RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 CKAP2LQ8IYA6 745 aa18.32■□□□□ 0.52
CHD1L-205ENST00000467213 GOLGA6L19H0YKK7 550 aa18.31■□□□□ 0.52
CHD1L-205ENST00000467213 TERF2Q15554 542 aa18.31■□□□□ 0.52
CHD1L-205ENST00000467213 PTPN14Q15678 1187 aa18.31■□□□□ 0.52
CHD1L-205ENST00000467213 NAA16Q6N069 864 aaPredicted RBP18.31■□□□□ 0.52
CHD1L-205ENST00000467213 LARP1Q6PKG0 1096 aaKnown RBP18.31■□□□□ 0.52
CHD1L-205ENST00000467213 RCOR1Q9UKL0 485 aa18.31■□□□□ 0.52
CHD1L-205ENST00000467213 RGPD8O14715 1765 aaPredicted RBP18.31■□□□□ 0.52
CHD1L-205ENST00000467213 CCDC66A2RUB6 948 aa18.31■□□□□ 0.52
CHD1L-205ENST00000467213 OS9Q13438 667 aaPredicted RBP18.31■□□□□ 0.52
CHD1L-205ENST00000467213 OSBPL5Q9H0X9 879 aaPredicted RBP18.31■□□□□ 0.52
CHD1L-205ENST00000467213 PI4KAP2A4QPH2 592 aa18.3■□□□□ 0.52
CHD1L-205ENST00000467213 NMIQ13287 307 aaPredicted RBP18.3■□□□□ 0.52
CHD1L-205ENST00000467213 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
CHD1L-205ENST00000467213 CCDC144CPQ8IYA2 1237 aa18.3■□□□□ 0.52
CHD1L-205ENST00000467213 PI4KAP1Q8N8J0 262 aa18.3■□□□□ 0.52
CHD1L-205ENST00000467213 DNAJC25Q9H1X3 360 aa18.3■□□□□ 0.52
CHD1L-205ENST00000467213 SMARCC2Q8TAQ2 1214 aa18.3■□□□□ 0.52
CHD1L-205ENST00000467213 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
CHD1L-205ENST00000467213 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
CHD1L-205ENST00000467213 L2HGDHQ9H9P8 463 aa18.3■□□□□ 0.52
CHD1L-205ENST00000467213 CCZ1BP86790 482 aa18.29■□□□□ 0.52
CHD1L-205ENST00000467213 CCZ1P86791 482 aaPredicted RBP18.29■□□□□ 0.52
CHD1L-205ENST00000467213 NECTIN2Q92692 538 aa18.29■□□□□ 0.52
CHD1L-205ENST00000467213 BPIFA3Q9BQP9 254 aa18.29■□□□□ 0.52
CHD1L-205ENST00000467213 DBF4Q9UBU7 674 aaPredicted RBP18.29■□□□□ 0.52
CHD1L-205ENST00000467213 KCNJ4P48050 445 aa18.29■□□□□ 0.52
CHD1L-205ENST00000467213 ZNF771Q7L3S4 317 aaPredicted RBP18.29■□□□□ 0.52
CHD1L-205ENST00000467213 BICD2Q8TD16 824 aa18.29■□□□□ 0.52
CHD1L-205ENST00000467213 ANO10Q9NW15 660 aa18.29■□□□□ 0.52
CHD1L-205ENST00000467213 FERMT3Q86UX7 667 aa18.28■□□□□ 0.52
CHD1L-205ENST00000467213 CCAR2Q8N163 923 aaKnown RBP18.28■□□□□ 0.52
CHD1L-205ENST00000467213 LTN1O94822 1766 aa18.28■□□□□ 0.52
CHD1L-205ENST00000467213 SLU7O95391 586 aaKnown RBP18.28■□□□□ 0.52
CHD1L-205ENST00000467213 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.52
CHD1L-205ENST00000467213 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
CHD1L-205ENST00000467213 PSDA5PKW4 1024 aaPredicted RBP18.27■□□□□ 0.51
CHD1L-205ENST00000467213 SKILP12757 684 aa18.27■□□□□ 0.51
CHD1L-205ENST00000467213 KMT5BQ4FZB7 885 aa18.27■□□□□ 0.51
CHD1L-205ENST00000467213 KSR2Q6VAB6 950 aa18.27■□□□□ 0.51
CHD1L-205ENST00000467213 AACSQ86V21 672 aa18.27■□□□□ 0.51
CHD1L-205ENST00000467213 RGS22Q8NE09 1264 aa18.27■□□□□ 0.51
CHD1L-205ENST00000467213 ADAMTS7Q9UKP4 1686 aa18.27■□□□□ 0.51
CHD1L-205ENST00000467213 ADD1P35611 737 aaKnown RBP18.26■□□□□ 0.51
CHD1L-205ENST00000467213 FAM227BQ96M60 508 aa18.26■□□□□ 0.51
CHD1L-205ENST00000467213 NAT10Q9H0A0 1025 aaKnown RBP18.26■□□□□ 0.51
CHD1L-205ENST00000467213 TFIP11Q9UBB9 837 aaKnown RBP18.26■□□□□ 0.51
CHD1L-205ENST00000467213 ABCC6O95255 1503 aa18.26■□□□□ 0.51
CHD1L-205ENST00000467213 TAF5LO75529 589 aa18.25■□□□□ 0.51
CHD1L-205ENST00000467213 HMGB1P09429 215 aaKnown RBP18.25■□□□□ 0.51
CHD1L-205ENST00000467213 FAM173BQ6P4H8 233 aa18.25■□□□□ 0.51
CHD1L-205ENST00000467213 ENGASEQ8NFI3 743 aa18.25■□□□□ 0.51
CHD1L-205ENST00000467213 H2AFXP16104 143 aaPredicted RBP18.25■□□□□ 0.51
CHD1L-205ENST00000467213 ZNF215Q9UL58 517 aaPredicted RBP18.25■□□□□ 0.51
CHD1L-205ENST00000467213 A0A0D9SFI3 127 aa18.25■□□□□ 0.51
CHD1L-205ENST00000467213 SASH1O94885 1247 aa18.25■□□□□ 0.51
CHD1L-205ENST00000467213 DHX40Q8IX18 779 aaKnown RBP18.25■□□□□ 0.51
CHD1L-205ENST00000467213 CCDC150Q8NCX0 1101 aa18.25■□□□□ 0.51
CHD1L-205ENST00000467213 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
CHD1L-205ENST00000467213 COL15A1P39059 1388 aa18.24■□□□□ 0.51
CHD1L-205ENST00000467213 CCDC69A6NI79 296 aa18.24■□□□□ 0.51
CHD1L-205ENST00000467213 FAM160A1Q05DH4 1040 aa18.24■□□□□ 0.51
CHD1L-205ENST00000467213 LINS1Q8NG48 757 aa18.24■□□□□ 0.51
CHD1L-205ENST00000467213 BRF1Q92994 677 aa18.24■□□□□ 0.51
CHD1L-205ENST00000467213 LAMA4Q16363 1823 aa18.24■□□□□ 0.51
CHD1L-205ENST00000467213 ARHGAP23Q9P227 1491 aa18.24■□□□□ 0.51
CHD1L-205ENST00000467213 PFKFB2O60825 505 aa18.24■□□□□ 0.51
CHD1L-205ENST00000467213 G3BP1Q13283 466 aaKnown RBP eCLIP18.24■□□□□ 0.512e-7■□□□□ 8.3
CHD1L-205ENST00000467213 SNW1Q13573 536 aaKnown RBP18.24■□□□□ 0.51
CHD1L-205ENST00000467213 CCDC93Q567U6 631 aa18.24■□□□□ 0.51
CHD1L-205ENST00000467213 CEP57L1Q8IYX8 460 aa18.24■□□□□ 0.51
CHD1L-205ENST00000467213 EAF2Q96CJ1 260 aaPredicted RBP18.24■□□□□ 0.51
CHD1L-205ENST00000467213 ZNF396Q96N95 335 aaPredicted RBP18.24■□□□□ 0.51
CHD1L-205ENST00000467213 C9orf78Q9NZ63 289 aaPredicted RBP18.24■□□□□ 0.51
CHD1L-205ENST00000467213 NUTM2FA1L443 756 aa18.23■□□□□ 0.51
CHD1L-205ENST00000467213 BMS1Q14692 1282 aaKnown RBP18.23■□□□□ 0.51
CHD1L-205ENST00000467213 TPRNQ4KMQ1 711 aa18.23■□□□□ 0.51
CHD1L-205ENST00000467213 NUTM2GQ5VZR2 741 aa18.23■□□□□ 0.51
CHD1L-205ENST00000467213 NEK1Q96PY6 1258 aa18.23■□□□□ 0.51
CHD1L-205ENST00000467213 AGXT2Q9BYV1 514 aa18.23■□□□□ 0.51
CHD1L-205ENST00000467213 CCP110O43303 1012 aa18.23■□□□□ 0.51
CHD1L-205ENST00000467213 SLC20A2Q08357 652 aa18.23■□□□□ 0.51
CHD1L-205ENST00000467213 C11orf57Q6ZUT1 292 aaPredicted RBP18.23■□□□□ 0.51
CHD1L-205ENST00000467213 CHMP3Q9Y3E7 222 aa18.23■□□□□ 0.51
CHD1L-205ENST00000467213 ERBB3P21860 1342 aa18.22■□□□□ 0.51
CHD1L-205ENST00000467213 CCDC73Q6ZRK6 1079 aa18.22■□□□□ 0.51
CHD1L-205ENST00000467213 NFAT5O94916 1531 aa18.22■□□□□ 0.51
CHD1L-205ENST00000467213 BECN2A8MW95 431 aa18.22■□□□□ 0.51
CHD1L-205ENST00000467213 ATP8B1O43520 1251 aa18.22■□□□□ 0.51
CHD1L-205ENST00000467213 AKAP4Q5JQC9 854 aa18.22■□□□□ 0.51
CHD1L-205ENST00000467213 NGDNQ8NEJ9 315 aaKnown RBP18.22■□□□□ 0.51
CHD1L-205ENST00000467213 FSD1Q9BTV5 496 aa18.22■□□□□ 0.51
CHD1L-205ENST00000467213 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
CHD1L-205ENST00000467213 CAMTA1Q9Y6Y1 1673 aa18.21■□□□□ 0.51
CHD1L-205ENST00000467213 A0A1W2PQ27 194 aa18.21■□□□□ 0.51
CHD1L-205ENST00000467213 A0A1W2PQ64 194 aa18.21■□□□□ 0.51
CHD1L-205ENST00000467213 A0A1W2PQD8 194 aa18.21■□□□□ 0.51
CHD1L-205ENST00000467213 H3BQV1 296 aa18.21■□□□□ 0.51
CHD1L-205ENST00000467213 ATP5JP18859 108 aa18.21■□□□□ 0.51
CHD1L-205ENST00000467213 IFFO2Q5TF58 517 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms