD1-211ENST00000467707 VWA5B2Q8N398 1253 aa8.29□□□□□ -1.08
GAPVD1-211ENST00000467707 SETDB2Q96T68 719 aa8.29□□□□□ -1.08
GAPVD1-211ENST00000467707 ZFATQ9P243 1243 aa8.29□□□□□ -1.08
GAPVD1-211ENST00000467707 VTI1BQ9UEU0 232 aa8.29□□□□□ -1.08
GAPVD1-211ENST00000467707 EREGO14944 169 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 NRLP54845 237 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 HYAL2Q12891 473 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 TSNAXIP1Q2TAA8 658 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 USPL1Q5W0Q7 1092 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 BHMTQ93088 406 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 CRELD1Q96HD1 420 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 NPHS2Q9NP85 383 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 PPP4R2Q9NY27 417 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 NXF1Q9UBU9 619 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 PRR12Q9ULL5 1215 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 NSFL1CQ9UNZ2 370 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 TRAK1Q9UPV9 953 aa8.28□□□□□ -1.08
GAPVD1-211ENST00000467707 SCAMP3O14828 347 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-211ENST00000467707 KIF4AO95239 1232 aa8.27□□□□□ -1.09
GAPVD1-211ENST00000467707 ZNF468Q5VIY5 522 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-211ENST00000467707 KIAA0319Q5VV43 1072 aa8.27□□□□□ -1.09
GAPVD1-211ENST00000467707 DHX32Q7L7V1 743 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-211ENST00000467707 C12orf49Q9H741 205 aa8.27□□□□□ -1.09
GAPVD1-211ENST00000467707 FAM8A1Q9UBU6 413 aa8.27□□□□□ -1.09
GAPVD1-211ENST00000467707 SALL4Q9UJQ4 1053 aa8.27□□□□□ -1.09
GAPVD1-211ENST00000467707 HCN2Q9UL51 889 aa8.27□□□□□ -1.09
GAPVD1-211ENST00000467707 LCE2BO14633 110 aa8.26□□□□□ -1.09
GAPVD1-211ENST00000467707 SIN3BO75182 1162 aa8.26□□□□□ -1.09
GAPVD1-211ENST00000467707 BMP4P12644 408 aa8.26□□□□□ -1.09
GAPVD1-211ENST00000467707 NCAPG2Q86XI2 1143 aa8.26□□□□□ -1.09
GAPVD1-211ENST00000467707 TRPM4Q8TD43 1214 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms