RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 PGBD1Q96JS3 809 aa17.69■□□□□ 0.42
RRP1-201ENST00000467112 HDAC5Q9UQL6 1122 aa17.69■□□□□ 0.42
RRP1-201ENST00000467112 MED23Q9ULK4 1368 aa17.69■□□□□ 0.42
RRP1-201ENST00000467112 PDIA4P13667 645 aaKnown RBP17.68■□□□□ 0.42
RRP1-201ENST00000467112 BICD2Q8TD16 824 aa17.68■□□□□ 0.42
RRP1-201ENST00000467112 DDX11Q96FC9 970 aa17.68■□□□□ 0.42
RRP1-201ENST00000467112 C1orf141Q5JVX7 400 aa17.68■□□□□ 0.42
RRP1-201ENST00000467112 CLSTN2Q9H4D0 955 aa17.68■□□□□ 0.42
RRP1-201ENST00000467112 DDX19AQ9NUU7 478 aaKnown RBP17.68■□□□□ 0.42
RRP1-201ENST00000467112 PDCL2Q8N4E4 241 aa17.67■□□□□ 0.42
RRP1-201ENST00000467112 DNAJC25Q9H1X3 360 aa17.67■□□□□ 0.42
RRP1-201ENST00000467112 CHD2O14647 1828 aaKnown RBP17.67■□□□□ 0.42
RRP1-201ENST00000467112 PXDNQ92626 1479 aa17.67■□□□□ 0.42
RRP1-201ENST00000467112 C16orf45Q96MC5 204 aaPredicted RBP17.67■□□□□ 0.42
RRP1-201ENST00000467112 NDUFB9Q9Y6M9 179 aa17.67■□□□□ 0.42
RRP1-201ENST00000467112 ARHGAP23Q9P227 1491 aa17.67■□□□□ 0.42
RRP1-201ENST00000467112 TAF5LO75529 589 aa17.66■□□□□ 0.42
RRP1-201ENST00000467112 CHGBP05060 677 aa17.66■□□□□ 0.42
RRP1-201ENST00000467112 ZSCAN20P17040 1043 aaPredicted RBP17.66■□□□□ 0.42
RRP1-201ENST00000467112 ZNF75DP51815 510 aa17.66■□□□□ 0.42
RRP1-201ENST00000467112 ZNF165P49910 485 aa17.66■□□□□ 0.42
RRP1-201ENST00000467112 RBM43Q6ZSC3 357 aaKnown RBP17.66■□□□□ 0.42
RRP1-201ENST00000467112 SPDYE4A6NLX3 237 aa17.66■□□□□ 0.42
RRP1-201ENST00000467112 IGKV5-2P06315 115 aa17.66■□□□□ 0.42
RRP1-201ENST00000467112 PLA2G4DQ86XP0 818 aa17.66■□□□□ 0.42
RRP1-201ENST00000467112 BRF1Q92994 677 aa17.66■□□□□ 0.42
RRP1-201ENST00000467112 RGPD2P0DJD1 1756 aa17.65■□□□□ 0.42
RRP1-201ENST00000467112 ALDH8A1Q9H2A2 487 aaPredicted RBP17.65■□□□□ 0.42
RRP1-201ENST00000467112 UTYO14607 1347 aa17.65■□□□□ 0.42
RRP1-201ENST00000467112 ZSCAN25Q6NSZ9 544 aa17.65■□□□□ 0.42
RRP1-201ENST00000467112 HMG20BQ9P0W2 317 aa17.65■□□□□ 0.42
RRP1-201ENST00000467112 COL15A1P39059 1388 aa17.65■□□□□ 0.42
RRP1-201ENST00000467112 CTIFO43310 598 aaKnown RBP17.64■□□□□ 0.41
RRP1-201ENST00000467112 CEBPZQ03701 1054 aaKnown RBP17.64■□□□□ 0.41
RRP1-201ENST00000467112 EPHA10Q5JZY3 1008 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 TDRD7Q8NHU6 1098 aaKnown RBP17.64■□□□□ 0.41
RRP1-201ENST00000467112 GTF3C6Q969F1 213 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 ZHX1Q9UKY1 873 aaPredicted RBP17.64■□□□□ 0.41
RRP1-201ENST00000467112 USP54Q70EL1 1684 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 DDX58O95786 925 aaKnown RBP17.64■□□□□ 0.41
RRP1-201ENST00000467112 AMOTQ4VCS5 1084 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 RIC3Q7Z5B4 369 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 THEMISQ8N1K5 641 aaPredicted RBP17.64■□□□□ 0.41
RRP1-201ENST00000467112 ANKRD7Q92527 254 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 HEG1Q9ULI3 1381 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 NFAT5O94916 1531 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 RESTQ13127 1097 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 TSGA10IPQ3SY00 556 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 CCDC129Q6ZRS4 1044 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 LRRC2Q9BYS8 371 aa17.64■□□□□ 0.41
RRP1-201ENST00000467112 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.41
RRP1-201ENST00000467112 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.63■□□□□ 0.41
RRP1-201ENST00000467112 U2AF2P26368 475 aaKnown RBP eCLIP17.63■□□□□ 0.41
RRP1-201ENST00000467112 PDIA6Q15084 440 aa17.63■□□□□ 0.41
RRP1-201ENST00000467112 NEK1Q96PY6 1258 aa17.63■□□□□ 0.41
RRP1-201ENST00000467112 HSP90B1P14625 803 aaKnown RBP17.63■□□□□ 0.41
RRP1-201ENST00000467112 PSME1Q06323 249 aa17.63■□□□□ 0.41
RRP1-201ENST00000467112 Q6ZUG5 572 aa17.63■□□□□ 0.41
RRP1-201ENST00000467112 CACTINQ8WUQ7 758 aaKnown RBP17.63■□□□□ 0.41
RRP1-201ENST00000467112 SEC62Q99442 399 aaKnown RBP17.63■□□□□ 0.41
RRP1-201ENST00000467112 ADGRL3Q9HAR2 1447 aa17.63■□□□□ 0.41
RRP1-201ENST00000467112 CLIP2Q9UDT6 1046 aa17.63■□□□□ 0.41
RRP1-201ENST00000467112 LMO7Q8WWI1 1683 aa17.62■□□□□ 0.41
RRP1-201ENST00000467112 H3BQV1 296 aa17.62■□□□□ 0.41
RRP1-201ENST00000467112 MYL6BP14649 208 aa17.62■□□□□ 0.41
RRP1-201ENST00000467112 DMTNQ08495 405 aa17.62■□□□□ 0.41
RRP1-201ENST00000467112 CCDC144BQ3MJ40 725 aa17.62■□□□□ 0.41
RRP1-201ENST00000467112 IFFO2Q5TF58 517 aa17.62■□□□□ 0.41
RRP1-201ENST00000467112 CCDC144CPQ8IYA2 1237 aa17.62■□□□□ 0.41
RRP1-201ENST00000467112 JCADQ9P266 1359 aa17.62■□□□□ 0.41
RRP1-201ENST00000467112 FOSBP53539 338 aa17.62■□□□□ 0.41
RRP1-201ENST00000467112 USPL1Q5W0Q7 1092 aa17.62■□□□□ 0.41
RRP1-201ENST00000467112 DBNLQ9UJU6 430 aaKnown RBP17.62■□□□□ 0.41
RRP1-201ENST00000467112 TNNT1P13805 278 aa17.61■□□□□ 0.41
RRP1-201ENST00000467112 SLC39A6Q13433 755 aa17.61■□□□□ 0.41
RRP1-201ENST00000467112 KCNH5Q8NCM2 988 aa17.61■□□□□ 0.41
RRP1-201ENST00000467112 KRT32Q14532 448 aa17.61■□□□□ 0.41
RRP1-201ENST00000467112 ESCO1Q5FWF5 840 aa17.61■□□□□ 0.41
RRP1-201ENST00000467112 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.61■□□□□ 0.41
RRP1-201ENST00000467112 FTOQ9C0B1 505 aaKnown RBP eCLIP17.61■□□□□ 0.41
RRP1-201ENST00000467112 NEURL1BA8MQ27 555 aa17.6■□□□□ 0.41
RRP1-201ENST00000467112 CYP21A2P08686 494 aa17.6■□□□□ 0.41
RRP1-201ENST00000467112 NCBP1Q09161 790 aaKnown RBP17.6■□□□□ 0.41
RRP1-201ENST00000467112 DNAJC2Q99543 621 aaKnown RBP17.6■□□□□ 0.41
RRP1-201ENST00000467112 A0A087WWV3 80 aa17.59■□□□□ 0.41
RRP1-201ENST00000467112 SCRN1Q12765 414 aa17.59■□□□□ 0.41
RRP1-201ENST00000467112 GCKRQ14397 625 aa17.59■□□□□ 0.41
RRP1-201ENST00000467112 C11orf57Q6ZUT1 292 aaPredicted RBP17.59■□□□□ 0.41
RRP1-201ENST00000467112 MYD88Q99836 296 aa17.59■□□□□ 0.41
RRP1-201ENST00000467112 NEXNQ0ZGT2 675 aa17.59■□□□□ 0.41
RRP1-201ENST00000467112 TFCP2Q12800 502 aa17.59■□□□□ 0.41
RRP1-201ENST00000467112 NAA30Q147X3 362 aaPredicted RBP17.59■□□□□ 0.41
RRP1-201ENST00000467112 BCL11BQ9C0K0 894 aaPredicted RBP17.59■□□□□ 0.41
RRP1-201ENST00000467112 PPFIA3O75145 1194 aa17.58■□□□□ 0.41
RRP1-201ENST00000467112 ARID5BQ14865 1188 aa17.58■□□□□ 0.41
RRP1-201ENST00000467112 ANKRD24Q8TF21 1146 aa17.58■□□□□ 0.41
RRP1-201ENST00000467112 XAGE3Q8WTP9 111 aa17.58■□□□□ 0.41
RRP1-201ENST00000467112 CCDC9Q9Y3X0 531 aaKnown RBP17.58■□□□□ 0.41
RRP1-201ENST00000467112 ATP5JP18859 108 aa17.58■□□□□ 0.4
RRP1-201ENST00000467112 FGD1P98174 961 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms