RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 H7C1D1 291 aa8.72□□□□□ -1.01
PTPRE-206ENST00000467366 PPEF1O14829 653 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-206ENST00000467366 GTF2E1P29083 439 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-206ENST00000467366 HOXA10P31260 410 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-206ENST00000467366 GLIPR1L2Q4G1C9 344 aa8.72□□□□□ -1.01
PTPRE-206ENST00000467366 TBC1D10BQ4KMP7 808 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-206ENST00000467366 ZNF790Q6PG37 636 aa8.72□□□□□ -1.01
PTPRE-206ENST00000467366 NUTM1Q86Y26 1132 aa8.72□□□□□ -1.01
PTPRE-206ENST00000467366 ZNF652Q9Y2D9 606 aa8.72□□□□□ -1.01
PTPRE-206ENST00000467366 ZBTB12Q9Y330 459 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-206ENST00000467366 CUL9Q8IWT3 2517 aa8.72□□□□□ -1.01
PTPRE-206ENST00000467366 YDJCA8MPS7 323 aa8.71□□□□□ -1.02
PTPRE-206ENST00000467366 TM4SF4P48230 202 aa8.71□□□□□ -1.02
PTPRE-206ENST00000467366 TNIP1Q15025 636 aa8.71□□□□□ -1.02
PTPRE-206ENST00000467366 HLFQ16534 295 aa8.71□□□□□ -1.02
PTPRE-206ENST00000467366 MTHFSDQ2M296 383 aaKnown RBP8.71□□□□□ -1.02
PTPRE-206ENST00000467366 RPGRQ92834 1020 aaKnown RBP8.71□□□□□ -1.02
PTPRE-206ENST00000467366 DCPSQ96C86 337 aaKnown RBP8.71□□□□□ -1.02
PTPRE-206ENST00000467366 VPS33BQ9H267 617 aa8.71□□□□□ -1.02
PTPRE-206ENST00000467366 TRIM17Q9Y577 477 aa8.71□□□□□ -1.02
PTPRE-206ENST00000467366 USP16Q9Y5T5 823 aa8.71□□□□□ -1.02
PTPRE-206ENST00000467366 TRIOBPQ9H2D6 2365 aa8.71□□□□□ -1.02
PTPRE-206ENST00000467366 PRAMEF22A3QJZ6 481 aa8.7□□□□□ -1.02
PTPRE-206ENST00000467366 OTOP1Q7RTM1 612 aa8.7□□□□□ -1.02
PTPRE-206ENST00000467366 CDCA5Q96FF9 252 aa8.7□□□□□ -1.02
PTPRE-206ENST00000467366 CRAMP1Q96RY5 1269 aa8.7□□□□□ -1.02
PTPRE-206ENST00000467366 COL25A1Q9BXS0 654 aaPredicted RBP8.7□□□□□ -1.02
PTPRE-206ENST00000467366 KIF7Q2M1P5 1343 aa8.7□□□□□ -1.02
PTPRE-206ENST00000467366 NUP98P52948 1817 aa8.69□□□□□ -1.02
PTPRE-206ENST00000467366 HMGB1P09429 215 aaKnown RBP8.69□□□□□ -1.02
PTPRE-206ENST00000467366 IL13P35225 146 aa8.69□□□□□ -1.02
PTPRE-206ENST00000467366 KIAA2012Q0VF49 1180 aa8.69□□□□□ -1.02
PTPRE-206ENST00000467366 RBM26Q5T8P6 1007 aaKnown RBP8.69□□□□□ -1.02
PTPRE-206ENST00000467366 MOB2Q70IA6 237 aa8.69□□□□□ -1.02
PTPRE-206ENST00000467366 RBM17Q96I25 401 aaKnown RBP8.69□□□□□ -1.02
PTPRE-206ENST00000467366 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
PTPRE-206ENST00000467366 CFHR5Q9BXR6 569 aa8.69□□□□□ -1.02
PTPRE-206ENST00000467366 RTFDC1Q9BY42 306 aaPredicted RBP8.69□□□□□ -1.02
PTPRE-206ENST00000467366 ASTN2O75129 1339 aaPredicted RBP8.69□□□□□ -1.02
PTPRE-206ENST00000467366 KCNQ3O43525 872 aa8.68□□□□□ -1.02
PTPRE-206ENST00000467366 HMOX1P09601 288 aa8.68□□□□□ -1.02
PTPRE-206ENST00000467366 BRD2P25440 801 aaKnown RBP8.68□□□□□ -1.02
PTPRE-206ENST00000467366 C3orf67Q6ZVT6 689 aa8.68□□□□□ -1.02
PTPRE-206ENST00000467366 SUPT20HQ8NEM7 779 aa8.68□□□□□ -1.02
PTPRE-206ENST00000467366 DPF2Q92785 391 aa8.68□□□□□ -1.02
PTPRE-206ENST00000467366 ARMC5Q96C12 935 aa8.68□□□□□ -1.02
PTPRE-206ENST00000467366 GGA3Q9NZ52 723 aa8.68□□□□□ -1.02
PTPRE-206ENST00000467366 PTPN22Q9Y2R2 807 aa8.68□□□□□ -1.02
PTPRE-206ENST00000467366 ATP6V0A2Q9Y487 856 aa8.68□□□□□ -1.02
PTPRE-206ENST00000467366 DUOX1Q9NRD9 1551 aa8.68□□□□□ -1.02
PTPRE-206ENST00000467366 RANBP2P49792 3224 aaKnown RBP8.67□□□□□ -1.02
PTPRE-206ENST00000467366 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 UBE2Q2LH0YL09 131 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 PSMD14O00487 310 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 SOX1O00570 391 aaPredicted RBP8.67□□□□□ -1.02
PTPRE-206ENST00000467366 RGL2O15211 777 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 ZEB1P37275 1124 aaPredicted RBP8.67□□□□□ -1.02
PTPRE-206ENST00000467366 LAMB2P55268 1798 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 TEFQ10587 303 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
PTPRE-206ENST00000467366 CDCA8Q53HL2 280 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 NBPF10Q6P3W6 841 aaKnown RBP8.67□□□□□ -1.02
PTPRE-206ENST00000467366 KDM3BQ7LBC6 1761 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 SULF1Q8IWU6 871 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 IL17REQ8NFR9 667 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 NYXQ9GZU5 481 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 PRO3102Q9H379 93 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 UNC80Q8N2C7 3258 aa8.67□□□□□ -1.02
PTPRE-206ENST00000467366 CLSPNQ9HAW4 1339 aa8.66□□□□□ -1.02
PTPRE-206ENST00000467366 CDK11BP21127 795 aaKnown RBP8.66□□□□□ -1.02
PTPRE-206ENST00000467366 FKBP1BP68106 108 aa8.66□□□□□ -1.02
PTPRE-206ENST00000467366 DPP8Q6V1X1 898 aaPredicted RBP8.66□□□□□ -1.02
PTPRE-206ENST00000467366 LRCH3Q96II8 777 aa8.66□□□□□ -1.02
PTPRE-206ENST00000467366 TMEM106CQ9BVX2 250 aa8.66□□□□□ -1.02
PTPRE-206ENST00000467366 UBN2Q6ZU65 1347 aa8.65□□□□□ -1.02
PTPRE-206ENST00000467366 CAP1Q01518 475 aa8.65□□□□□ -1.02
PTPRE-206ENST00000467366 KIF4BQ2VIQ3 1234 aa8.65□□□□□ -1.02
PTPRE-206ENST00000467366 MPNDQ8N594 471 aa8.65□□□□□ -1.02
PTPRE-206ENST00000467366 ZNF333Q96JL9 665 aa8.65□□□□□ -1.02
PTPRE-206ENST00000467366 TMX4Q9H1E5 349 aaPredicted RBP8.65□□□□□ -1.02
PTPRE-206ENST00000467366 KCNQ5Q9NR82 932 aa8.65□□□□□ -1.02
PTPRE-206ENST00000467366 SCAF8Q9UPN6 1271 aaKnown RBP8.65□□□□□ -1.02
PTPRE-206ENST00000467366 TAF1P21675 1872 aa8.65□□□□□ -1.02
PTPRE-206ENST00000467366 DDX60Q8IY21 1712 aaKnown RBP8.65□□□□□ -1.03
PTPRE-206ENST00000467366 ZNF609O15014 1411 aa8.64□□□□□ -1.03
PTPRE-206ENST00000467366 ABCC4O15439 1325 aa8.64□□□□□ -1.03
PTPRE-206ENST00000467366 LRRC37AA6NMS7 1700 aa8.64□□□□□ -1.03
PTPRE-206ENST00000467366 SREBF2Q12772 1141 aa8.64□□□□□ -1.03
PTPRE-206ENST00000467366 ANGEL2Q5VTE6 544 aaKnown RBP8.64□□□□□ -1.03
PTPRE-206ENST00000467366 SUSD4Q5VX71 490 aa8.64□□□□□ -1.03
PTPRE-206ENST00000467366 SP8Q8IXZ3 490 aa8.64□□□□□ -1.03
PTPRE-206ENST00000467366 CD99L2Q8TCZ2 262 aa8.64□□□□□ -1.03
PTPRE-206ENST00000467366 LAMB4A4D0S4 1761 aa8.63□□□□□ -1.03
PTPRE-206ENST00000467366 LAMB1P07942 1786 aa8.63□□□□□ -1.03
PTPRE-206ENST00000467366 CEP290O15078 2479 aa8.63□□□□□ -1.03
PTPRE-206ENST00000467366 RTL9Q8NET4 1388 aa8.63□□□□□ -1.03
PTPRE-206ENST00000467366 IBTKQ9P2D0 1353 aaPredicted RBP8.63□□□□□ -1.03
PTPRE-206ENST00000467366 BTBD11A6QL63 1104 aa8.63□□□□□ -1.03
PTPRE-206ENST00000467366 GPTP24298 496 aa8.63□□□□□ -1.03
PTPRE-206ENST00000467366 RPS12P25398 132 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms