RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 CRY2Q49AN0 593 aa18.41■□□□□ 0.54
DDX56-208ENST00000467318 EPHA10Q5JZY3 1008 aa18.41■□□□□ 0.54
DDX56-208ENST00000467318 LMBR1LQ6UX01 489 aa18.41■□□□□ 0.54
DDX56-208ENST00000467318 RPAP2Q8IXW5 612 aaPredicted RBP18.41■□□□□ 0.54
DDX56-208ENST00000467318 CD2APQ9Y5K6 639 aa18.41■□□□□ 0.54
DDX56-208ENST00000467318 LAMB2P55268 1798 aa18.41■□□□□ 0.54
DDX56-208ENST00000467318 CCDC136Q96JN2 1154 aa18.41■□□□□ 0.54
DDX56-208ENST00000467318 C1orf115Q9H7X2 142 aa18.41■□□□□ 0.54
DDX56-208ENST00000467318 TGFB2P61812 414 aa18.4■□□□□ 0.54
DDX56-208ENST00000467318 C3orf67Q6ZVT6 689 aa18.4■□□□□ 0.54
DDX56-208ENST00000467318 ANKRD44Q8N8A2 993 aa18.4■□□□□ 0.54
DDX56-208ENST00000467318 MYH3P11055 1940 aa18.4■□□□□ 0.54
DDX56-208ENST00000467318 RTL9Q8NET4 1388 aa18.39■□□□□ 0.53
DDX56-208ENST00000467318 TNRC6CQ9HCJ0 1690 aaKnown RBP18.38■□□□□ 0.53
DDX56-208ENST00000467318 H0YIN7 160 aa18.38■□□□□ 0.53
DDX56-208ENST00000467318 ATP8B2P98198 1209 aa18.38■□□□□ 0.53
DDX56-208ENST00000467318 CEP85Q6P2H3 762 aa18.38■□□□□ 0.53
DDX56-208ENST00000467318 RPGRQ92834 1020 aaKnown RBP18.38■□□□□ 0.53
DDX56-208ENST00000467318 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
DDX56-208ENST00000467318 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
DDX56-208ENST00000467318 SRGNP10124 158 aa18.38■□□□□ 0.53
DDX56-208ENST00000467318 IFIT5Q13325 482 aaKnown RBP18.38■□□□□ 0.53
DDX56-208ENST00000467318 CCDC57Q2TAC2 916 aa18.38■□□□□ 0.53
DDX56-208ENST00000467318 DDX46Q7L014 1031 aaKnown RBP18.38■□□□□ 0.53
DDX56-208ENST00000467318 KLHL34Q8N239 644 aa18.38■□□□□ 0.53
DDX56-208ENST00000467318 GREM2Q9H772 168 aa18.38■□□□□ 0.53
DDX56-208ENST00000467318 PPP1R1BQ9UD71 204 aaPredicted RBP18.38■□□□□ 0.53
DDX56-208ENST00000467318 ANKRD31Q8N7Z5 1873 aa18.37■□□□□ 0.53
DDX56-208ENST00000467318 KIF13BQ9NQT8 1826 aa18.37■□□□□ 0.53
DDX56-208ENST00000467318 NPR1P16066 1061 aa18.37■□□□□ 0.53
DDX56-208ENST00000467318 ITGA6P23229 1130 aa18.37■□□□□ 0.53
DDX56-208ENST00000467318 HOXA10P31260 410 aaPredicted RBP18.37■□□□□ 0.53
DDX56-208ENST00000467318 MASTLQ96GX5 879 aa18.37■□□□□ 0.53
DDX56-208ENST00000467318 RBM17Q96I25 401 aaKnown RBP18.37■□□□□ 0.53
DDX56-208ENST00000467318 ANKRD18BA2A2Z9 1011 aa18.36■□□□□ 0.53
DDX56-208ENST00000467318 HMMRO75330 724 aa18.36■□□□□ 0.53
DDX56-208ENST00000467318 ALDH1B1P30837 517 aa18.36■□□□□ 0.53
DDX56-208ENST00000467318 FAM161AQ3B820 660 aa18.36■□□□□ 0.53
DDX56-208ENST00000467318 C2CD5Q86YS7 1000 aa18.36■□□□□ 0.53
DDX56-208ENST00000467318 CCDC85AQ96PX6 553 aaPredicted RBP18.36■□□□□ 0.53
DDX56-208ENST00000467318 PCDHB15Q9Y5E8 787 aa18.36■□□□□ 0.53
DDX56-208ENST00000467318 SSH3Q8TE77 659 aa18.35■□□□□ 0.53
DDX56-208ENST00000467318 CRAMP1Q96RY5 1269 aa18.35■□□□□ 0.53
DDX56-208ENST00000467318 CDC5LQ99459 802 aaKnown RBP18.35■□□□□ 0.53
DDX56-208ENST00000467318 GOLGB1Q14789 3259 aaKnown RBP18.35■□□□□ 0.53
DDX56-208ENST00000467318 PNMA6EA0A0J9YXQ4 647 aa18.34■□□□□ 0.53
DDX56-208ENST00000467318 STYK1Q6J9G0 422 aa18.34■□□□□ 0.53
DDX56-208ENST00000467318 POLA2Q14181 598 aa18.34■□□□□ 0.53
DDX56-208ENST00000467318 GRAPQ13588 217 aa18.33■□□□□ 0.52
DDX56-208ENST00000467318 TAF7LQ5H9L4 462 aa18.33■□□□□ 0.52
DDX56-208ENST00000467318 SIRT2Q8IXJ6 389 aa18.33■□□□□ 0.52
DDX56-208ENST00000467318 GRAPLQ8TC17 118 aaPredicted RBP18.33■□□□□ 0.52
DDX56-208ENST00000467318 CNKSR1Q969H4 720 aa18.33■□□□□ 0.52
DDX56-208ENST00000467318 SEC31BQ9NQW1 1179 aa18.33■□□□□ 0.52
DDX56-208ENST00000467318 BBOX1O75936 387 aa18.32■□□□□ 0.52
DDX56-208ENST00000467318 CHRNA5P30532 468 aa18.32■□□□□ 0.52
DDX56-208ENST00000467318 RFX5P48382 616 aaPredicted RBP18.32■□□□□ 0.52
DDX56-208ENST00000467318 RPS8P62241 208 aaKnown RBP18.32■□□□□ 0.52
DDX56-208ENST00000467318 ANKRD18AQ8IVF6 992 aa18.32■□□□□ 0.52
DDX56-208ENST00000467318 ZNF622Q969S3 477 aaKnown RBP eCLIP18.32■□□□□ 0.528e-7■■■□□ 14.9
DDX56-208ENST00000467318 FHDC1Q9C0D6 1143 aaPredicted RBP18.32■□□□□ 0.52
DDX56-208ENST00000467318 COPRSQ9NQ92 184 aa18.32■□□□□ 0.52
DDX56-208ENST00000467318 FBXO3Q9UK99 471 aa18.32■□□□□ 0.52
DDX56-208ENST00000467318 WWC3Q9ULE0 1092 aa18.32■□□□□ 0.52
DDX56-208ENST00000467318 COL4A1P02462 1669 aa18.32■□□□□ 0.52
DDX56-208ENST00000467318 A0A0G2JLW4 131 aa18.31■□□□□ 0.52
DDX56-208ENST00000467318 DPEP1P16444 411 aa18.31■□□□□ 0.52
DDX56-208ENST00000467318 IGHMBP2P38935 993 aaKnown RBP18.31■□□□□ 0.52
DDX56-208ENST00000467318 PTPN12Q05209 780 aaKnown RBP18.31■□□□□ 0.52
DDX56-208ENST00000467318 NLGN2Q8NFZ4 835 aa18.31■□□□□ 0.52
DDX56-208ENST00000467318 MPHOSPH8Q99549 860 aa18.31■□□□□ 0.52
DDX56-208ENST00000467318 COL11A2P13942 1736 aaPredicted RBP18.31■□□□□ 0.52
DDX56-208ENST00000467318 KCNA3P22001 575 aa18.31■□□□□ 0.52
DDX56-208ENST00000467318 HDAC1Q13547 482 aaPredicted RBP18.31■□□□□ 0.52
DDX56-208ENST00000467318 TMC4Q7Z404 712 aa18.31■□□□□ 0.52
DDX56-208ENST00000467318 LRP5O75197 1615 aa18.3■□□□□ 0.52
DDX56-208ENST00000467318 SLC51AQ86UW1 340 aa18.3■□□□□ 0.52
DDX56-208ENST00000467318 CELF1Q92879 486 aaKnown RBP18.3■□□□□ 0.52
DDX56-208ENST00000467318 SYT17Q9BSW7 474 aa18.3■□□□□ 0.52
DDX56-208ENST00000467318 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
DDX56-208ENST00000467318 BSDC1Q9NW68 430 aaPredicted RBP18.3■□□□□ 0.52
DDX56-208ENST00000467318 PIM2Q9P1W9 311 aa18.3■□□□□ 0.52
DDX56-208ENST00000467318 TAF1P21675 1872 aa18.29■□□□□ 0.52
DDX56-208ENST00000467318 LDHAL6AQ6ZMR3 332 aa18.29■□□□□ 0.52
DDX56-208ENST00000467318 TTLL6Q8N841 843 aa18.29■□□□□ 0.52
DDX56-208ENST00000467318 KIAA1551Q9HCM1 1747 aa18.29■□□□□ 0.52
DDX56-208ENST00000467318 HSP90AB4PQ58FF6 505 aa18.28■□□□□ 0.52
DDX56-208ENST00000467318 ZNF594Q96JF6 807 aaPredicted RBP18.28■□□□□ 0.52
DDX56-208ENST00000467318 NOP58Q9Y2X3 529 aaKnown RBP18.28■□□□□ 0.52
DDX56-208ENST00000467318 CIAO1O76071 339 aa18.28■□□□□ 0.52
DDX56-208ENST00000467318 KLHDC4Q8TBB5 520 aa18.28■□□□□ 0.52
DDX56-208ENST00000467318 PA2G4Q9UQ80 394 aaKnown RBP18.28■□□□□ 0.52
DDX56-208ENST00000467318 EYA2O00167 538 aa18.27■□□□□ 0.52
DDX56-208ENST00000467318 SURF6O75683 361 aaKnown RBP18.27■□□□□ 0.52
DDX56-208ENST00000467318 G3BP1Q13283 466 aaKnown RBP eCLIP18.27■□□□□ 0.525e-8■□□□□ 8.8
DDX56-208ENST00000467318 PRPF40BQ6NWY9 871 aaKnown RBP18.27■□□□□ 0.52
DDX56-208ENST00000467318 CNNM1Q9NRU3 951 aa18.27■□□□□ 0.52
DDX56-208ENST00000467318 DLEC1Q9Y238 1755 aa18.27■□□□□ 0.51
DDX56-208ENST00000467318 TMX4Q9H1E5 349 aaPredicted RBP18.26■□□□□ 0.51
DDX56-208ENST00000467318 DCTPP1Q9H773 170 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms